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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12040#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1961 fasta sequence
[CACTGAACCACCTGCAAGACGGAGGTGG-TTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGGTATCAATAATCCTCCTTGTCTTAATTAGTTAGCTTTCTCTTGATTCATGCTGTTAATTATGTCTGGTTTCTGCAAGTAGATGAAAGATATGTGCTTTGTTGACATATCCATAACAGTACAGCTTACTACTGAGTTTACATAGCGCTAGCCAATTGAGTAGAAAGACTGAAAGAGCAAGAGTACCAATTAAAGCACCTATAAGTAGGATTTGAAGAACCAATTTCAGTTTGCAGTCAAAATAGCATCACATCAGCTTGAGGCACCACTTCCTTTTTTCTAGCCTGGAGTCTTTGCTTGTTTTAGCACCTCGGTTAAACTAGTACAACTAGAATCAACATGGTGAATGGACGTAAATATGGTGGTAGTGTAACCACAAATTTGTATTGGTCATGTAGTATCCTTCCCCTGAAAACATTTTCAGGGGAAGTCTGAATTTTCTTTGTCGATACTATAACTAACTTAAGAAAAAAATGAAGAAATGACAGCGAGGGTGGGAGCCAAATGACAACCAAAATCGAATCTTTTCGGCTCGATCATTTCTCTTCTTTTCCAACTCTTTTCGCCGCCTTGAATTAAAATATACAGGACAGTCAATGATCCGTCGCCACCAGAAGAAAAGAGTTTTGTTAGGTACACACTTTTGTCGACGGCTAATTGTTGCCGGGCGGCACGCAGGTGCAGCGATCGATCTTATCACCACACAAGCGTTTTTCCAATGCTTTGTCCTGACCGACAATTTTTTTTGTACAAATCCATTATTAGCGGCAAAAACTCCGTCCAAGATGGCATATTTTCCTAAGAAAAAAAAAACTCTTCCTATTGAGTCCTCTCGATAGCATCCTGTTCTGACTTTAAGTAGATATAATATGTGGACTTCACATTCAGCGAGTTTATATGTCAGTGATGACCAATACCAGAGAACAATACTTTGGAGAGACTTGTCTCTTTCCAATACGACCAAAGCCAGCCTTCAATCGAAGGCCGTACACGGTACACTGTTCACTGAGCCATCGCAATTTATATATGGTCTCAGTCGAAATTGATGGCCGGTTAGTGGTTCGATTGACTGCTGTCATGGAAGGCCATGATGTGAAGCTCTAACGGTAGCCATACTTCGCCTCTCCCCCGTGAAACCACCGATGCCAAACCACCATATCTATCAGCCTATCATGCGCCGCGCGCGACCACAAATGCGCCGGACAGGATGGCCGCCGAGATGGGCACCGGATCGATCGGCTAGAAAACGTCACCGATACGTGGGGTTTTTCAATGCCATTGCAAATGGCTTCCTTTTTGGCAACTTTTTCTTTTGCCATGACTTGAATCATCCAGCACCGATCGATGATATTACGGCTGCATGTAGGCACGCTCAACAGAAACTCGGTGCTGCTGTAAATAGTTTGCCTAGTTAGCTGGGCCACCTCTGGATTGTACTCTCACCGTATCAAAATAAGTATAACAGCTTAATATATGATGAGACACTAGGATACGTTACATTGCTATATTTTGATATGGAAGTAGTACTACTGTTGTACGTGATGGTCCAGTCCAACGCCCCCTGGCTTCTTCAGAAGTGGTTAGTTCTCCAGTCATCCAAAGCAGCAGTACAATCCTGGTTGTTCCCACTTGAGAAAAAATATCTTTGGTTGCTCGTCATAATAGAGGGGGGAAGGCAAGGTACCATATGCTTTGTAGGTGTTCTGTACTTAGGCACCAAGACTGGGTGTTGTGTTAATTTGTGGTCCTCGTTATAGACATCAGACAATCACTCCATTATCTTGTGTATCATGTTAACTACCAACCAAATGCATC]
[+] EMBL AK121603 [CACTGAACCACCTGCAAGACGGAGGTGG TTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGGTATCAATAATCCTCCTTGTCTTAATTAGTTAGCTTTCTCTTGATTCATGCTGTTAATTATGTCTGGTTTCTGCAAGTAGATGAAAGATATGTGCTTTGTTGACATATCCATAACAGTACAGCTTACTACTGAGTTTACATAGCGCTAGCCAATTGAGTAGAAAGACTGAAAGAGCAAGAGTACCAATTAAAGCACCTATAAGTAGGATTTGAAGAACCAATTTCAGTTTGCAGTCAAAATAGCATCACATCAGCTTGAGGCACCACTTCCTTTTTTCTAGCCTGGAGTCTTTGCTTGTTTTAGCACCTCGGTTAAACTAGTACAACTAGAATCAACATGGTGAATGGACGTAAATATGGTGGTAGTGTAACCACAAATTTGTATTGGTCATGTAGTATCCTTCCCCTGAAAACATTTTCAGGGGAAGTCTGAATTTTCTTTGTCGATACTATAACTAACTTAAGAAAAAAATGAAGAAATGACAGCGAGGGTGGGAGCCAAATGACAACCAAAATCGAATCTTTTCGGCTCGATCATTTCTCTTCTTTTCCAACTCTTTTCGCCGCCTTGAATTAAAATATACAGGACAGTCAATGATCCGTCGCCACCAGAAGAAAAGAGTTTTGTTAGGTACACACTTTTGTCGACGGCTAATTGTTGCCGGGCGGCACGCAGGTGCAGCGATCGATCTTATCACCACACAAGCGTTTTTCCAATGCTTTGTCCTGACCGACAATTTTTTTTGTACAAATCCATTATTAGCGGCAAAAACTCCGTCCAAGATGGCATATTTTCCTAAGAAAAAAAAAACTCTTCCTATTGAGTCCTCTCGATAGCATCCTGTTCTGACTTTAAGTAGATATAATATGTGGACTTCACATTCAGCGAGTTTATATGTCAGTGATGACCAATACCAGAGAACAATACTTTGGAGAGACTTGTCTCTTTCCAATACGACCAAAGCCAGCCTTCAATCGAAGGCCGTACACGGTACACTGTTCACTGAGCCATCGCAATTTATATATGGTCTCAGTCGAAATTGATGGCCGGTTAGTGGTTCGATTGACTGCTGTCATGGAAGGCCATGATGTGAAGCTCTAACGGTAGCCATACTTCGCCTCTCCCCCGTGAAACCACCGATGCCAAACCACCATATCTATCAGCCTATCATGCGCCGCGCGCGACCACAAATGCGCCGGACAGGATGGCCGCCGAGATGGGCACCGGATCGATCGGCTAGAAAACGTCACCGATACGTGGGGTTTTTCAATGCCATTGCAAATGGCTTCCTTTTTGGCAACTTTTTCTTTTGCCATGACTTGAATCATCCAGCACCGATCGATGATATTACGGCTGCATGTAGGCACGCTCAACAGAAACTCGGTGCTGCTGTAAATAGTTTGCCTAGTTAGCTGGGCCACCTCTGGATTGTACTCTCACCGTATCAAAATAAGTATAACAGCTTAATATATGATGAGACACTAGGATACGTTACATTGCTATATTTTGATATGGAAGTAGTACTACTGTTGTACGTGATGGTCCAGTCCAACGCCCCCTGGCTTCTTCAGAAGTGGTTAGTTCTCCAGTCATCCAAAGCAGCAGTACAATCCTGGTTGTTCCCACTTGAGAAAAAATATCTTTGGTTGCTCGTCATAATAGAGGGGGGAAGGCAAGGTACCATATGCTTTGTAGGTGTTCTGTACTTAGGCACCAAGACTGGGTGTTGTGTTAATTTGTGGTCCTCGTTATAGACATCAGACAATCACTCCATTATCTTGTGTATCATGTTAACTACCAACCAAATGCATC]
[+] EMBL AK069691 [CACTGAACCACCTGCAAGACGGAGGTGGTTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGGTATCAATAATCCTCCTTGTCTTAATTAGTTAGCTTTCTCTTGATTCATGCTGTTAATTATGTCTGGTTTCTGCAAGTAGATGAAAGATATGTGCTTTGTTGACATATCCATAACAGTACAGCTTACTACTGAGTTTACATAGCGCTAGCCAATTGAGTAGAAAGACTGAAAGAGCAAGAGTACCAATTAAAGCACCTATAAGTAGGATTTGAAGAACCAATTTCAGTTTGCAGTCAAAATAGCATCACATCAGCTTGAGGCACCACTTCCTTTTTTCTAGCCTGGAGTCTTTGCTTGTTTTAGCACCTCGGTTAAGCTAGTACAACTAGAATCAACATGGTGAATGGACGTAAATATGGTGGTAGTGTAACCACAAATTTGTATTGGTCATGTAGTATCCTTCCCCTGAAAACATTTTCAGGGGAAGTCTGAATTTTCTTTGTCGATACTATAACTAACTTAAGAAAAAAATGAAGAAATGACAG GAGGGTGGGAGCCAAATGACAACCAAAATCGAATCTTTTCGGCTCGATCATTTCTCTTCTTTTCCAACTCTTTTCGCCGCCTTGAATTAAAATATACAGGACAGTCAATGATCCGTCGCCACCAGAAGAAAAGAGTTTTGTTAGGTACACACTTTTGTCGACGGCTAATTGTTGCCGGGCGGCACGCAGGTGCAGCGATCGATCTTATCACCACACAAGCGTTTTTCCAATGCTTTGTCCTGACCGACAATTTTTTTTGTACAAATCCATTATTAGCGGCAAAAACTCCGTCCAAGATGGC ]
consensusID : consensus_12040#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1205 fasta sequence
