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Oryza sativa
cluster # 12078 cluster # 12078       Sequences # 10       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12078#0 length = 2683 sequences # 4  
 consensus_12078#1 length = 1330 sequences # 3  
consensus_12078#2 length = 1274 sequences # 3  
consensusID : consensus_12078#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2683
fasta sequence 
                              [CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAGGGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGCCTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAACTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCACTCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCCCTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCATGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAATTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTTTTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTTAAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACCAAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAACATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTCCCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTTTGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTTTACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGCATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGTAAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACATGCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATCTACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACACGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGGATGCATTTAGGTTCTTTATAATATTTTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAGTAATAGTTCTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATATATATTGGTTTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCC-ATGCTGAGGGATCAGCAGGCACTTCTTCCACCA-CAAAATATCT---GCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA]

[+] EMBL AK072683             [CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAGGGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGCCTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAACTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCACTCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCCCTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCATGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAATTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTTTTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTTAAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACCAAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAACATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTCCCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTTTGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTTTACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGCATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGTAAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACATGCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATCTACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACACGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGGATGCATTTAGGTTCTTTATAATATTTTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAGTAATAGTTCTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATATATATTGGTTTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCC ATGCTGAGGGATCAGCAGGCACTTCTTCCACCA CAAAATATCT   GCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATGATATATATGATTCTCCTAAAATGAAATTTATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATT                                                                                                                                           ]
[+] EMBL AU101197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTCCTCNTCCAATGCTGAGGGATCAGCAGGCACTTCTTCCACCACCAAAATATCTGTAGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGNTGGCGGCNCAGGGCCAGGTGCAA TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCNTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA]
[+] EMBL AU108285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAA    ]
[+] EMBL AU108288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAANCCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAA      ]




>consensus_12078#0
CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCT
CTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAG
GTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGC
GGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCA
AGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGG
TCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGA
TGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAG
CTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAG
GGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGC
CTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAA
CTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCAC
TCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCC
CTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCA
TGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAA
TTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTT
TTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTT
AAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACC
AAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAAC
ATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTC
CCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTT
TGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTT
TACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGC
ATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGT
AAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACAT
GCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATC
TACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACA
CGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGGATGCATTTAGGTTCTTTA
TAATATTTTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAGTAATAGTT
CTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATATATATTGGT
TTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATACAGGAAACT
TAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGA
ATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCA
CATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGA
GAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAA
TGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCA
AGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGC
ACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGC
GGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCC
GCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAA
CAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTA
TCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAA
CCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTA
CATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCAT
CAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATAT
ATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA

consensusID : consensus_12078#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1330
fasta sequence 
                              [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCTGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAGCTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAAGATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGATCAGCAGGCACTTCTTTCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAAC-TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACC-TCAATGCTTAAGATGATCATCGTCGTCGTCGTC-GGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATG-AATTGAAGTCATTGGTATCGATCCTAGC-GATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATACGCTAATTAACTGCAGATGCAAACTAATCA]

[+] EMBL AF345911             [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCTGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAGCTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAAGATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGATCAGCAGGCACTTCTTTCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGAAATGATGCGGCGGC GCGGCGGCGGTGGCGGCCCAAGGCCAGGTGCAACTTCCGCATTGGAGGCTTTCCGCCATGGATGCTGAG CACCTTCAAGGCTTAAGATGATCATCGGCGTCGTCGTCGGGCCAACAAGTTGCCGATTGCACCGGGAATCATGGGAGCAACCTTGAATGAAATGGAAG CATTGGGAT   TGGAAGCGGATAATATATATGAATCTCCTAAAAGGAAATGGA CTCAAAAAAAAAAACCTAGCGATTAAGCTATTCTTATATATGCGTTTGCCTGCTGCTCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATACGCTAATTAACTGCAGATGCAAACTAATCA]
[+] EMBL AB003325             [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCCGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAAC TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACC TCAATGCTTAAGATGATCATCGTCGTCGTCGTC GGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATG AATTGAAGTCATTGGTATCGATCCTAGC GATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTG                                                            ]
[+] EMBL AU070008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAAC TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACC TCAATGCTTAAGATGATCATCGTCGTCGTCGTC GGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATG AATTGAAGTCATTGGTATCGATCCTAGC GATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTA                                                                                                                                                                                                                      ]




