These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12099#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 907 fasta sequence [GGGCAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC-----AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTATCTTGGGCTATGTAAGGTTCTGGTTAAACTCGGAAGAGGCAAGGAGGCTATAAGTAGCTGTACAGAAG] [+] EMBL CF305763 [GGGCAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTTAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAA ] [+] EMBL CF307200 [ CAGAACTAAGAGAGCACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATG ] [+] EMBL CB675800 [ ACGGCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTCTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCAGCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTAT ] [+] EMBL C26691 [ GCGGCGGCGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTNCNCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGGGTACATCAcc ] [+] EMBL AU069419 [ CGGCGGCGATGGCGCGGTGGCCGTGGAGGTGGAGGGTGCTGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAANGAATTATCTCAA ] [+] EMBL CB621891 [ TGCTGCCGCTGCTTCTCCTTCACTCCTCCCCCGTCTTCGCGCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTCGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTCTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAACTACGTGTGTCTGCTGAGGACTACAAGGCAGCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTAC ] [+] EMBL CB660234 [ CGCTCAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTTAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGCTGGAGGTTGAACCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGCAGTCTAGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCAGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAGTTTGAGTCTCATGACTTCTCAAAAGTCCTGGATTACATCAACAAAATTGTGCTTGTTTTTTCTCCAGACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTAAAGACTACTCAACTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTTGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTATCTTGGGCTATGTAAGGTTCTGGTTAAACTCGGAAGAGGCAAGGAGGCTATAAGTAGCTGTACAGAAG] [+] EMBL CB660277 [ CGCTCACCATTGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTTAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGCTGGAGGTTGAACCAAATCACTCACAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGCAGTCTAGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCAATGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTATAGTCTGCTTATGGCCAGTTTGAGTCTCATGACTTCTCAAAAGTCCTGGATTACATCAACAAAATTGTGCTTGTTTTTTCTCCAGACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTAAAGACTACTCAACTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTTGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAAGATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAAGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTAT ] [+] EMBL CF304845 [ CAAGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTCAGAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGTTGGAGGTTGACCCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCTGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAATTTGAATCTCATGACTTCTCAAAAGTCCTGGAGTACATCAACAAAATTGTGCTTGTTTTTTCTCCAAACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTGAAGACTACTCAAGTGTTATCTCAGAAACAGG ] [+] EMBL CB681304 [ AGAAGGCCAAGATAATGATCCCTCTACTTTGTTCAAACGAGCCTTATAAATGATGAACCTAAGGAAATATGATGGATCACTTGGTCTGCTAAATGCTGTGCTGGAGGTTGAACCAAATCACTCAGAAGCTTACAGGCAGCGTGCATCTGTGCTTCGTCACAAGTGC AGGTACAAGGAAGCGGAGGGTGACTATAGCAAATACCTGGAGCTAAAACCTGGGAGTTCTTCAGTGGAAAAGGAATTATCTCAACTGCTTCAGGCTCAAAATGCATTAGAGTCTGCTTATGGCCAGTTTGAGTCTCATGACTTCTCAAAAGTCCTGGATTACATCAACAAAATTGTGCTTGTTTTTTCTCCAGACTGCTTAAAGGCGAAGCTTCTCAAGGCTAAAGCATTGCTAGCACTTAAAGACTACTCAACTGTTATCTCAGAAACAGGATTTATTCTGAAGGAAGATGAAGATAACCTGGATGCCTTGTTGCTTCGTGGCCGAGCATATTACTACCTTGCTGATCATGATGTTGCATCCAGGCACTACCAGAAAGGCCTTCGTCTAGACCCTGAACATTCAGAACTGAAGAAAGCATATTTTGGGTTGAAAAATCTTGTGAAGAAGACTAAGAGTGCTGAACATAATGCTGCCAAGGGTAAGCTACGTGTGTCTGCTGAGGACTACAAGGCATCCCTAGCAATGGATCCAGATCATACTTCTTACAATGTACATCTTTATCTTGGGCTATGTAACGCTCTGGTTAAACTCGGAAGAGGCA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||