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Oryza sativa
cluster # 12097 cluster # 12097       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12097#0 length = 980 sequences # 5  
consensus_12097#1 length = 662 sequences # 2  
consensus_12097#2 length = 614 sequences # 1  
consensus_12097#3 length = 526 sequences # 1  
consensus_12097#4 length = 282 sequences # 1  

consensusID : consensus_12097#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 980
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAAAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAAAAAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAAACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTTTCAGCTCTCGCTTTTGTATTTTTTTTGGTGGGGGAGGGGACCTTTTTCCCTTTGCCGGAAGCCACACCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACGAAACCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTTGCAACCCC-TCTCCACCTCCTCCCGCCCGCACCCTCTGCATCCCCTGAAGTTGGGGTCATCCCTGTAGCTGACAAATTCAGTCTCAGAAACTGCTACTCCTTCCTCTTGAGAGGAGGAAGCAGCAGCAACTGCCTCTTGCTCCTTGGTCACCACAGAAGCAGAAGAGTTGGATGAGCTGCTGCTGCTGCACAGAATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAGAGCTGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAGGGAGCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCTCCTCCCGGTGAGGTGAGAGAGAGAGAGAAATGGAGGTGGAAATTTTCTACTCCTTCAGTCCAGTCAGGTCCAAGGGCGAA]

[+] EMBL CF335205             [TTTTTTTTTTTTTTTTTTTTTTTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAAAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAAAAAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAAACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTTTCAGCTCTCGCTTTTGTATTTTTTTTGGTGGGGGAGGGGACCTTTTTCCCTTTGCCGGAAGCCACACCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACGAAACCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF334787             [                                                                                                                                                                                                                                                                                                                                                                                                                 ACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACGAAGCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTTGCAACCCC TCTCCACCTCCTCCCGCCCGCACCCTCTGCATCCCCTGAAGTTGGGGTCATCCCTGTAGCTGACAAATTCAGTCTCAGAAACTGCTACTCCTTCCTCTTGAGAGGAGGAAGCAGCAGCAACTGCCTCTTGCTCCTTGGTCACCACAGAAGCAGAAGAGTTGGATGAGCTGCTGCTGCTGCACAGAATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAGAGCTGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAGGGAGCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCTCCTCCCGGTGAGGTGAGAGAGAGAGAGAA                                                   ]
[-] EMBL CF297013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGTTATGCCGCCCTGGATCCGCCCCTCGCCGTTGCAACCCCTTNTCCACCTCCTCCCGCCCGCACCCTNTGCATCCCCTGAAGTTGGGGTCATCCCTGTAGCTGACAAATTCAGTCTCAGAAACTGCTACTCCTTCCTCTTGAGAGGAGGAAGCAGCAGCAACTGCCTCTTACTCCTTGGTCACCACAGAAGCAGAAGAGTTGGATGAGCTGCTGCTGCTGCACAGAATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAGAGCTGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAGGGAGCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCTCCTCCCGGTGAGGTGAGAGAGAGAGAGAA                                                   ]
[-] EMBL C72979               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gCTTGATA GCCACCA CCGAAGCC GGGACGGTTGCTATGCCGCCCTGGATCCGCCCTTCGCCGTTGCAACCCN TCTCCACCTCCTCCCGCCCGCACCCTCTGCATCCCCTGAAGTTGGGGTCATCCCTGTAGCTGACAAATTCAGTCTCAGAAACTGCTACTCCTTCCTCTTGAGAGGAGGAAGCAGCAGCAACTGCCTCTTGCTCCTTGGTCACCACAGAAGCAGAAGAGTTGGATGAGCTGCTGCTGCTGCACAGAATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAGAGCTGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAGGGAGCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCTCCT                                                                             ]
[-] EMBL CF335204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAGAGCTGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAGGGAGCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCTCCTCCCGGTGAGGTGAGAGAGAGAGAGAAATGGAGGTGGAAATTTTCTACTCCTTCAGTCCAGTCAGGTCCAAGGGCGAA]


