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Oryza sativa
cluster # 12083 cluster # 12083       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12083#0 length = 1293 sequences # 8  
consensus_12083#1 length = 599 sequences # 1  
consensus_12083#2 length = 557 sequences # 1  

consensusID : consensus_12083#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1293
fasta sequence
                              [GCCATGGCCGACGAGCTCGACGAACTCCTCGGCTTCCTCTCCTCTCCCCAGCCAAACGTGCGCGGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGACGCGGACGGCCTGCGCGCCCTCTCGGCGCGCGCCGACCGCGCGCTGCCGGCGCTGCTCCGGCTGCTGGCGTCCGCGGGGGGCGAGCTGGGCACGGGGGGAGCGGCGGCGGACTCGCTCGTCAACCTCAGCCAGGACGGCGCGCTCTCGGCCCGCCTCGTGTCGCTCGGCGCCGTCGTGGCCGCCATGGACGTCGTGGCCAAGCGCGGCGGGGAGCAGCCGGGCCTCGCGCGCAGCCTCGTCATGCTGCTCGCCAACCTCACCCAGGTCGACTCCGGCGTCGCGGCCCTCCTCCAGGTTGGAGATGAAAAGATGCAAGGACTGTATGTTGCAAAGCTTGTGCGGTCATTCTGCAGGTCATCCAGTGAGTCTGAAGAGGAAGATATCTTTGAACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGGAGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCAACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCTGATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATC-AAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAA-CTCTGAAATTCGGCAACAGGCACTTGAGGCTATTTATAT-GAT-TGTCCTTC-AGG-ATGAAGGACG-AAGGGCTTTTTGGTCAGTC-AATGGTCCGCG-AATA--CTGCAGGTTGGTTATG-AAGACGAGGAGGACCCAAAAGTGAT-GGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCA-AGATCAAGAACA-AGGAGGACAGAAGCCTTAATTTCTGCTGTTTAG-AAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTG-CAAAAACTGGGCTACATTGCAATGCTACC-GTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCATTTGGCAGGTTTTTCCCTGGCTTAAAGCTATCAAGAGTTCTCCATACAATTATGTAAGAACATGGAGAAATATGCATAAACAGAGCAATTTGCCCACTTTTCAATTAAAAGA]

