These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12045#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1440 fasta sequence [ATAAAAAAATAAAGAAAAGAAAAAAAATACTAGTAGTACTCTCTCTCTACTCCACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC-TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC-TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACTTACGGAAGGGAAGGGGAAATCTTTACTAGGATGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK111795 [ATAAAAAAATAAAGAAAAGAAAAAAAATACTAGTAGTACTCTCTCTCTACTCCACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCCTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCGCCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAA ] [+] EMBL C26477 [ AAAAAATACTAGTAGTACTCTCTCTCTACTCCACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTTTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGCTTTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGNG CCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAG ] [+] EMBL CB672640 [ ACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAACGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTACGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATANACCACCA ] [+] EMBL AK104468 [ TCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACT ] [+] EMBL AK119901 [ TCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACTTACGGAAGGGAAGGGGAAATCTTTACTAGGATGAAGAAAAAAAAAAA ] [+] EMBL OSC25731 [ GCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTNTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTTCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGG ] [+] EMBL OSC270 [ ATGGAGTGGTGGGTNTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTTCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGCTTTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACC AAACAAACTTAAG ] [+] EMBL AK111954 [ TAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACT ] [+] EMBL AU091536 [ GTCTCTCATCTCATAAACGACCATAA GTGNA TTGCATGAA GCTGCACTTTTAACCACCGTTATGTGAAGTCCACCCTTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGNCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACNTCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACTTACGGAAaaaa ] [+] EMBL AU091666 [ GCATCAGGGACANCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGNGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACNCGATGGAAATGAACTTNCGGAAGGGAAGGGGAAATCTTTACTAGGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||