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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2139 fasta sequence
[AATTGGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGCTGGATTCTTGGCCTCAGCAGTTACATGCATCTTCTGCTGGATTTATATGGTAATAGATCGTCACTGACTGGGTAGATTATCAAAACCGACTTGTTAGAGGTGACATGCACTCAGAGAAGCCTCTCAAAGGTTGTAACAGGGTTGTTAGTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTCTCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTGTTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAACTCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTATGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGGTTTTTTGGTGTTCAGCATCCTAGCATCCTTCACAACTCTTGTGGTGGTGGCAAGTGGAAACCTGCAGTGGAGTTCTCTTCTTGAAGCAAATTTTGCTGCTGCCCCACAAAGTATACCGATAATTGCTCTTTCATTTGTATACCAGAATGTAGTTCCTGTTCTGTGTACAAATTTGGAGGGAGACCTATCAAAAGTAAGGAAGGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGATGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCTTGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACCAGGTGGACAGAACAAACCTCTGCCGTACCTTCTGACTTTGCTCCCACCGCTTGTTCTGTCATTGCTTGATCCAGAGATATTTTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGGCAAGGATCCTTTTAAACTATCTCTTATTATGAATAGATGTAGAGAAGAAACATGTATAGTCCTATGCTATTTTAAAATTTATTTTACTAGAAGACTTGTCAAGTTGTCATGCAATGAAACCAACCAATCATGACATTTCAGTCACCCTTTTTTTTCCATTTTGATACCTAAGAACTTAGCAGCTCGTTTATTTATTCCAATTTGATATCTAAGAACTTAGCACCTCATTTACGTGTTTTTTCACCTAATCCTAAAAAGGAAATAAAACAGTTTTACAGTTTATTGGTGGTGGGTAAATGAAAAAACGTGAGTGCTTATCTAGGTTCGTAGCCTGACCCAATCTGGGTTGAAAGGGAACTCCTAGATTAGATTTGCCACTTCAGTACATTAAATTGATATCTTATCAGGAGAGAGGAAAAAAAGGAAGAATGAACTGATATCTTGAATGTGCTCTTTTCAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCCTTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAATGCAGTTGCAAGGACTACACTGACACTTAGATCTCCAATATAGATGCTTCAACAGATTTTCTTTTAAATGCAATACCGCTGATAGCCTCGTAATATTGTACATAGAATTGACTGAGCCAGCTTTTCTTAATTTAATTCTT]
[+] EMBL OSS14454A [AATTGGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGTACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGGACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTNACAC AGGAGCTGGGTTCTTNGGCTCAGCAGTTACATG ]
[+] EMBL CB672929 [ TTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGCTGGATTCTTGGCCTCAGCAGTTACATGCATCTTCTGCTGGATTTATATGGTAATAGATCGTCACTGACTGGGTAGATTATCAAAACCGACTTGTTAGAGGTGACATGCACTCAGAGAAGCCTCTCAAAGGTTGTAACAGGGTTGTTAGTTGCTGAAGTAAACGTCAATACTATGTGTGAACTACGATCTGGAGGTGTCTCCCTGGTCTCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTGTTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAACTCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTATGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGG ]
[+] EMBL CB672933 [ TTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGCTGGATTCTTGGCCTCAGCAGTTACATGCATCTTCTGCTGGATTTATATGGTAATAGATCGTCACTGACTGGGTAGATTATCAAAACCGACTTGTTAGAGGTGACATGCACTCAGAGAAGCCTCTCAAAGGTTGTAACAGGGTTGTTAGTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTCTCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTGTTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAACTCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTATG ]