[+] EMBL AK065200             [GCCATGGCCGACGAGCTCGACGAACTCCTCGGCTTCCTCTCCTCTCCCCAGCCAAACGTGCGCGGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGACGCGGACGGCCTGCGCGCCCTCTCGGCGCGCGCCGACCGCGCGCTGCCGGCGCTGCTCCGGCTGCTGGCGTCCGCGGGGGGCGAGCTGGGCACGGGGGGAGCGGCGGCGGACTCGCTCGTCAACCTCAGCCAGGACGGCGCGCTCTCGGCCCGCCTCGTGTCGCTCGGCGCCGTCGTGGCCGCCATGGACGTCGTGGCCAAGCGCGGCGGGGAGCAGCCGGGCCTCGCGCGCAGCCTCGTCATGCTGCTCGCCAACCTCACCCAGGTCGACTCCGGCGTCGCGGCCCTCCTCCAGGTTGGAGATGAAAAGATGCAAGGACTGTATGTTGCAAAGCTTGTGCGGTCATTCTGCAGGTCATCCAGTGAGTCTGAAGAGGAAGATATCTTTGAACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGGAGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCAACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCTGATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAA CTCTGAAATTCGGCAACAGGCACTTGAGGCTATTTATAT GAT TGTCCTTC AGG ATGAAGGACG AAGGGCTTTTTGGTCAGTC AATGGTCCGCG AATA  CTGCAGGTTGGTTATG AAGACGAGGAGGACCCAAAAGTGAT GGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCA AGATCAAGAACA AGGAGGACAGAAGCCTTAATTTCTGCTGTTTAG AAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTG CAAAAACTGGGCTACATTGCAATGCTACC GTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCATTTGGCAGGTTTTTCCCTGGCTTAAAGCTATCAAGAGTTCTCCATACAATTATGTAAGAACATGGAGAAATATGCATAAACAGAGCAATTTGCCCA                ]
[+] EMBL AK065034             [GCCATGGCCGACGAGCTCGACGAACTCCTCGGCTTCCTCTCCTCTCCCCAGCCAAACGTGCGCGGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGACGCGGACGGCCTGCGCGCCCTCTCGGCGCGCGCCGACCGCGCGCTGCCGGCGCTGCTCCGGCTGCTGGCGTCCGCGGGGGGCGAGCTGGGCACGGGGGGAGCGGCGGCGGACTCGCTCGTCAACCTCAGCCAGGACGGCGCGCTCTCGGCCCGCCTCGTGTCGCTCGGCGCCGTCGTGGCCGCCATGGACGTCGTGGCCAAGCGCGGCGGGGAGCAGCCGGGCCTCGCGCGCAGCCTCGTCATGCTGCTCGCCAACCTCACCCAGGTCGACTCCGGCGTCGCGGCCCTCCTCCAGGTTGGAGATGAAAAGATGCAAGGACTGTATGTTGCAAAGCTTGTGCGGTCATTCTGCAGGTCATCCAGTGAGTCTGAAGAGGAAGATATCTTTGAACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGGAGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCAACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCTGATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAA CTCTGAAATTCGGCAACAGGCACTTGAGGCTATTTATAT GAT TGTCCTTC AGG ATGAAGGACG AAGGGCTTTTTGGTCAGTC AATGGTCCGCG AATA  CTGCAGGTTGGTTATG AAGACGAGGAGGACCCAAAAGTGAT GGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCA AGATCAAGAACA AGGAGGACAGAGGCCTTAATTTCTGCTGTTTAG AAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTG CAAAAACTGGGCTACATTGCAATGCTACC GTAATCAATTGT                                                                                                                                             ]
[+] EMBL AU069976             [GCCATGGCCGACGAGCTCGACGAACTCCTCGGCTTCCTCTCCTCTCCCCAGCNAAACGTGCGCTGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGANGCGGACGGCCTGCGCGCNCTCTCGGCG NCGCCGACCGCG NTAGCCGGCGCTGCTCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB656290             [                                           aTCCCCAGCCAAACGTGCGCGGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGACGCGGACGGCCTGCGCGCCCTCTCGGCGCGCGCCGACCGCGCGCTGCCGGCGCTGCTCCGGCTGCTGGCGTCCGCGGGGGGCGAGCTGGGCACGGGGGGAGCGGCGGCGGACTCGCTCGTCAACCTCAGCCAGGACGGCGCGCTCTCGGCCCGCCTCGTGTCGCTCGGCGCCGTCGTGGCCGCCATGGACGTCGTGGCCAAGCGCGGCGGGGAGCAGCCGGGCCTCGCGCGCAGCCTCGTCATGCTGCTCGCCAACCTCACCCAGGTCGACTCCGGCGTCGCGGCCCTCCTCCAGGTTGGAGATGAAAAGATGCAAGGACTGTATGTTGCAAAGCTTGTGCGGTCATTCTGCAGGTCATCCAGTGAGTCTGAAGAGGAAGATATCTTTGAACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGGAGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCAACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCTGATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATC AAAAATGCCTCCTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB659493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGGAGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCAACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCTGATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATC AAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAA CTTTGAAATTCGGCAACAGGCACTTGAGGCTATTTATAT GAT TGTCCTTC AGG ATGAAGGACG AAGGGCTTTTTGGTCAGTC AATGGTCCGCG AATA  CTGCAGGTTGGTTATG AAGACGAGGAGGACCCAAAAGTGAT GGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCA AGATCAAGAACA AGGAGGACAGAAGCCTTAATTTTTGCTGTTTAG AAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTTTTCTATTTATCAGTTGTTG CAAAAACTGGGCTACATTGCAATGCTACC GTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCATTTGGCAGGTTTTT                                                                                                  ]
[-] EMBL CB656291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTGAAGCTGGAAGGAGAATACTGATGGAACNTAAGAGAGGCC TTTAAAACAGATTATACGGCAATCTGATTCAACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCTGATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATC AAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAA CTCTGAAATTCGGCAACAGGCACTTGAGGCTATTTATAT GAT TGTCCTTC AGG ATGAAGGACG AAGGGCTTTTTGGTCAGTC AATGGTCCGCG AATA  CTGCAGGTTGGTTATG AAGACGAGGAGGACCCAAAAGTGAT GGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCA AGATCAAGAACA AGGAGGACAGAAGCCTTAATTTCTGCTGTTTAG AAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTG CAAAAACTGGGCTACATTGCAATGCTACC GTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCATTTGGCAGGTTTTTCCCTGGCTTAAAGCTATCAAGAGTTCTCCATACAATTATGTAAGAACATGGAGAAGTATGCATAAACAGAGCAATTTGCCCACTTTTCAATTAAAAGA]
[+] EMBL AU182815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCTGTTTAAAACCTNTGAAATTGGGCACCAGGCNCTTGGGGCTATTTATAT GAT TGTCCTTC AGGAATAAAGGACGAAAGGGCTTTTTGGTCAGTC AATGGTCCGCGAAATA  CTGCAGGTTGGTTATG AAGACGAGGAGGACCCAAAAGTGAT GGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCA AGATCAAGAACA AGGAGGACAGAAGCCTTAATTTCTGCTGTTTAG AAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTG CAAAAACTGGGCTACATTGCAATGCTACCGGTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCAaaaaaaaa                                                                                                        ]
[+] EMBL BI801326             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cctttggagGGCTATTTATATGGATGTGTCCTTCAAGG ATGAAGGACG AAGGGCTTTTTGGTCAGTCAAATGGTCCGCG AATATTCTTCA GTTGGTTATGAAAGACGAGGAGGACCCCAAAGTGATGGGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCACAGATCAAGAACACAGGAGGACCGAAGCCTTAATTTCTGCTGTTTAGAAAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTGCCAAAAACTGGGCTACATTGC ATGCTACC GTAATC ATTGTTGTATTATGGACCAAAaaaaaaa                                                                                                                      ]


