cluster # 12067

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Oryza sativa
cluster # 12067 cluster # 12067 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12067#0 length = 1086 sequences # 10
consensusID : consensus_12067#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1086
fasta sequence
                              [CCTTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT-AGCATCTCTGCATATTGAATATCCT-AT-GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCTTGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT-GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAGG]

[+] EMBL CB659750             [CCTTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGGTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCGACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGGATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGCGACAAAATTATTATGCCACCTTCTGCTCTGGATCGGCT AGCATCTCTGCATATTGAATATCCT AT GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCATACCCAAAAGCAATCTTGGAGAAAACATTGCGGgaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK121784             [  TTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACACTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT AGCATCTCTGCATATTGAATATCCT AT GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCTTGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGCTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAG ]
[+] EMBL AU032268             [            TCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCNCGCNGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGNAGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCNACCTTCTGCTCTGGATCGTCTAAGCATCTCTGCATATTGAATATCCTAATGGCAATTTGAAGTCCACAACGCGGCAncg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C74448               [                AGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCNTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCNCGCCGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGTNGCTACCCTGCGTCTTTCATTGACAAGCCTNAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT AGCATCTCTGCATAATGGATATCCA AT GCAATTTGAAGT CANAA GCGGCA CCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C26839               [                         CTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAAAGGGGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT AGCATNTCTGCATATTGNATATCCT AT GCTATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF322545             [                                                                                                                                                                                                                                                                                                                                                                  CATATTGAATATCCT AT GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCTTGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGATGGGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAAC                                                                                                                    ]
[+] EMBL CB646794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAG ]
[+] EMBL CB096911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCCGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCCTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGGAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAG ]
[-] EMBL CB646795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAGG]
[-] EMBL CB659751             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGAGACCGCCTGGGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAGG]




>consensus_12067#0
CCTTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAG
CCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGC
CGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAA
AGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTA
CCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAA
CTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCTAGCATCTCTGCATATTG
AATATCCTATGCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTG
TCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATC
TTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACAT
ATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCT
TGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCAT
ATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTA
TTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGC
GACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAG
AACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGATGGGAAGGCTCCTAAAG
ATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGC
AGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTG
TTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAAC
CGAAGG
clustalw multiple alignements is not computed in this case