[+] EMBL AK066067 [ ACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGCTGGATTCTTGGCCTCAGCAGTTACATGCATCTTCTGCTGGATTTATATGGTAATAGATCGTCACTGACTGGGTAGATTATCAAAACCGACTTGTTAGAGGTGACATGCACTCAGAGAAGCCTCTCAAAGGTTGTAACAGGGTTGTTAGTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTCTCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTGTTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAACTCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTATGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGGTTTTTTGGTGTTCAGCATCCTAGCATCCTTCACAACTCTTGTGGTGGTGGCAAGTGGAAACCTGCAGTGGAGTTCTCTTCTTGAAGCAAATTTTGCTGCTGCCCCACAAAGTATACCGATAATTGCTCTTTCATTTGTATACCAGAATGTAGTTCCTGTTCTGTGTACAAATTTGGAGGGAGACCTATCAAAAGTAAGGAAGGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGATGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCTTGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACCAGGTGGACAGAACAAACCTCTGCCGTACCTTCTGACTTTGCTCCCACCGCTTGTTCTGTCATTGCTTGATCCAGAGATATTTTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGGCAAGGATCCTTTTAAACTATCTCTTATTATGAATAGATGTAGAGAAGAAACATGTATAGTCCTATGCTATTTTAAAATTTATTTTACTAGAAGACTTGTCAAGTTGTCATGCAATGAAACCAACCAATCATGACATTTCAGTCACCCTTTTTTTTCCATTTTGATACCTAAGAACTTAGCAGCTCGTTTATTTATTCCAATTTGATATCTAAGAACTTAGCACCTCATTTACGTGTTTTTTCACCTAATCCTAAAAAGGAAATAAAACAGTTTTACAGTTTATTGGTGGTGGGTAAATGAAAAAACGTGAGTGCTTATCTAGGTTCGTAGCCTGACCCAATCTGGGTTGAAAGGGAACTCCTAGATTAGATTTGCCACTTCAGTACATTAAATTGATATCTTATCAGGAGAGAGGAAAAAAAGGAAGAATGAACTGATATCTTGAATGTGCTCTTTTCAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCCTTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAATGCAGTTGCAAGGACTACACTGACACTTAGATCTCCAATATAGATGCTTCAACAGATTTTCTTTTAAATGCAATACCGCTGATAGCCTCGTAATATTGTACATAGAATTGACTGAGCCAGCTTTTCTTAATTTAATTCTT]
consensusID : consensus_12065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 830 fasta sequence
[AAACAAACTTTGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGCT-GGATTC-TTGGCCTCAGCAGTTACATGCATCTTCTGCTGGATTTATATGGTTGTAACAGGGTTGTTAGTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTCTCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTGTTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAACTCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTATGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGGTTTTTTGGTGTTCAGCATCCTAGCATCCTTCACAACTCTTGTGGTGGTGGCAAGTGGAAACCTGCAGTGGAGTTCTCTTCTTGAAGCAAATTTT]
[+] EMBL CB625786 [AAACAAACTTTGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGCT GGATTC TTGGCCTCAGCAGTTACATGCATCTTCTGCTGGATTTATATGGTTGTAACAGGGTTGTTAGTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTCTCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTGTTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAACTCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTATGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGGTTTTTTGGTGTTCAGCATCCTAGCATCCTTCACAACTCTTGTGGTGGTGGCAAGTGGAAACCTGCAGTGGAGTTCTCTTCTTGAAGCAAATTTT]
[+] EMBL OSS14452A [ aaTTGGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTCTTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGGCCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGTACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCAGCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACTACGGTAGGGGCGGGTATCCTTGCAATCCCTGCAGTGACACAAGAAGTTGGGATTCTTTGGCCTCAGCAGTTACATGCATCTTCTGCTTGGNTTATATGGTTGTAA ]
consensusID : consensus_12065#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 783 fasta sequence