>consensus_12083#0 GCCATGGCCGACGAGCTCGACGAACTCCTCGGCTTCCTCTCCTCTCCCCAGCCAAACGTG CGCGGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGACGCGGACGGCCTGCGCGCC CTCTCGGCGCGCGCCGACCGCGCGCTGCCGGCGCTGCTCCGGCTGCTGGCGTCCGCGGGG GGCGAGCTGGGCACGGGGGGAGCGGCGGCGGACTCGCTCGTCAACCTCAGCCAGGACGGC GCGCTCTCGGCCCGCCTCGTGTCGCTCGGCGCCGTCGTGGCCGCCATGGACGTCGTGGCC AAGCGCGGCGGGGAGCAGCCGGGCCTCGCGCGCAGCCTCGTCATGCTGCTCGCCAACCTC ACCCAGGTCGACTCCGGCGTCGCGGCCCTCCTCCAGGTTGGAGATGAAAAGATGCAAGGA CTGTATGTTGCAAAGCTTGTGCGGTCATTCTGCAGGTCATCCAGTGAGTCTGAAGAGGAA GATATCTTTGAACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGG AGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCA ACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCT GATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTG CCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAATGCCTCCTGAGCTT GCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAACTCTGAAATTCGGCAACAGGCA CTTGAGGCTATTTATATGATTGTCCTTCAGGATGAAGGACGAAGGGCTTTTTGGTCAGTC AATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGAGGACCCAAAAGTGATGGAA GCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCAAGATCAAGAA CAAGGAGGACAGAAGCCTTAATTTCTGCTGTTTAGAAAAAAAAAATTCAGTCCTCCATCG TGTACAATATTCTTCTATTTATCAGTTGTTGCAAAAACTGGGCTACATTGCAATGCTACC GTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCATTTGGCAGGTTTTTCCCTG GCTTAAAGCTATCAAGAGTTCTCCATACAATTATGTAAGAACATGGAGAAATATGCATAA ACAGAGCAATTTGCCCACTTTTCAATTAAAAGA