>consensus_12097#0 TTTTTTTTTTTTTTTTTTTTTTTAAATCAACAATCTGATATTGCTACTCTTATCATAGGA TAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAAC CCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAAAGTTTTGCAGGCTGGGGT TGAAGTTTTGAACATCCTTGTCCAGCCTAAAAAATGTTAAAAATCTGAAATAATTCTGGA AGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAAACAAATTTGCTTA CATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTTTCAGCTCTCGCTTTTGTATTTT TTTTGGTGGGGGAGGGGACCTTTTTCCCTTTGCCGGAAGCCACACCGTCCATGCTCTGCC CCTGCCTCCGGTACCGGCCGCCGGAGGCGACGAAACCGGGGCACGGCCGGTACGCCTTGA TAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGT TGCAACCCCTCTCCACCTCCTCCCGCCCGCACCCTCTGCATCCCCTGAAGTTGGGGTCAT CCCTGTAGCTGACAAATTCAGTCTCAGAAACTGCTACTCCTTCCTCTTGAGAGGAGGAAG CAGCAGCAACTGCCTCTTGCTCCTTGGTCACCACAGAAGCAGAAGAGTTGGATGAGCTGC TGCTGCTGCACAGAATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAG AGCTGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAG GGAGCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCT CCTCCCGGTGAGGTGAGAGAGAGAGAGAAATGGAGGTGGAAATTTTCTACTCCTTCAGTC CAGTCAGGTCCAAGGGCGAA



consensusID : consensus_12097#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 662
fasta sequence
                              [TTTTTTTTTTTTCGCAGGGTCAAGGCTCAATAGTAATCAGGCCAGTAAATCAACAATCCGATATTGCTACTTTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCAAAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGGATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACAAACCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTGTGCACCCCTCTGCCTTCTGCGACGGCAAGGACGGCAACAAGGGAGCCGTCCCCCTTGTCTCGGCCTTGGCTCACTAATCAGGCTTATCGATACCGGGA]

[+] EMBL CA763441             [TTTTTTTTTTTTCGCAGGGTCAAGGCTCAATAGTAATCAGGCCAGTAAATCAACAATCCGATATTGCTACTTTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCAAAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGGATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACAAACCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTGTGCACCCCTCTGCCTTCTGCGACGGCAAGGACGGCAACAAGGGAGCCGTCCCCCTTGTCTCGGCCTTGGCTCACTAATCAGGCTTATCGATACCGGGA]
[+] EMBL CA763440             [TTTTTTTTTTTTCGCAGGGTCAAGGCTCAATAGTAATCAGGCCAGTAAATCAACAATCCGATATTGCTACTTTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCAAAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGGATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACAAACCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTGTGCACCCCTCTGCCTTCTGCGACGGCAAGGACGGCAACAAGGGAGCCGTCCCCCTTGTCTCGGCCTTGGCTCACTAATCAGGCTTATCGATACCGGGA]


>consensus_12097#1 TTTTTTTTTTTTCGCAGGGTCAAGGCTCAATAGTAATCAGGCCAGTAAATCAACAATCCG ATATTGCTACTTTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTAT TACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGC TACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGT TAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGAT CACCTCAAAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCT CTCAGCTCTCGCTTTTGGATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGA AGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACAAACCC GGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCC GCCCTGGATCCGCCCCTCGCCGTGTGCACCCCTCTGCCTTCTGCGACGGCAAGGACGGCA ACAAGGGAGCCGTCCCCCTTGTCTCGGCCTTGGCTCACTAATCAGGCTTATCGATACCGG GA



consensusID : consensus_12097#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence
                              [TTTTTTTTTTTTTACCAGTCTAATGTTTTTTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGCTCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGTATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGNCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGACGGAAGCCGGGGCACGGCCGGTACGCCTTGATAGGGCACCACCCGAAGNCGGGGACGGTGGCTATGCGGCCTGGATNCGC]

[-] EMBL AU082675             [TTTTTTTTTTTTTACCAGTCTAATGTTTTTTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGCTCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGTATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGNCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGACGGAAGCCGGGGCACGGCCGGTACGCCTTGATAGGGCACCACCCGAAGNCGGGGACGGTGGCTATGCGGCCTGGATNCGC]


>consensus_12097#2 TTTTTTTTTTTTTACCAGTCTAATGTTTTTTGCCGTTGTTCATAATACATTCAGCAACAG CATTACCAATAATGTCGCAGTGTCAAGGCTCAATAGTAATCAAGCCAGTAAATCAACAAT CTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGC TATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTC AGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAA TGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTT GATCACCTCATAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCA CCTCTCAGCTCTCGCTTTTGTATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCC GGAAGCCACATCGNCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGACGGAAG CCGGGGCACGGCCGGTACGCCTTGATAGGGCACCACCCGAAGNCGGGGACGGTGGCTATG CGGCCTGGATNCGC



consensusID : consensus_12097#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 526
fasta sequence
                              [TTTTTTTTTTTTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGTATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACGAAGCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTTGCAACCCCTCTCCAC]

[-] EMBL CK085306             [TTTTTTTTTTTTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGTATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGACGAAGCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTTGCAACCCCTCTCCAC]


>consensus_12097#3 TTTTTTTTTTTTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATT TCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTA CGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGAAGTTTTGAACATCCTTGTCCAGCCTAG AGAATGTTAAAAATCTGAAATAATTCTGGAAGCCATCCTTGGTGATGCACACTGCCTCCT ACTTGATCACCTCATAGACAAATTTGCTTACATTTCCAGGCTTGAAATTTCTTGGACTGG ATCACCTCTCAGCTCTCGCTTTTGTATTTTTTTTGTTGTTGGAGGGGACCTTCTTCCCTC TGCCGGAAGCCACATCGTCCATGCTCTGCCCCTGCCTCCGGTACCGGCCGCCGGAGGCGA CGAAGCCGGGGCACGGCCGGTACGCCTTGATAGGCCACCACCCGAAGCCGGGGACGGTGG CTATGCCGCCCTGGATCCGCCCCTCGCCGTTGCAACCCCTCTCCAC



consensusID : consensus_12097#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 282
fasta sequence
                              [TTTTTTTGAAGCCAAAAATGATTTTATTTTAGGACGGAGGGAGTACCAGTCTAATGTTTTTTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGCTCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGT]

[+] EMBL CF297014             [TTTTTTTGAAGCCAAAAATGATTTTATTTTAGGACGGAGGGAGTACCAGTCTAATGTTTTTTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGCTCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAGTAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCATGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGT]


>consensus_12097#4 TTTTTTTGAAGCCAAAAATGATTTTATTTTAGGACGGAGGGAGTACCAGTCTAATGTTTT TTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGC TCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAG TAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCA TGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12097#0      ------------------------------------------------------------
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ------------------------------------------------------------
consensus_12097#2      -------------------------------TTTTTTTTTTTTTACCAGTCTAATGTTTT 29
consensus_12097#4      TTTTTTTGAAGCCAAAAATGATTTTATTTTAGGACGGAGGGAGTACCAGTCTAATGTTTT 60
                                                                                   

consensus_12097#0      ---------------------------------------------------------TTT 3
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ----------------------------------TTTTTTTTTTTTCGCAGGGTCAAGGC 26
consensus_12097#2      TTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGC 89
consensus_12097#4      TTGCCGTTGTTCATAATACATTCAGCAACAGCATTACCAATAATGTCGCAGTGTCAAGGC 120
                                                                                   

consensus_12097#0      TTTTTTTTTTTTTTTTTTTTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAG 63
consensus_12097#3      ---------------------------TTTTTTTTTTTTGCTACTCTTATCATAGGATAG 33
consensus_12097#1      TCAATAGTAATCAGGCCAGTAAATCAACAATCCGATATTGCTACTTTTATCATAGGATAG 86
consensus_12097#2      TCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAG 149
consensus_12097#4      TCAATAGTAATCAAGCCAGTAAATCAACAATCTGATATTGCTACTCTTATCATAGGATAG 180
                                                     *    * ******** **************

consensus_12097#0      TAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCA 123
consensus_12097#3      TAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCA 93
consensus_12097#1      TAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCA 146
consensus_12097#2      TAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCA 209
consensus_12097#4      TAGTACTTTCAAAGTTTCGATACAATTTCGCTATTACACCTGGTAGCAATATGCAACCCA 240
                       ************************************************************

consensus_12097#0      TGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAAAGTTTTGCAGGCTGGGGTTGA 183
consensus_12097#3      TGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGA 153
consensus_12097#1      TGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGA 206
consensus_12097#2      TGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGTTTTGCAGGCTGGGGTTGA 269
consensus_12097#4      TGAATGCCATGAGGCACTGGGATATTACGTCAGCTACAGAGT------------------ 282
                       ************************************** ***                  

