These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12084#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1663 fasta sequence [ACTTTTCTAAGGGAAAGTAGCCGGTGGTAACGGTGAACAAGTTTTAAGCAGAGATGTGTACCGCTCTGGGGCAGCTGTTTGACTTCTTTAGGATGCTTACTTTCTTTTTCACCACAGTTGGTTATTATGTCTGCACAATGATGACCGTTTCTAACTGTGTATATCTTTTTGTATGGAAGGGTTTATCTGGCACTCTCTGGGCTCGACTATGAAATATCTCGTCAATTTAGGTTTCTGGGAAACACTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACTGCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGATTTATTACAATGCAACTGCATTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTATAACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGGAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC-ATGGTTC-CCCTTCGTA-TCCACCTTC-CAGTCACGTTTCCTGTTTAAT-CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA-TTGATT-AG-TGGTACTTGATTTGAACAACACCTTTGTACATAACTG-CCTG-CCA-TTTTAGGAGCAAATTATGTATCCAAACTAA-CAGTG-CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT-AATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCAAAAA] [+] EMBL CB684140 [ACTTTTCTAAGGGAAAGTAGCCGGTGGTAACGGTGAACAAGTTTTAAGCAGAGATGTGTACCGCTCTGGGGCAGCTGTTTGACTTCTTTAGGATGCTTACTTTCTTTTTCACCACAGTTGGTTATTATGTCTGCACAATGATGACCGTTTCTAACTGTGTATATCTTTTTGTATGGAAGGGTTTATCTGGCACTCTCTGGGCTCGACTATGAAATATCTCGTCAATTTAGGTTTCTGGGAAACACTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACTGCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGATTTATTACAATGCAACTGCATTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTATAACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTACAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGGTCATCTTCCTTTATTCTATTAACTATCAGTATTTGGTTCCTCATCGTGTCCTGTCTCTTCACACCATACATTTTCAACCCTT ] [+] EMBL AK071856 [ CTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACTGCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGTTTTATTACAATGCAACTGCAGTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTAGAACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAACCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGGAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGC ] [+] EMBL AK059569 [ TTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGGAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGCGACAATTCAGATAGCCTGATT ] [+] EMBL BE230772 [ GCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGRGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTNATTTTCCAATATGGCATTGTTat ] [-] EMBL CB684141 [ GGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGAAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATGATGTATCCAAACTAA CAGTG CCAT ] [+] EMBL AU174199 [ CCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCAAAAA] [+] EMBL AU033035 [ tcntcTGTGCCTNTTGTGTTTTTNTCAATGGTTCNCCCTTCGTATTCCACCTTCACAGTCACGTTTCCTGTTTANTCCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGANACAAGGCAAATCAGGAGGCNTGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGNATATTCTTGGAA CTGATT AG TGGTACTTGATTTGAACAANACCTTTGTNCATNNCTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CNATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCAAAAA] [+] EMBL BI807066 [ ATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAATTTGATTAAGTTGGTAC TGATTTGAACCACACCTTTGTACATAACTGCCCTGCCCATTTTTAGGAGCAAATTATGTATCCAAACTAACCAGTGCCCATCCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTA CCGTAACGACCTGTAATTTGAACATTCCGGTAAATTTGGATGCG C ATTCAGATAGCCaaaaaaaaa ] consensusID : consensus_12084#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence [CAGTATATAAACCCTATATGGCTTATTGAGAACTAAACATTAGTTACGTCACTTGTGCATGCTTAGTAGTGTATCTCTTTCAAACTTGCTTGTATGTGTTATCTAATCTGCAGGATTCAATTCGACTCTGCGCCAGGGAAATATCACACACCATGAATATATCCAGGCTATCTGTTTAATATTTTTGCACTGCGAATGTGTATAACATGAATAATGTGCACTCATTATGATTTGTGTATGAGATTGGTCCTGAGGATTTTAAATATGCATGGTTTTGGAATATGGCATGTGCACTTGCATTTTTTTTGTTAGCATGTCTGGTACAGAGAATTAAGCGGCTTGGACGCGTATTACACATACATCAATATGGTCTTCCCTTTTCTTGGGCATGCAAATTAGCAAATGCACTTGAACAGATGAACTAAACTTTCTTACACTTTTGATTTATTTTTTTTTGGAAGTGCAGGTTAACATATTTGCGTAATGGGTGCATATGTCATCTTGTGTACACTTGCATTTTAAAATCAGTATATCTTTGTTATCATTTCCCAAAATAATAATCTAACAATCTATTTCACTTCTTTTAAGGNTGGGAAAGGACGAGATGTTGGTCTGAACCAAATAGCACTTTTCGAAGGGAAAGTAGCCCGGTGGTAACGGNGAACAAGTTTTAAGCAGAGATGTGTACCGTCTGGGGCAGCTGGTTGACTTCCTTTAGGATGCCTTACTTTTCTTTT] [+] EMBL