consensusID : consensus_12083#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [AGAGGCCGAGCCAAGGGGTTGTTAGCACCCTCCGTAACTGTTTTTTTGAAGCAGATACCCAAATCCAAAATTTGCTCTCTTTAGCAGAATATATTTGGCCACCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTCCAGTGAAGAATATAGATCAAAAATGCCTCCTGAGCTTGCAAATGCACTTTCCCATGAACGAGAGGCTGTTGAGATCTTTGAATTTCGGCAACAGGCACGTGGGGCTATTTATATGATTGTCCTTCAGGATAAAGGACGAAGGGCCTTTTGGTCAGTCAATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGGGGCCCCAAAAGTTATGGAAGCATACGAGTTAATTGGTTCTTTGCTTGTTGGCAAGGGGGGTGATGACCAAGTTCAAGAACAAGGAGGACAGAAGCCTTAATTTTTGCTGTTTAGAAAAAAAAATTCAGTCCTCCATCGTGTCCAATTTTTTTCTATTTTTCAGTTGTTGCAAAAACTGGGATACAGTGCAATGTTTCCTTACTCAATTGTTGTATTATGGACAAAATTTTTTTGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA759018             [AGAGGCCGAGCCAAGGGGTTGTTAGCACCCTCCGTAACTGTTTTTTTGAAGCAGATACCCAAATCCAAAATTTGCTCTCTTTAGCAGAATATATTTGGCCACCTCTACTTTTGCCCGTAGCTGGAAAGAAGATCTCCAGTGAAGAATATAGATCAAAAATGCCTCCTGAGCTTGCAAATGCACTTTCCCATGAACGAGAGGCTGTTGAGATCTTTGAATTTCGGCAACAGGCACGTGGGGCTATTTATATGATTGTCCTTCAGGATAAAGGACGAAGGGCCTTTTGGTCAGTCAATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGGGGCCCCAAAAGTTATGGAAGCATACGAGTTAATTGGTTCTTTGCTTGTTGGCAAGGGGGGTGATGACCAAGTTCAAGAACAAGGAGGACAGAAGCCTTAATTTTTGCTGTTTAGAAAAAAAAATTCAGTCCTCCATCGTGTCCAATTTTTTTCTATTTTTCAGTTGTTGCAAAAACTGGGATACAGTGCAATGTTTCCTTACTCAATTGTTGTATTATGGACAAAATTTTTTTGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12083#1 AGAGGCCGAGCCAAGGGGTTGTTAGCACCCTCCGTAACTGTTTTTTTGAAGCAGATACCC AAATCCAAAATTTGCTCTCTTTAGCAGAATATATTTGGCCACCTCTACTTTTGCCCGTAG CTGGAAAGAAGATCTCCAGTGAAGAATATAGATCAAAAATGCCTCCTGAGCTTGCAAATG CACTTTCCCATGAACGAGAGGCTGTTGAGATCTTTGAATTTCGGCAACAGGCACGTGGGG CTATTTATATGATTGTCCTTCAGGATAAAGGACGAAGGGCCTTTTGGTCAGTCAATGGTC CGCGAATACTGCAGGTTGGTTATGAAGACGAGGGGGCCCCAAAAGTTATGGAAGCATACG AGTTAATTGGTTCTTTGCTTGTTGGCAAGGGGGGTGATGACCAAGTTCAAGAACAAGGAG GACAGAAGCCTTAATTTTTGCTGTTTAGAAAAAAAAATTCAGTCCTCCATCGTGTCCAAT TTTTTTCTATTTTTCAGTTGTTGCAAAAACTGGGATACAGTGCAATGTTTCCTTACTCAA TTGTTGTATTATGGACAAAATTTTTTTGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12083#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence
                              [GCCGCTCAAATATATTCTGCTAGAGAGAGCAAATTTTGTATTTGGGTATCAGCTTCAAAGCAACAGTTACGGATGGTGCTAACAACCCCTTTCTTTCTAAGTTGGTTTGTTGAATCAGATTGCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAACTCTGAAATTCGGCAACAGGCACTTGAGGCTATTTATATGATTGTCCTTCAGGATGAAGGACGAAGGGCTTTTTGGTCAGTCAATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGAGGACCCAAAAGTGATGGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCAAGATCAAGAACAAGGAGGACAGAAGCCTTAATTTCTGCTGTTTAAAAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTGCAAAAACTGGGCTACATTGCAATGCTACCGTAATCAATGGTTGTA]