[AGGGAGACCTATCAAAAGTAAGGAAGGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGATGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCTTGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACCAAGTGGACAGAACAAACCTCTGCCGT-ACCTT-CTGACTT-TGCTCCCACCGCTTGTTC-TGTCATTGCTTGATCCAGAGATATT-TTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCC-TTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAAT-GCAGTT-GCAAGGACTACACT-GACACTT-AGATCTCCAATATAGAT-GC-TTCAAC-AGATTT-TCT-TTTAAATGCAATACCGCTGATAGCCTCGTAAT-ATTGTACATAGAATTGACT-GAGCCAGCTTTT-CTTAATTTAATTCTTTCACAGTTTCATCAAGTTATTCTATTGAGACAGGCTGAAGGATGAAGCTATTTTCTTTTATTATTTTTTGACGTGAGTTTTCTTTTAAAAA]
[-] EMBL CB672930 [AGGGAGACCTATCAAAAGTAAGGAAGGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGATGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCTTGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACCAAGTGGACAGAACAAACCTCTGCCGT ACCTT CTGACTT TGCTCCCACCGCTTGTTC TGTCATTGCTTGATCCAGAGATATT TTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCC TTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAAT GCAGTT GCAAGGACTACACT GACACTT AGATCTCCAATATAGAT GC TTCAAC AGATTT TCT TTTAAATGCAATACCGCTGATAGCCTCGTAAT ATTGTACATAGAAGTGACT GAGCCAGCTTTT CTTAATTTAATTCTTTCACAGTTTCATCAAGTTATTCTATTGAGACAGGTTAAAGGA GAAGCTATTTTCTTTTAT ]
[-] EMBL CB672934 [ GGGAGACCTATCAAAAGTAAGGAAGGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGATGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCTTGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACCAAGTGGACAGAACAAACCTCTGCCGT ACCTT CTGACTT TGCTCCCACCGCTTGTTC TGTCATTGCTTGATCCAGAGATATT TTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCC TTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAAT GCAGTT GCAAGGACTACACT GACACTT AGATCTCCAATATAGAT GC TTCAAC AGATTT TCT TTTAAATGCAATACCGCTGATAGCCTCGTAAT ATTGTACATAGAATTGACT GAGCCAGCTTTT CTTAATTTAATTCTTTCACAGTTTCATCAAGTTATTCTATTGAGACAGGCTGAAGGATGAAGCTATTTTCTTTTATTATTTTTTGACG ]
[-] EMBL CB625787 [ GGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGATGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCTTGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACCAAGTGGACAGAACAAACCTCTGCCGT ACCTT CTGACTT TGCTCCCACCGCTTGTTC TGTCATTGCTTGATCCAGAGATATT TTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCC TTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAAT GCAGTT GCAAGGACTACACT GACACTT AGATCTCCAATATAGAT GC TTCAAC AGATTT TCT TTTAAATGCAATACCGCTGATAGCCTCGTAAT ATTGTACATAGAATTGACT GAGCCAGCTTTT CTTAATTTAATTCTTTCACAGTTTCATCAAGTTATTt ]
[+] EMBL BQ908999 [ GCCGTGACCTTGGTGACTTGTGCTCCCACCGCTTGTTCTTGTCATTGCTTGATCCAGAGATATTGTTTCAAGGCATTGGACTTTGCAGGAACTTATGGAGTTCTAGTACTTTTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCTCCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCCATTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAATGGCAGTTGGCAAGGACTACACTGGACACTTGAGATCTCCAATATAGATGGCGTTCAACAAGATTTGTCTGTTTAAATGCAATACCGCTGATAGCCTCGTAATGATTGTACATAGAATTGACTGGAGCCAGCTTTTGCTTAATTGAATTCTTTCACAGTTTCATCAAGTTATTCTATTGAGACAGGCTGTAGTATGAAGCTATTTTCTTTTATTATTTTTTGACGTGAGTTTTCTTTTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12065#0 ------AATTGGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTC 54
consensus_12065#1 AAACAAACTTTGTTTGCAGTTGCAGACGAAGAACACCGGCAATGGCGTTAACTGCTTCTC 60
consensus_12065#2 AGGGAGACCT--------ATCAAAAGTAAGGAA----GGCAATTGTAGTAGGTACCGCCA 48
* * * * * *** ****** * ** * * *
consensus_12065#0 TTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGG 114
consensus_12065#1 TTCGCTGCTACCCTCTACTGGGCTCAGCAGCAGCAGCATCATCGTCAGTCTCACTTCCGG 120
consensus_12065#2 TAC-CCCTTGCTCTGTTT----CTCATATGGGATGCTGTAATCCTGGGGA-CACTTCCAG 102
* * * * * ** * **** * * *** * * ******* *