[GGACAATTGGATCATGTGATGACATATCCACACTCGATTGGGAACGGAAATCATATGAGCTGGGACATTTATACAATCTGATGCCCAGTACTTCTCCCTAGTTGTATAATGTCCGTACGTCTCGTTATACGTCACTGTCCAGTCACAAGACGGCTACTACTGTAAAAAATTGACGACAAGATGGCGCAACGGAACTGATGGCCATGTTTAACGAGCTACTCCCTCCGGTTCTATATAATAATTAATGTTTTGGATAAGATTGATGTCAAACTTTTATAACTTTGACTATCAACAACTTTAAAAATATTTAGTTTAAAGAACATACGTAGATTTGTCTTTCAAAACACTATAATAAAAGTAAACATGCATTTATTTATTGTGTATATTATAATAGAAAATATAAGGTCAAATATATATTTTGTAAACCGTGTCATTGTCCAAACCGTCAAATAAAATGAAACCGGAGGGAGTATAGTGTATTTTCAATCATCAATTAAATGCATTGTTGTTTATGTGGCTTATTTGAAAACATAAAAATGACACCTCCCATTAATTGCAAATGGCCTTATAGCCGCGGCAGAATTTGTTTAGAATCTCTAATTTTAAAGTAGTTTTTTTTTGTCATGGTTGCGGTAAAAATTGGATGAATTGACGCGGGCGAATTAAGGACGTGCCGGTGAATTTTGTGCAGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTGCACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
[+] EMBL AK072228 [GGACAATTGGATCATGTGATGACATATCCACACTCGATTGGGAACGGAAATCATATGAGCTGGGACATTTATACAATCTGATGCCCAGTACTTCTCCCTAGTTGTATAATGTCCGTACGTCTCGTTATACGTCACTGTCCAGTCACAAGACGGCTACTACTGTAAAAAATTGACGACAAGATGGCGCAACGGAACTGATGGCCATGTTTAACGAGCTACTCCCTCCGGTTCTATATAATAATTAATGTTTTGGATAAGATTGATGTCAAACTTTTATAACTTTGACTATCAACAACTTTAAAAATATTTAGTTTAAAGAACATACGTAGATTTGTCTTTCAAAACACTATAATAAAAGTAAACATGCATTTATTTATTGTGTATATTATAATAGAAAATATAAGGTCAAATATATATTTTGTAAACCGTGTCATTGTCCAAACCGTCAAATAAAATGAAACCGGAGGGAGTATAGTGTATTTTCAATCATCAATTAAATGCATTGTTGTTTATGTGGCTTATTTGAAAACATAAAAATGACACCTCCCATTAATTGCAAATGGCCTTATAGCCGCGGCAGAATTTGTTTAGAATCTCTAATTTTAAAGTAGTTTTTTTTTGTCATGGTTGCGGTAAAAATTGGATGAATTGACGCGGGCGAATTAAGGACGTGCCGGTGAATTTTGTGCAGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTGCACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
consensusID : consensus_12040#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 647 fasta sequence
[AAGACGGAGGTGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG-CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
[+] EMBL CB637916 [AAGACGGAGGTGGTTTCACAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTGTTTCTACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAACCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCAC ]
[+] EMBL CB640670 [ ACGGAGGTGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCG ]
[+] EMBL CB673832 [ AGGTGGTCTCACAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCATTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCACAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
[+] EMBL CB642296 [ AGGTGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