consensus_12097#0      AGTTTTGAACATCCTTGTCCAGCCTAAAAAATGTTAAAAATCTGAAATAATTCTGGAAGC 243
consensus_12097#3      AGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGC 213
consensus_12097#1      AGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGC 266
consensus_12097#2      AGTTTTGAACATCCTTGTCCAGCCTAGAGAATGTTAAAAATCTGAAATAATTCTGGAAGC 329
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      CATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAAACAAATTTGCTTACAT 303
consensus_12097#3      CATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAGACAAATTTGCTTACAT 273
consensus_12097#1      CATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCAAAGACAAATTTGCTTACAT 326
consensus_12097#2      CATCCTTGGTGATGCACACTGCCTCCTACTTGATCACCTCATAGACAAATTTGCTTACAT 389
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      TTCCAGGCTTGAAATTTCTTGGACTGGATCACCTTTCAGCTCTCGCTTTTGTATTTTTTT 363
consensus_12097#3      TTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGTATTTTTTT 333
consensus_12097#1      TTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGGATTTTTTT 386
consensus_12097#2      TTCCAGGCTTGAAATTTCTTGGACTGGATCACCTCTCAGCTCTCGCTTTTGTATTTTTTT 449
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      TGGTGGGGGAGGGGACCTTTTTCCCTTTGCCGGAAGCCACACCGTCCATGCTCTGCCCCT 423
consensus_12097#3      TGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCT 393
consensus_12097#1      TGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGTCCATGCTCTGCCCCT 446
consensus_12097#2      TGTTGTTGGAGGGGACCTTCTTCCCTCTGCCGGAAGCCACATCGNCCATGCTCTGCCCCT 509
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      GCCTCCGGTACCGGCCGCCGGAGGCGACGAAACCGGGGCACGGCCGGTACGCCTTGATAG 483
consensus_12097#3      GCCTCCGGTACCGGCCGCCGGAGGCGACGAAGCCGGGGCACGGCCGGTACGCCTTGATAG 453
consensus_12097#1      GCCTCCGGTACCGGCCGCCGGAGGCGACAAACCCGGGGCACGGCCGGTACGCCTTGATAG 506
consensus_12097#2      GCCTCCGGTACCGGCCGCCGGAGGACG-GAAGCCGGGGCACGGCCGGTACGCCTTGATAG 568
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      GCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTTGC 543
consensus_12097#3      GCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTTGC 513
consensus_12097#1      GCCACCACCCGAAGCCGGGGACGGTGGCTATGCCGCCCTGGATCCGCCCCTCGCCGTGTG 566
consensus_12097#2      GGCACCACCCGAAGNCGGGGACGGTGGCTATGCGGCC-TGGATNCGC------------- 614
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      AACCCCTCTCCACCTCCTCCCGCCCGCACCCTCTGCATCCCCTGAAGTTGGGGTCATCCC 603
consensus_12097#3      AACCCCTCTCCAC----------------------------------------------- 526
consensus_12097#1      CACCCCTCT--GCCTTCTGC-GACGGCAAGGACGGCAAC-----AAG--GGAGCCGTCCC 616
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      TGTAGCTGACAAATTCAGTCTCAGAAACTGCTACTCCTTCCTCTTGAGAGGAGGAAGCAG 663
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      CCTTGTC-------TCGGCCTTGGC--TCACTAATCAGGCTTATCGATACCGGGA----- 662
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      CAGCAACTGCCTCTTGCTCCTTGGTCACCACAGAAGCAGAAGAGTTGGATGAGCTGCTGC 723
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ------------------------------------------------------------
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      TGCTGCACAGAATGCTCCCTCTGGCCGCCTGTGGATGCTTCTTGCAGAGCAGTGAAGAGC 783
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ------------------------------------------------------------
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      TGAGGTTGCCTGTGAGGAAGACGGGGTTGTGGACGGCGGCAGAAGCAGGTGGAGCAGGGA 843
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ------------------------------------------------------------
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      GCTGCAGCCACAGGGAGGCCGCCATTGTTGCGCCTCCTGCCCTCTCCTCTGCTTCCTCCT 903
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ------------------------------------------------------------
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      CCCGGTGAGGTGAGAGAGAGAGAGAAATGGAGGTGGAAATTTTCTACTCCTTCAGTCCAG 963
consensus_12097#3      ------------------------------------------------------------
consensus_12097#1      ------------------------------------------------------------
consensus_12097#2      ------------------------------------------------------------
consensus_12097#4      ------------------------------------------------------------
                                                                                   

consensus_12097#0      TCAGGTCCAAGGGCGAA 980
consensus_12097#3      -----------------
consensus_12097#1      -----------------
consensus_12097#2      -----------------
consensus_12097#4      -----------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)