consensus_12065#0 CCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGC--TGCA 172
consensus_12065#1 CCTCCACAAGAGCGCCGGTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGC--TGCA 178
consensus_12065#2 GCCTTGCAGGGG-ATGGAACCATTATTGATCCACTAGAACAGCTTCGATCAAGTAATGGA 161
* ** * * * * * * * * ** ** * * ** * * ** *
consensus_12065#0 ACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCA 232
consensus_12065#1 ACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCGCAGCAGCAGCA 238
consensus_12065#2 ACAGTG---GGGCCTAT-------TGTTGAGGCATTCTCATTT--CTTGCAATTGGCACA 209
** ** * ** * *** **** ** *** * **
consensus_12065#0 GCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCA-ACCAGGCAACCATGAAGCACG 291
consensus_12065#1 GCAGAATCAGCAGCTGGAGCGACTCTTCTCCAATCTCA-ACCAGGCAACCATGAAGCACG 297
consensus_12065#2 TCATACATTG-GATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTTGCTTAAACTACC 268
** * * * * * * **** * *** * *** * * * ** **
consensus_12065#0 AACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCC--GGCACTACGGTAGGGGCGGG 349
consensus_12065#1 AACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCC--GGCACTACGGTAGGGGCGGG 355
consensus_12065#2 AAGTGGACAGAACAAACC-TCTGCCGTACCTTCTGACTTTGCTCCCACCGCTTGTTCTGT 327
** * ** * * * * * **** ** * * * ** * * * *
consensus_12065#0 TATCCTTGCAATCCCTGCAGTGACACAAGAAGCTGGATTCTTGGCCTCAGCAGTTACATG 409
consensus_12065#1 TATCCTTGCAATCCCTGCAGTGACACAAGAAGCTGGATTCTTGGCCTCAGCAGTTACATG 415
consensus_12065#2 CATTGCTTGATCCAGAGATATTTTTCAAGGCATTGGACTTTG-----CAGGAACT-TATG 381
** * * * * * **** **** * * *** * * ***
consensus_12065#0 CATCTTCTGCTGGATTTATATGGTAATAGATCGTCACTGACTGGGTAGATTATCAAAACC 469
consensus_12065#1 CATCTTCTGCTGGATTTATATGGT------------------------------------ 439
consensus_12065#2 GAG-TTCTAGTACTTTTTGGAGTTT----------------------------------- 405
* **** * *** * *
consensus_12065#0 GACTTGTTAGAGGTGACATGCACTCAGAGAAGCCTCTCAAAGGTTGTAACAGGGTTGTTA 529
consensus_12065#1 --------------------------------------------TGTAACAGGGTTGTTA 455
consensus_12065#2 -------------------------------------------TTCCAGCAGCTATGTC- 421
* * *** ***
consensus_12065#0 GTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTC 589
consensus_12065#1 GTTGCTGAAGTAAACGTCAATACTATGTGTGAACTAGGATCTGGAGGTGTCTCCCTGGTC 515
consensus_12065#2 -TTGGTCAGAGAGGTACTCAGA-------TGATCTGGAAGCTCCAGTACCACCAATAGTC 473
*** * * * * * *** ** * * ** ** * * ***
consensus_12065#0 TCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTG 649
consensus_12065#1 TCAATGGCTATGCGCACTCTAGGGACATTTGGAGTAAGAACAGCTTGCATCTCATATTTG 575
consensus_12065#2 CCGGGAGGAAAATTTACCCTC---TCATTTGTCATGGGGGGTGCCTTGCTCGTA-ATTTT 529
* * * ** ** ****** * * ** * ** * ****
consensus_12065#0 TTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAAC 709
consensus_12065#1 TTTATACATTATGCACTTCTGGTTGCATATGTGGCACGCTCTTCAGAGATCATAACAAAC 635
consensus_12065#2 TTCAGAGATTTTCAAGGACATAATGCA---GTTGCAAGGACTACACTGACACTTAGATCT 586
** * * *** * * * **** ** *** * ** ** ** * * *
consensus_12065#0 TCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTA 769
consensus_12065#1 TCAGTGGGCATTCCATTATGGGAGAGTGCTGCCCTGTTTTCACTGGCTTTTGGGGGGCTA 695
consensus_12065#2 CCAATATAGATGCTTCAACAGA----TTTTCTTTTAAATGCAATACCGCT--GATAGCCT 640
** * ** * * * * * * * ** * * * * **
consensus_12065#0 TGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGGTTTTTTGGTGTTCAGCATC 829