[+] EMBL CB642298 [ AGGTGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
[+] EMBL CB639924 [ TGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCT ]
[+] EMBL CB684177 [ TCTCCCCGCTCTTCGCAGTGGCGACCCCTATCAGGGACATCACCGATGTGTGCTCGTCACAGATCAAGGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTTGAGCTG CACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 CACTGAACCACCTGCAAGACGGAGGTGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCAT 60
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 CTTCTTCACCTGCTTGCCTTCTCCCTGCTCTTCGCAGTGGCGACCCCTATCAGGGACATC 120
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 ACCGATGTGTGCTCGTCACAGATCAAGGGTATCAATAATCCTCCTTGTCTTAATTAGTTA 180
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 GCTTTCTCTTGATTCATGCTGTTAATTATGTCTGGTTTCTGCAAGTAGATGAAAGATATG 240
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TGCTTTGTTGACATATCCATAACAGTACAGCTTACTACTGAGTTTACATAGCGCTAGCCA 300
consensus_12040#1 ---------------------------------------------GGACAATTGGATCAT 15
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 ATTGAGTAGAAAGACTGAAAGAGCAAGAGTACCAATTAAAGCACCTATAAGTAGGATTTG 360
consensus_12040#1 GTGATGACATATCCACACTCGATTGGGAACGGAAATCATATGAGCTGGGACATTTATACA 75
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 AAGAACCAATTTCAGTTTGCAGTCAAAATAGCATCACATCAGCTTGAGGCACCACTTCCT 420
consensus_12040#1 ATCTGATGCCCAGTACTTCTCCCTAGTTGTATAATGTCCGTACGTCTCGTTATACGTCAC 135
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TTTTTCTAGCCTGGAGTCTTTGCTTGTTTTAGCACCTCGGTTAAACTAGTACAACTAGAA 480
consensus_12040#1 TGTCCA-GTCACAAGACGGCTACTACTGTAAAAAATTGACGACAAGATGGCGCAACGGAA 194
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TCAACATGGTGAATGGACGTAAATATGGTGGTAGTGTAACCACAAATTTGTATTGGTCAT 540
consensus_12040#1 CTGATGGCCATGTTTAACGAGCTACTCCCTCCGGTTCTATATAATAATTAATGTTTTGGA 254
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 GTAGTATCCTTCCCCTGAAAACATTTTCAGGGGAAGTCTGAATTTTCTTTGTCGATACTA 600
consensus_12040#1 TAA--GATTGATGTCAAACTTTTATAACTTTGACTATCAACAACTTTAAAAATATTTAGT 312
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TAACTAACTTAAGAAAAAAATGAAGAAATGACAGCGAGGGTGGGAGCCAAATGACAACCA 660
consensus_12040#1 TTAAAGAACATACGTAGATTTGTCTTTCAAAACACTATAATAAAAGTAAACATGCATTTA 372
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 AAATCGAATCTTTTCGGCTCGATCATTTCTCTTCTTTTCCAACTCTTTTCGCCGCCTTGA 720
consensus_12040#1 TTTATTGTGTATATTATAATAGAAAATATAAGGTCAAATATATATTTTGTAAACCGTGTC 432
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 ATTAAAATATACAGGACAGTCAATGATCCGTCGCCACCAGAAGAAAAGAGTTTTGTTAGG 780