[+] EMBL AU225770             [GCCGCTCAAATATATTCTGCTAGAGAGAGCAAATTTTGTATTTGGGTATCAGCTTCAAAGCAACAGTTACGGATGGTGCTAACAACCCCTTTCTTTCTAAGTTGGTTTGTTGAATCAGATTGCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAATGCCTCCTGAGCTTGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAACTCTGAAATTCGGCAACAGGCACTTGAGGCTATTTATATGATTGTCCTTCAGGATGAAGGACGAAGGGCTTTTTGGTCAGTCAATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGAGGACCCAAAAGTGATGGAAGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCAAGATCAAGAACAAGGAGGACAGAAGCCTTAATTTCTGCTGTTTAAAAAAAAAAAATTCAGTCCTCCATCGTGTACAATATTCTTCTATTTATCAGTTGTTGCAAAAACTGGGCTACATTGCAATGCTACCGTAATCAATGGTTGTA]


>consensus_12083#2 GCCGCTCAAATATATTCTGCTAGAGAGAGCAAATTTTGTATTTGGGTATCAGCTTCAAAG CAACAGTTACGGATGGTGCTAACAACCCCTTTCTTTCTAAGTTGGTTTGTTGAATCAGAT TGCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAATGCCTCCTGAGCT TGCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAACTCTGAAATTCGGCAACAGGC ACTTGAGGCTATTTATATGATTGTCCTTCAGGATGAAGGACGAAGGGCTTTTTGGTCAGT CAATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGAGGACCCAAAAGTGATGGA AGCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCAAGATCAAGA ACAAGGAGGACAGAAGCCTTAATTTCTGCTGTTTAAAAAAAAAAAATTCAGTCCTCCATC GTGTACAATATTCTTCTATTTATCAGTTGTTGCAAAAACTGGGCTACATTGCAATGCTAC CGTAATCAATGGTTGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12083#0      GCCATGGCCGACGAGCTCGACGAACTCCTCGGCTTCCTCTCCTCTCCCCAGCCAAACGTG 60
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      CGCGGCGCGGCGGCGGGCATCGTGCGGGGGCTGACGGGCGACGCGGACGGCCTGCGCGCC 120
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      CTCTCGGCGCGCGCCGACCGCGCGCTGCCGGCGCTGCTCCGGCTGCTGGCGTCCGCGGGG 180
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      GGCGAGCTGGGCACGGGGGGAGCGGCGGCGGACTCGCTCGTCAACCTCAGCCAGGACGGC 240
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      GCGCTCTCGGCCCGCCTCGTGTCGCTCGGCGCCGTCGTGGCCGCCATGGACGTCGTGGCC 300
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      AAGCGCGGCGGGGAGCAGCCGGGCCTCGCGCGCAGCCTCGTCATGCTGCTCGCCAACCTC 360
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      ACCCAGGTCGACTCCGGCGTCGCGGCCCTCCTCCAGGTTGGAGATGAAAAGATGCAAGGA 420
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      CTGTATGTTGCAAAGCTTGTGCGGTCATTCTGCAGGTCATCCAGTGAGTCTGAAGAGGAA 480
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      GATATCTTTGAACATGTTGCTTCTATATTAGTGAACATCTCAAAGGTTGAAGCTGGAAGG 540
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      AGAATACTGATGGAACCTAAGAGAGGCCTTTTAAAACAGATTATACGGCAATCTGATTCA 600
consensus_12083#1      ------------------------------------------------------------
consensus_12083#2      ------------------------------------------------------GCCGCT 6
                                                                                   

consensus_12083#0      ACAAACCAACTTAGAAAGAAAGGGGTTGTTAGCACCATCCGTAACTGTTGCTTTGAAGCT 660
consensus_12083#1      -------AGAGGCCGAGCCAAGGGGTTGTTAGCACCCTCCGTAACTGTTTTTTTGAAGCA 53
consensus_12083#2      CAAATATATTCTGCTAGAGAGAGCAAATTTTGTATT-TGGGTATCAGCTTCAAAGCAACA 65
                              *       *   *  *     ** * *   *  *** * * *     * * * 

consensus_12083#0      GATACCCAAATACAAAATTTGCTCTCTCTAGCAGAATATATTTGGCCAGCTCTACTTTTG 720
consensus_12083#1      GATACCCAAATCCAAAATTTGCTCTCTTTAGCAGAATATATTTGGCCACCTCTACTTTTG 113
consensus_12083#2      GTTACGGATGGTGCTAACAACCCCTTTCTTTCTAAGTTGGTTTGTTGAATCAGATTG--- 122
                       * ***  *       **    * ** * *  *  * *   ****   *     * *    