consensus_12065#1 TGCTACTTTGGAAGCCAGCGAGTCATTGGTGCGGTTAATGGTTTTTTGGTGTTCAGCATC 755
consensus_12065#2 CGTAATATTGTA---CATAGAATTGACTGAGC------CAGCTTTTCTTAATTTAATTCT 691
* * *** * ** ** * * ** * **** ** *
consensus_12065#0 CTAGCATCCTTCACAACTCTTGTGGTGGTGGCAAGTGGAAACCTGCAGTGGAGTTCTCTT 889
consensus_12065#1 CTAGCATCCTTCACAACTCTTGTGGTGGTGGCAAGTGGAAACCTGCAGTGGAGTTCTCTT 815
consensus_12065#2 TTCACAGTTTCATCAAGTTATTCTATTGAGACAGGCTGAAGGATGAAGCTATTTTCTTTT 751
* ** * *** * * * * * ** * *** ** ** **** **
consensus_12065#0 -------CTTGAAGCAAATTTTGCTGCTGCCCCACAAAGTATACCGATAATTGCTCTTTC 942
consensus_12065#1 -------CTTGAAGCAAATTTT-------------------------------------- 830
consensus_12065#2 ATTATTTTTTGACGTGAGTTTTCTTTTAAAAA---------------------------- 783
**** * * ****
consensus_12065#0 ATTTGTATACCAGAATGTAGTTCCTGTTCTGTGTACAAATTTGGAGGGAGACCTATCAAA 1002
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 AGTAAGGAAGGCAATTGTAGTAGGTACCGCCATACCCCTTGCTCTGTTTCTCATATGGGA 1062
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 TGCTGTAATCCTGGGGACACTTCCAGGCCTTGCAGGGGATGGAACCATTATTGATCCACT 1122
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 AGAACAGCTTCGATCAAGTAATGGAACAGTGGGGCCTATTGTTGAGGCATTCTCATTTCT 1182
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 TGCAATTGGCACATCATACATTGGATTTGTTCTAGGACTCTCAGACTTCATAGCAGACTT 1242
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 GCTTAAACTACCAGGTGGACAGAACAAACCTCTGCCGTACCTTCTGACTTTGCTCCCACC 1302
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 GCTTGTTCTGTCATTGCTTGATCCAGAGATATTTTTCAAGGCATTGGACTTTGCAGGAAC 1362
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 TTATGGAGGCAAGGATCCTTTTAAACTATCTCTTATTATGAATAGATGTAGAGAAGAAAC 1422
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 ATGTATAGTCCTATGCTATTTTAAAATTTATTTTACTAGAAGACTTGTCAAGTTGTCATG 1482
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 CAATGAAACCAACCAATCATGACATTTCAGTCACCCTTTTTTTTCCATTTTGATACCTAA 1542
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 GAACTTAGCAGCTCGTTTATTTATTCCAATTTGATATCTAAGAACTTAGCACCTCATTTA 1602
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 CGTGTTTTTTCACCTAATCCTAAAAAGGAAATAAAACAGTTTTACAGTTTATTGGTGGTG 1662
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 GGTAAATGAAAAAACGTGAGTGCTTATCTAGGTTCGTAGCCTGACCCAATCTGGGTTGAA 1722
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 AGGGAACTCCTAGATTAGATTTGCCACTTCAGTACATTAAATTGATATCTTATCAGGAGA 1782
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 GAGGAAAAAAAGGAAGAATGAACTGATATCTTGAATGTGCTCTTTTCAGTTCTAGTACTT 1842
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 TTTGGAGTTTTTCCAGCAGCTATGTCTTGGTCAGAGAGGTACTCAGATGATCTGGAAGCT 1902
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 CCAGTACCACCAATAGTCCCGGGAGGAAAATTTACCCTCTCATTTGTCATGGGGGGTGCC 1962
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 TTGCTCGTAATTTTTTCAGAGATTTTCAAGGACATAATGCAGTTGCAAGGACTACACTGA 2022
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 CACTTAGATCTCCAATATAGATGCTTCAACAGATTTTCTTTTAAATGCAATACCGCTGAT 2082
consensus_12065#1 ------------------------------------------------------------
consensus_12065#2 ------------------------------------------------------------
consensus_12065#0 AGCCTCGTAATATTGTACATAGAATTGACTGAGCCAGCTTTTCTTAATTTAATTCTT 2139
consensus_12065#1 ---------------------------------------------------------
consensus_12065#2 ---------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||