consensus_12040#1 ATTGTCCAAACCGTCAAATAAAATGAAACCGGAGGGAGTATAGTGTATTTTCAATCATCA 492
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TACACACTTTTGTCGACGGCTAATTGTTGCCGGGCGGCACGCAGGTGCAGCGATCGATCT 840
consensus_12040#1 ATTAAATGCATTGTTGTTTATGTGGCTTATTTGAAAACATAAAAATGACACCTCCCATTA 552
consensus_12040#2 ----------------------------------------------------------AA 2
consensus_12040#0 TATCACCACACAAGCGTTTTTCCAATGCTTTGTCCTGACCGACAATTTTTTTTGTACAAA 900
*
consensus_12040#1 ATTGCAAATGGCCTTATAGCCGCGGCA-GAATTTGTTTAGAATCTCTAATTTTAAAGTAG 611
consensus_12040#2 GACGGAGGTGGTTTCAGAGTTTAGAGATAAGATGGCGCTGCATCTTCTTCACCTGCTTGC 62
consensus_12040#0 TCCATTATTAGCGGCAAAAACTCCGTCCAAGATGGCATATTTTCCTAAGAAAAAAAAAAC 960
* * * * * * * **
consensus_12040#1 TTTTTTTTTGTCATGGTTGCGGTAAAAATTGGATGAAT----TGACGCGGGCGAATTAAG 667
consensus_12040#2 CTTCTCCCTGCTCT--TCGCAGTGGCGACCCCTATCAG----GGACATCACCGATGTGTG 116
consensus_12040#0 TCTTCCTATTGAGTCCTCTCGATAGCATCCTGTTCTGACTTTAAGTAGATATAATATGTG 1020
* * * * * * * * *
consensus_12040#1 GACGTGCCG--------GTGAATTTTGTGCAGATTTCCAGTACCTGA--ACAGCAC---G 714
consensus_12040#2 CTCGTCACA--------G---ATCAAG----GATTTCCAGTACCTGA--ACAGCAC---G 156
consensus_12040#0 GACTTCACATTCAGCGAGTTTATATGTCAGTGATGACCAATACCAGAGAACAATACTTTG 1080
* * * * ** *** *** **** ** *** ** *
consensus_12040#1 GGCCTGCACCTTGAGCTGCACCACCCGCGGAGCC--CCTGCTCGCCGGCGCCGGTCCCGG 772
consensus_12040#2 GGCCTGCACCTTGAGCTGCACCACCCGCGGAGCC--CCTGCTCGCCGGCGCCGGTCCCGG 214
consensus_12040#0 GAGAGACTTGTCTCTTTCCAATACGACCAAAGCCAGCCTTCAATCGAAGGCCGTACACGG 1140
* * * * ** ** * **** *** * * **** * ***
consensus_12040#1 CCGACCTCCCGTTCA--CGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGC 830
consensus_12040#2 CCGACCTCCCGTTCA--CGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGC 272
consensus_12040#0 TACACTGTTCACTGAGCCATCGCAATTTATATATGGTCTCAGTCGAAATTGATGGCCGGT 1200
** * * * * ** * * * * ** * * * ** **
consensus_12040#1 GGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGC 890
consensus_12040#2 GGCGCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGC 332
consensus_12040#0 TA-GTGGTTCGATTGACTGCTGTCATGGAAGGCCATGATGTGAAGCTCTAACGGTAGC-C 1258
* * *** ** *** * **** * * *** * *
consensus_12040#1 CGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCT-CAGCCCCGGCGCGTCCGTGGGCGTGG 949
consensus_12040#2 CGGCCTCGCCGGCTCCCTCGCGTCCGTGCCGCT-CAGCCCCGGCGCGTCCGTGGGCGTGG 391
consensus_12040#0 ATACTTCGCCT-CTCCCCCGTGAAACCACCGATGCCAAACCACCATATCTATCAGCCT-- 1315
* ***** ***** ** * *** * * ** * ** * ** *