consensus_12083#0      CCCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAATGCCTCCTGAGCTT 780
consensus_12083#1      CCCGTAGCTGGAAAGAAGATCTCCAGTGAAGAATATAGATCAAAAATGCCTCCTGAGCTT 173
consensus_12083#2      -CCGTAGCTGGAAAGAAGATCTACAGTGAAGAAGATAGATCAAAAATGCCTCCTGAGCTT 181
                        ********************* ********** **************************

consensus_12083#0      GCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAACTCTGAAATTCGGCAACAGGCA 840
consensus_12083#1      GCAAATGCACTTTCCCATGAACGAGAGGCTGTTGAGATCTTTGAATTTCGGCAACAGGCA 233
consensus_12083#2      GCAAATGCACTCTCCCATGAACGAGAGGCTGTTGAGAACTCTGAAATTCGGCAACAGGCA 241
                       *********** ************************* ** **** **************

consensus_12083#0      CTTGAGGCTATTTATATGATTGTCCTTCAGGATGAAGGACGAAGGGCTTTTTGGTCAGTC 900
consensus_12083#1      CGTGGGGCTATTTATATGATTGTCCTTCAGGATAAAGGACGAAGGGCCTTTTGGTCAGTC 293
consensus_12083#2      CTTGAGGCTATTTATATGATTGTCCTTCAGGATGAAGGACGAAGGGCTTTTTGGTCAGTC 301
                       * ** **************************** ************* ************

consensus_12083#0      AATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGAGGACCCAAAAGTGATGGAA 960
consensus_12083#1      AATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGGGGCCCCAAAAGTTATGGAA 353
consensus_12083#2      AATGGTCCGCGAATACTGCAGGTTGGTTATGAAGACGAGGAGGACCCAAAAGTGATGGAA 361
                       **************************************** ** ********* ******

consensus_12083#0      GCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCAAGATCAAGAA 1020
consensus_12083#1      GCATACGAGTTAATTGGTTCTTTGCTTGTTGGCAAGGGGGGTGATGACCAAGTTCAAGAA 413
consensus_12083#2      GCATACGAGTTAATTGGATCTCTGCTTGTTGGCAAGGGTGATGATGAGCAAGATCAAGAA 421
                       ***************** *** **************** * ****** **** *******

consensus_12083#0      CAAGGAGGACAGAAGCCTTAATTTCTGCTGTTTAGAAAAAAAAAATTCAGTCCTCCATCG 1080
consensus_12083#1      CAAGGAGGACAGAAGCCTTAATTTTTGCTGTTTAGAAAAAAAAA-TTCAGTCCTCCATCG 472
consensus_12083#2      CAAGGAGGACAGAAGCCTTAATTTCTGCTGTTTAAAAAAAAAAAATTCAGTCCTCCATCG 481
                       ************************ ********* ********* ***************

consensus_12083#0      TGTACAATATTCTTCTATTTATCAGTTGTTGCAAAAACTGGGCTACATTGCAATGCTACC 1140
consensus_12083#1      TGTCCAATTTTTTTCTATTTTTCAGTTGTTGCAAAAACTGGGATACAGTGCAATGTTTCC 532
consensus_12083#2      TGTACAATATTCTTCTATTTATCAGTTGTTGCAAAAACTGGGCTACATTGCAATGCTACC 541
                       *** **** ** ******** ********************* **** ******* * **

consensus_12083#0      GTAATCAATTGTTGTATTATGGACAAAATTTTTTTGCACCATTTGGCAGGTTTTTCCCTG 1200
consensus_12083#1      TTACTCAATTGTTGTATTATGGACAAAATTTTTTTGCCCCAAAAAAAAAAAAAAAAAAAA 592
consensus_12083#2      GTAATCAATGGTTGTA-------------------------------------------- 557
                        ** ***** ******                                            

consensus_12083#0      GCTTAAAGCTATCAAGAGTTCTCCATACAATTATGTAAGAACATGGAGAAATATGCATAA 1260
consensus_12083#1      AAAAAAA----------------------------------------------------- 599
consensus_12083#2      ------------------------------------------------------------
                                                                                   

consensus_12083#0      ACAGAGCAATTTGCCCACTTTTCAATTAAAAGA 1293
consensus_12083#1      ---------------------------------
consensus_12083#2      ---------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)