CA764969 [CAGTATATAAACCCTATATGGCTTATTGAGAACTAAACATTAGTTACGTCACTTGTGCATGCTTAGTAGTGTATCTCTTTCAAACTTGCTTGTATGTGTTATCTAATCTGCAGGATTCAATTCGACTCTGCGCCAGGGAAATATCACACACCATGAATATATCCAGGCTATCTGTTTAATATTTTTGCACTGCGAATGTGTATAACATGAATAATGTGCACTCATTATGATTTGTGTATGAGATTGGTCCTGAGGATTTTAAATATGCATGGTTTTGGAATATGGCATGTGCACTTGCATTTTTTTTGTTAGCATGTCTGGTACAGAGAATTAAGCGGCTTGGACGCGTATTACACATACATCAATATGGTCTTCCCTTTTCTTGGGCATGCAAATTAGCAAATGCACTTGAACAGATGAACTAAACTTTCTTACACTTTTGATTTATTTTTTTTTGGAAGTGCAGGTTAACATATTTGCGTAATGGGTGCATATGTCATCTTGTGTACACTTGCATTTTAAAATCAGTATATCTTTGTTATCATTTCCCAAAATAATAATCTAACAATCTATTTCACTTCTTTTAAGGNTGGGAAAGGACGAGATGTTGGTCTGAACCAAATAGCACTTTTCGAAGGGAAAGTAGCCCGGTGGTAACGGNGAACAAGTTTTAAGCAGAGATGTGTACCGTCTGGGGCAGCTGGTTGACTTCCTTTAGGATGCCTTACTTTTCTTTT] consensusID : consensus_12084#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence [ATTANCCNCTGCNAATTNGTNGGTTAANAGGCTCCTGGATGGAGANGCGGATGTTAATTATGGNATGACAAAGTTAACATTGNNGATNATTGGCAGGGGGGTGGTTTTGTANCAATGGGAGGNGTGTTNAATGTTGGCNGTCACATGGAGCGCTTGNGAAATTGGTTGGGTTTTGGGATCAGTCCGTGAGAAGTTCGGATGTATGATGCCGGAATGGTGCTCTCATCTTAGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCCACCTTCCAGTCACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTTTGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGCCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGTAATTTGGATGCGAC] [-] EMBL BE229051 [ATTANCCNCTGCNAATTNGTNGGTTAANAGGCTCCTGGATGGAGANGCGGATGTTAATTATGGNATGACAAAGTTAACATTGNNGATNATTGGCAGGGGGGTGGTTTTGTANCAATGGGAGGNGTGTTNAATGTTGGCNGTCACATGGAGCGCTTGNGAAATTGGTTGGGTTTTGGGATCAGTCCGTGAGAAGTTCGGATGTATGATGCCGGAATGGTGCTCTCATCTTAGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCCACCTTCCAGTCACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTTTGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGCCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGTAATTTGGATGCGAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12084#0 ACTTTTCTAAGGGAAAGTAGCCGGTGGTAACGGTGAACAAGTTTTAAGCAGAGATGTGTA 60 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 CCGCTCTGGGGCAGCTGTTTGACTTCTTTAGGATGCTTACTTTCTTTTTCACCACAGTTG 120 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 GTTATTATGTCTGCACAATGATGACCGTTTCTAACTGTGTATATCTTTTTGTATGGAAGG 180 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 GTTTATCTGGCACTCTCTGGGCTCGACTATGAAATATCTCGTCAATTTAGGTTTCTGGGA 240 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 AACACTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACT 300 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 GCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGA 360 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 TTTATTACAATGCAACTGCATTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTATA 420 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 ACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGA 480 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 GGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCAC 540 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 TTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACA 600 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 AGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCC 660 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 TGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAG 720 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 GACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAA 780 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 AACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGT 840 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 ATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAG 900 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 ------------------------------------------------------------ consensus_12084#0 CTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTT 960 consensus_12084#2 ------------------------------------------------------------ consensus_12084#1 -------------CAGTATATAAACCCTATATGGCTTATTGAGAACTAAACATTAGTTAC 47 consensus_12084#0 CTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTC---CGAAGAAGTCAACCGCC 1017 consensus_12084#2 -----------------------------------------------------------A 1 consensus_12084#1 GTCACTTGTGCATGCTTAGTAGTGTATCTCTTTCAAACTTGCTTGTATGTGTTATCTAAT 107 consensus_12084#0 TTGCCAACTTTTGTTCGGTTT----CTACAGGGCCTCCTTGCGATTGGAATGATTGCAGG 1073 consensus_12084#2 TTANCCNCTGCNAATTNGTNG----GTTAANAGGCTCCT--------GGATGGAGANGCG 49 consensus_12084#1 CTGCAGGATTCAATTCGACTCTGCGCCAGGGAAATATCACACACCATGAATATATCCAGG 167 * * * * * ** * consensus_12084#0 A-ATTGCTCTACT--TATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGC 1130 consensus_12084#2 G-ATG---TTAAT--TATGGNAT-GACAAAGTTAACA-TTGNNGATN-ATTGGCAGGGGG 100 consensus_12084#1 CTATCTGTTTAATATTTTTGCACTGCGAATGTGTATAAC--ATGAATAATGTGCACTCAT 225 ** ** * * * * * * ** ** * * ** ** *** consensus_12084#0 GCTTGCTTTTGTAGCAACTGGATGGTGTG--TTCTATGTCTGGCTGTCACATGGAAGCGC 1188 consensus_12084#2 G--TGGTTTTGTANCAA-TGGGAGGNGTG--TTNAATGT-TGGCNGTCACATGGA-GCGC 153 consensus_12084#1 TATGATTTGTGTATGAGATTGGTCCTGAGGATTTTAAATATGCATGGTTTTGGAATATGG 285 ** **** * * * * * ** * * ** * * * * consensus_12084#0 CTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCC 1248 consensus_12084#2 -TTGNGAAATTGGTTGGGTTTTGGGA-TCAGTCCGTGAGAA-GTTCGGATGTATGATGCC 210 consensus_12084#1 CATGTGCACTTGCATTTTTTTTG----TTAGCATGTCTGGT-ACAGAGAATTAAGCGGCT 340 * * * ** * * ** * ** ** * ** ** * ** consensus_12084#0 GGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCC 1308 consensus_12084#2 GGAATGG-TGCTCTCATCTTAGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCC 269 consensus_12084#1 TGGACGCGTA-TTACACATACAT---CAATATGGTCTTCCCTT--TTCTTGGGCATGCAA 394 * * * * * ** * * ** * ** **** * * *** * * consensus_12084#0 ACCTTCCAGT-CACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCT 1367 consensus_12084#2 ACCTTCCAGT-CACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCT 328 consensus_12084#1 ATTAGCAAATGCACTTGAACAGATGAACTAAACTTTCT----TACACTTTTGATTTATTT 450 * * * * *** * * * * ** ** ***** * ** *** * * consensus_12084#0 CATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCT 1427 consensus_12084#2 CATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCT 388 consensus_12084#1 TTTTTTGGAAGT-------GCAGGTTAACATATTTGCGTAATGGGTGCATATGTCATCTT 503 * **** ** *** * * * ** * ** * * * * consensus_12084#0 GGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTT 1487 consensus_12084#2 GGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTT 448 consensus_12084#1 GTGTACACTTGCATTTTAAAATCAGTATATCTTTGTTATCATTTCCCAAAATAATAATCT 563 * ** *** * ** * * ** ** ** * ** ** ** * * consensus_12084#0 -----TGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGC 1542 consensus_12084#2 -----TGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGC 503 consensus_12084#1 AACAATCTATTTCACTTCTTTTAAGGNTGGGAAAGGACGAGATGTTGGTCTGAACCAAAT 623 * ** * *** * * * * *** * * * * *** consensus_12084#0 CATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCC--GTAACGACCTGTAATT 1600 consensus_12084#2 CATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCC--GTAACGACCTGTAATT 561 consensus_12084#1 AGCACTTTTCGAAGGGAAAGTAGCCCGGTGGTAACGGNGAACAAGTTTTAAGCAGAGATG 683 * * * * **** * * * * * ** * * * ** consensus_12084#0 TGAACATTCCGGTA-ATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCA 1659 consensus_12084#2 TGAACATTCCGGTA-ATTTGGATGCGAC-------------------------------- 588 consensus_12084#1 TGTACCGTCTGGGGCAGCTGGTTGACTTCCTTTAGGATGCCTTACTTTTCTTTT------ 737 ** ** ** ** * *** ** consensus_12084#0 AAAA 1663 consensus_12084#2 ---- consensus_12084#1 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||