consensus_12040#1 GCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGT---GATGGTCG 1006
consensus_12040#2 GCAACTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGT---GATGGTCG 448
consensus_12040#0 ---ATCATGCGCCGCGCGCGACCACAAATGCGCCGGACAGGATGGCCGCCGAGATGGGCA 1372
* * * * ***** * * ****** * * * ** ***** *
consensus_12040#1 TGGACACGGGCTCCTCGC-----TCACCTGGCTGCAGTGCTC------GCCGTGCCTCGT 1055
consensus_12040#2 TGGACACGGGCTCCTCGC-----TCACCTGGCTGCAGTGCTC------GCCGTGCCTCGT 497
consensus_12040#0 CCGGATCGATCGGCTAGAAAACGTCACCGATACGTGGGGTTTTTCAATGCCATTGCAAAT 1432
* ** * ** * ***** * * * * *** * * *
consensus_12040#1 GTCGTGCCACC-GGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTA-CGCC 1113
consensus_12040#2 GTCGTGCCACC-GGCAGTCCGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTA-CGCC 555
consensus_12040#0 GGCTTCCTTTTTGGCAACTTTTTCTTTTGCCATGACTTGAATCATCCAGCACCGATCGAT 1492
* * * * **** * ** * * ** ** ****** * **
consensus_12040#1 TCCGTGGGGTGCTCCGCGCAGCAGTGC--AGCG--ACCTCCCCTCCGCCACGCTCAACCC 1169
consensus_12040#2 TCCGTGGGGTGCTCCGCGCAGCAGTGC--AGCG--ACCTCCCCTCCGCCACGCTCAACCC 611
consensus_12040#0 GATATTACG-GCTGCATGTAGGCACGCTCAACAGAAACTCGGTGCTGCTGTAAATAGTTT 1551
* * *** * * ** ** * * * *** * ** *
consensus_12040#1 GTC-GGCTTGCT---CCTCCTCCAACGTCTGCATCTACCA-------------------- 1205
consensus_12040#2 GTC-GGCTTGCT---CCTCCTCCAACGTCTGCATCTACCA-------------------- 647
consensus_12040#0 GCCTAGTTAGCTGGGCCACCTCTGGATTGTACTCTCACCGTATCAAAATAAGTATAACAG 1611
* * * * *** ** **** * * * ***
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 CTTAATATATGATGAGACACTAGGATACGTTACATTGCTATATTTTGATATGGAAGTAGT 1671
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 ACTACTGTTGTACGTGATGGTCCAGTCCAACGCCCCCTGGCTTCTTCAGAAGTGGTTAGT 1731
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TCTCCAGTCATCCAAAGCAGCAGTACAATCCTGGTTGTTCCCACTTGAGAAAAAATATCT 1791
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 TTGGTTGCTCGTCATAATAGAGGGGGGAAGGCAAGGTACCATATGCTTTGTAGGTGTTCT 1851
consensus_12040#1 ------------------------------------------------------------
consensus_12040#2 ------------------------------------------------------------
consensus_12040#0 GTACTTAGGCACCAAGACTGGGTGTTGTGTTAATTTGTGGTCCTCGTTATAGACATCAGA 1911
consensus_12040#1 --------------------------------------------------
consensus_12040#2 --------------------------------------------------
consensus_12040#0 CAATCACTCCATTATCTTGTGTATCATGTTAACTACCAACCAAATGCATC 1961
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||