cluster # 12099

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12099 cluster # 12099 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12099#0 length = 907 sequences # 10
consensusID : consensus_12099#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 907
fasta sequence
                              [GGGCAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC-----AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTATCTTGGGCTATGTAAGGTTCTGGTTAAACTCGGAAGAGGCAAGGAGGCTATAAGTAGCTGTACAGAAG]

[+] EMBL CF305763             [GGGCAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTTAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAA                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF307200             [   CAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATG                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB675800             [                  ACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTCTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCAGCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTAT                                                                   ]
[+] EMBL C26691               [                     GCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTNCNCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGGGTACATCAcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU069419             [                            CGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAANGAATTATCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB621891             [                                                                   TGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTCTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAACTACGTGTGTCTGCTGAGGACTACAAGGCAGCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTAC                                                                           ]
[+] EMBL CB660234             [                                                                                                        CGCTCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTTAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGCTGGAGGTTGAACCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGCAGTCTAGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCAGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAGTTTGAGTCTCATGACTTCTCAAAAGTCCTGGATTACATCAACAAAATTGTGCTTGTTTTTTCTCCAGACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTAAAGACTACTCAACTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTTGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTATCTTGGGCTATGTAAGGTTCTGGTTAAACTCGGAAGAGGCAAGGAGGCTATAAGTAGCTGTACAGAAG]
[+] EMBL CB660277             [                                                                                                        CGCTCACCATTGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTTAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGCTGGAGGTTGAACCAAATCACTCACAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGCAGTCTAGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCAATGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTATAGTCTGCTTATGGCCAGTTTGAGTCTCATGACTTCTCAAAAGTCCTGGATTACATCAACAAAATTGTGCTTGTTTTTTCTCCAGACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTAAAGACTACTCAACTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTTGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAAGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTAT                                                                   ]
[+] EMBL CF304845             [                                                                                                            CAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGG                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB681304             [                                                                                                              AGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTTATAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGCTGGAGGTTGAACCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC     AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCAGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAGTTTGAGTCTCATGACTTCTCAAAAGTCCTGGATTACATCAACAAAATTGTGCTTGTTTTTTCTCCAGACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTAAAGACTACTCAACTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTTGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAACATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTATCTTGGGCTATGTAACGCTCTGGTTAAACTCGGAAGAGGCA                           ]




>consensus_12099#0
GGGCAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGG
AGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAA
GATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATAT
GATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCT
TACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGCAGGTACAAGGAAGCGGAGGGTGAC
TATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAA
CTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTC
TCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAG
GCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCA
GAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGC
CGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTT
CGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTG
AAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAG
GACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTAT
CTTGGGCTATGTAAGGTTCTGGTTAAACTCGGAAGAGGCAAGGAGGCTATAAGTAGCTGT
ACAGAAG
clustalw multiple alignements is not computed in this case