cluster # 1207

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Oryza sativa
cluster # 1207 cluster # 1207 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1207#0 length = 698 sequences # 2

consensusID : consensus_1207#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 698
fasta sequence

                              [CCAACGCGGCGGCGGCGGCGGCGGCGAAGAGGAAGGCGAGGAGCTCGTCGTCGCCGGCACGCGCGCAGCGCAGCGCAG-GGTCGCCGACTTGCGTGTTGCGGTCGCCTCGCCTCGCCGCCCCGCGCTGTTGATCGGTCGGCGAGGACAGGAGGCGCCGAGGCGGGGGTGATGCGGCGGTCGTCGAGCGGGGCGCGCGTGTCGTCGGAGGGCGGCAGCGGCGGCGGCGGAGAGATCGAAGGAGTGGGGCTGCCGACGTGCGACCCGCAGTCGGCGGCGGGGCGGAGGGAGGCGGCGCGGGCGCGGGCGCTGCAGCGCGCCGTGCACTGCATCCCGCTCGTGCTGATCCTCTGCGCCCTCCTCCTCTGGCTCTCCGCCTCTTGAGCCTCTTCGATTGATAACCAATGGGTGTTTCAAGTGGATCTGACGCCACAATGTAGAGTTTATAGAGAAAACAAAATACAAGTGAACTAGATCAGGCATGATCAAGTAAAACACAGAGACATTAAGTTACAAAAAGATTACCACAGCAAGAAGCTCATCTACTACAGTTATATTTTTTTGGTTTCCCCTGAAAAGGGTAGCTGTTTTCGGTATAGATATTCTTTGAACTTTAGATTGGAGATGAGATGATTTGGCGACCATTACAGTTTGTATACAAAGGAAGTGTGTACTCTTTTCCTACACTAAGCATGTATAAT]

[+] EMBL AK108284             [CCAACGCGGCGGCGGCGGCGGCGGCGAAGAGGAAGGCGAGGAGCTCGTCGTCGCCGGCACGCGCGCAGCGCAGCGCAG GGTCGCCGACTTGCGTGTTGCGGTCGCCTCGCCTCGCCGCCCCGCGCTGTTGATCGGTCGGCGAGGACAGGAGGCGCCGAGGCGGGGGTGATGCGGCGGTCGTCGAGCGGGGCGCGCGTGTCGTCGGAGGGCGGCAGCGGCGGCGGCGGAGAGATCGAAGGAGTGGGGCTGCCGACGTGCGACCCGCAGTCGGCGGCGGGGCGGAGGGAGGCGGCGCGGGCGCGGGCGCTGCAGCGCGCCGTGCACTGCATCCCGCTCGTGCTGATCCTCTGCGCCCTCCTCCTCTGGCTCTCCGCCTCTTGAGCCTCTTCGATTGATAACCAATGGGTGTTTCAAGTGGATCTGACGCCACAATGTAGAGTTTATAGAGAAAACAAAATACAAGTGAACTAGATCAGGCATGATCAAGTAAAACACAGAGACATTAAGTTACAAAAAGATTACCACAGCAAGAAGCTCATCTACTACAGTTATATTTTTTTGGTTTCCCCTGAAAAGGGTAGCTGTTTTCGGTATAGATATTCTTTGAACTTTAGATTGGAGATGAGATGATTTGGCGACCATTACAGTTTGTATACAAAGGAAGTGTGTACTCTTTTCCTACACTAAGCATGTATAAT]
[+] EMBL OSS15549A            [                                              GTCGTCGCCGGCACGCGCGCANAG  TCGCAGNGGTCGCCGACTTGCGTGTTGCGGTCGCCTCGCCTCGCCGCCCCGCGCTGTTGATCGGTCGGCGAGGACAGGAGGCGCCGAGGCGGGGGTNATGCGGCGGTCGTCGAGCGGGGCGCGCGTTTCGTCGGAGGGCGGCA CGGCGGCGGCGGAGAGATCGAAGGAGTNGGGCTGCCGACGTGCGACCCGCAGTCGGCGGCGGGGCGNAGGGAGGCGNCGCGNGCNCGGGCGCTGCAGC CGCCGTGCACTGCATCCCGCTCGTNCTGATCCTCTGCGCCCTNCTCCTCTGGCTCTCCGNCTCTTTAAGCTCTTCGATTGATAACCAATGGGTGTTTCAANTGGATCTTACGGCANAATGTA                                                                                                                                                                                                                                                                      ]




>consensus_1207#0
CCAACGCGGCGGCGGCGGCGGCGGCGAAGAGGAAGGCGAGGAGCTCGTCGTCGCCGGCAC
GCGCGCAGCGCAGCGCAGGGTCGCCGACTTGCGTGTTGCGGTCGCCTCGCCTCGCCGCCC
CGCGCTGTTGATCGGTCGGCGAGGACAGGAGGCGCCGAGGCGGGGGTGATGCGGCGGTCG
TCGAGCGGGGCGCGCGTGTCGTCGGAGGGCGGCAGCGGCGGCGGCGGAGAGATCGAAGGA
GTGGGGCTGCCGACGTGCGACCCGCAGTCGGCGGCGGGGCGGAGGGAGGCGGCGCGGGCG
CGGGCGCTGCAGCGCGCCGTGCACTGCATCCCGCTCGTGCTGATCCTCTGCGCCCTCCTC
CTCTGGCTCTCCGCCTCTTGAGCCTCTTCGATTGATAACCAATGGGTGTTTCAAGTGGAT
CTGACGCCACAATGTAGAGTTTATAGAGAAAACAAAATACAAGTGAACTAGATCAGGCAT
GATCAAGTAAAACACAGAGACATTAAGTTACAAAAAGATTACCACAGCAAGAAGCTCATC
TACTACAGTTATATTTTTTTGGTTTCCCCTGAAAAGGGTAGCTGTTTTCGGTATAGATAT
TCTTTGAACTTTAGATTGGAGATGAGATGATTTGGCGACCATTACAGTTTGTATACAAAG
GAAGTGTGTACTCTTTTCCTACACTAAGCATGTATAAT

clustalw multiple alignements is not computed in this case