>consensus_12078#1
CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTA
AGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGG
GCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGCAGGTGACGTTCTC
CAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGA
GGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAG
GATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTC
AGCTGAATCTGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAGCTTAAGGCAAAGAT
TGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCT
CAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAAGATCAAG
AAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCA
GGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCA
GCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCA
AGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGATCAGCAGGCACTTCTTTCACC
ACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGAAATGATGCGGCGGCGGCGGC
GGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCT
GAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTAT
GCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCG
ATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAA
GCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGC
AAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCT
AGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCA
TGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATACGCTAATTAACTGCAGATGC
AAACTAATCA

consensusID : consensus_12078#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1274
fasta sequence 
                              [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTTGAACGTT-ATGAAGCGCTATTCATATGCTGAAAAGGCTCTTA-TTTCAGCTGAATCCGAAAGTGAGGG--AATTTGGTGCCATGAATACAGGGAACTTTANGGAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCATGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCAAAAAAAAAAAAA]

[+] EMBL C74564               [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTTGAACGTT ATGAAGCGCTATTCATATGCTGAAAAGGCTCTTATTTTCAGCTGAATCNGAAAGTTAGGGGNAATTTGGTGNCATGAATACAGGGAACTTTANGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AF058698             [      TTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCC TTGAACGTT ATG AGCGCTATTCATATGCTGAAAAGGCTCTTA TTTCAGCTGAATCCGAGAGTGAGGG  AAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCATGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCAAAAAAAAAAAAA]
[+] EMBL C72923               [                          TCGTCTTCCTCCTTCAGCNAGCTTGTAGCAGCNAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCAATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCANTGACTCCAGGATGGACAAAATCCTTTGAACGTTAATGAAGCGCNATTCATATGCTGAAAAGGCTCTAA TTTAAGCTGAATCCGAAANTAAGGG  AATTTGGTGCCATGAATANAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_12078#2
CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTA
AGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGG
GCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTC
CAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGA
GGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAG
GATGGACAAAATCCTTTGAACGTTATGAAGCGCTATTCATATGCTGAAAAGGCTCTTATT
TCAGCTGAATCCGAAAGTGAGGGAATTTGGTGCCATGAATACAGGGAACTTTANGGAAAG
ATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCATGAATCCCTGAAT
CTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCA
AGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTG
CAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGC
CAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCC
CAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCA
CCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCG
GCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATG
CTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGT
ATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAG
CGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATT
AAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTT
GCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTAC
CTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGC
CAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCT 60
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAG 120
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      GTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGC 180
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      GGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCA 240
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      AGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGG 300
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGA 360
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAG 420
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAG 480
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      GGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGC 540
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAA 600
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCAC 660
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCC 720
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCA 780
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAA 840
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTT 900
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTT 960
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      AAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACC 1020
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      AAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAAC 1080
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      ATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTC 1140
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      CCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTT 1200
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTT 1260
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      TACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGC 1320
                                                                                   

consensus_12078#1      ------------------------------------------------------------
consensus_12078#2      ------------------------------------------------------------
consensus_12078#0      ATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGT 1380
                                                                                   

consensus_12078#1      -------CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAG---CTAGCTT 50
consensus_12078#2      -------CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAG---CTAGCTT 50
consensus_12078#0      AAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACAT 1440
                               *  *  *** * *  * *    ***** * * * *     *      * * *

consensus_12078#1      GTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATC--GGCCGCCGGCGAGCGGCGAGC 108
consensus_12078#2      GTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATC--GGCCGCCGGCGAGCGGCGAGC 108
consensus_12078#0      GCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATC 1500
                       *   *   * *   *  ** * **    *     ***  * * **    ***     * *

consensus_12078#1      GGCGAGGATGG-GGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGC 167
consensus_12078#2      GGCGAGGATGG-GGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGC 167
consensus_12078#0      TACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACA 1560
                         * *  *           * ** *  * **        *  *  *     * *      

consensus_12078#1      AGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCC 227
consensus_12078#2      AGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCC 227
consensus_12078#0      CGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGG---ATGC-ATTTAGGTTC 1616
                        ***  * **     *        **      ** **  ***   * *  ** *  ** *

consensus_12078#1      TCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACG 287
consensus_12078#2      TCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACG 287
consensus_12078#0      TTTATAATATT----TTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAG 1672
                       * *   *        *     ******* *  **  *            *    * *  *

consensus_12078#1      CCACTGA-CTCCAGGATGGACAAAATCCTT-GAACGTTATGA-GCGCTATTCATATGC-T 343
consensus_12078#2      CCACTGA-CTCCAGGATGGACAAAATCCTTTGAACGTTATGAAGCGCTATTCATATGC-T 345
consensus_12078#0      TAATAGTTCTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATAT 1732
                         *  *  *** *   * ****  *    * *      *  *  *   *  **      *

consensus_12078#1      GAAAAGGCTCTTATTTCAGCTGAATCTGAGAGTG---AGGGAAATTGGTGCCATGAATAC 400
consensus_12078#2      GAAAAGGCTCTTATTTCAGCTGAATCCGAAAGTG---AGGGAATTTGGTGCCATGAATAC 402
consensus_12078#0      ATATTGGTTTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATAC 1792
                         *  ** *  ** *      ** *       **   ****** ****************

consensus_12078#1      AGGAAGCTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAG 460
consensus_12078#2      AGGGAACTTTANGGAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAG 462
consensus_12078#0      AGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAG 1852
                       *** * *** * * **********************************************

consensus_12078#1      GATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCA 520
consensus_12078#2      GATCATGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCA 522
consensus_12078#0      GATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCA 1912
                       ****  ******************************************************

consensus_12078#1      TTGAAGCACATAAGATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAG 580
consensus_12078#2      TTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAG 582
consensus_12078#0      TTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAG 1972
                       ************* **********************************************

consensus_12078#1      AAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGG 640
consensus_12078#2      AAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGG 642
consensus_12078#0      AAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGG 2032
                       ************************************************************

consensus_12078#1      CAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCC 700
consensus_12078#2      CAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCC 702
consensus_12078#0      CAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCC 2092
                       ************************************************************

consensus_12078#1      CAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGAT 760
consensus_12078#2      CAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGAT 762
consensus_12078#0      CAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGAT 2152
                       ********************************** ** ** ** ** *************

consensus_12078#1      CAGCAGGCACTTCTTTCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGA 820
consensus_12078#2      CAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGA 822
consensus_12078#0      CAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGA 2212
                       *************** ************************************** *****

consensus_12078#1      AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGA 880
consensus_12078#2      AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGA 882
consensus_12078#0      AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGA 2272
                       ************************************************************

consensus_12078#1      GGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGT 940
consensus_12078#2      GGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGT 942
consensus_12078#0      GGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGT 2332
                       ************************************************************

consensus_12078#1      CGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGT 1000
consensus_12078#2      CGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGT 1002
consensus_12078#0      CGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGT 2392
                       ************************************************************

consensus_12078#1      CATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAA 1060
consensus_12078#2      CATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAA 1062
consensus_12078#0      CATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAA 2452
                       ************************************************************

consensus_12078#1      AAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCT 1120
consensus_12078#2      AAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCT 1122
consensus_12078#0      AAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCT 2512
                       ************************************************************

consensus_12078#1      ACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGT 1180
consensus_12078#2      ACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGT 1182
consensus_12078#0      ACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGT 2572
                       ************************************************************

consensus_12078#1      GTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCAT 1240
consensus_12078#2      GTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCAT 1242
consensus_12078#0      GTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCAT 2632
                       ************************************************************

consensus_12078#1      ATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATA 1300
consensus_12078#2      ATAAATATATTTGCATGCCAAAAAAAAAAAAA---------------------------- 1274
consensus_12078#0      ATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA--------- 2683
                       ********************          *                             

consensus_12078#1      CGCTAATTAACTGCAGATGCAAACTAATCA 1330
consensus_12078#2      ------------------------------
consensus_12078#0      ------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)