These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12108#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1356 fasta sequence [CCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT-AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACG-CCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAA-CTTGTGATGCACCATTTGCAAATGCTCTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTAC] [+] EMBL AK121932 [CCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACATTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACG CCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAA CTTGTGATGCACCATTTGCAAATGCTCTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTAC] [+] EMBL CB655627 [ CCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCTGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGA ] [+] EMBL CB647216 [ CGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACT ] [+] EMBL CB685787 [ GCCCCTTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACT ] [+] EMBL CF309404 [ GCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCC ] [+] EMBL CA763913 [ TGCTGATGGCAATGCAGCCTCTCTCCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCTGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGNTCTCCACAGGNTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGNTTAGCAAAAACTANGCAACTGGGCGTAGCAATTTTGTCAACTGATGANGGAACTCACGCCCCGACTTTGGGAA TAGTTTGNCTGCAA TTGGAAAGNTGGCACATGAACCTTGNGATGCACCATTTGCAAATGCTC TTTTTTGCTTAC ] consensusID : consensus_12108#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 758 fasta sequence [GCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTACTTGGAGCTCCAAGAACAATTTTGATTTTTAGTTTC] [-] EMBL CB647217 [GCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTACTTGGAGCTCCAAGAACAATTTTGATTTTTAGTTTC] consensusID : consensus_12108#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence [TCTGGGAGTGGATTTCCGTGCTTCGTATGTGTCACTCAGTTTCCTCTATTAAGTTCTCTAGGCATTAGGCATATCTCTGTTTCTTCATCTTCTTGAATGCCTTGTGACATAGCTATGAGATGCTTGTTATAGATCTGAAAACATAGCATAATACCAATGACAATTTCAGAAAAATGTGAGAAACATACAGCTAATTTTTTTTGTGAAGTTCTATCTTACCAAAGGCCTTAGGTCAGGATTAGCAGCTCAGTTTATTTTTGTTTTTAAGTTTCCATTCAGTTTGTCTGATACTGGTGGCCTTTCAACTGCATCTAATTTGCTATATTTCTTTTCAGATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTGGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTCCCTGATCAAAGGCAGTAGTCTCCACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCCCCATTTGCAAATGCTCTTTTTTGCTTACGGAAAACAGGACAACAGGT] [-] EMBL CB661058 [TCTGGGAGTGGATTTCCGTGCTTCGTATGTGTCACTCAGTTTCCTCTATTAAGTTCTCTAGGCATTAGGCATATCTCTGTTTCTTCATCTTCTTGAATGCCTTGTGACATAGCTATGAGATGCTTGTTATAGATCTGAAAACATAGCATAATACCAATGACAATTTCAGAAAAATGTGAGAAACATACAGCTAATTTTTTTTGTGAAGTTCTATCTTACCAAAGGCCTTAGGTCAGGATTAGCAGCTCAGTTTATTTTTGTTTTTAAGTTTCCATTCAGTTTGTCTGATACTGGTGGCCTTTCAACTGCATCTAATTTGCTATATTTCTTTTCAGATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTGGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTCCCTGATCAAAGGCAGTAGTCTCCACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCCCCATTTGCAAATGCTCTTTTTTGCTTACGGAAAACAGGACAACAGGT] consensusID : consensus_12108#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 726 fasta sequence [CATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTTTGCGCCTCCCCAAGACTTTGGGAGTGGATTTCCGTGCTTCATGTTTTTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTTTGCAAGTATCATAAGAAGTGTTTGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTACCTGATCAAAGGCAGTAGTTTACACTACAGATGGGGAAATATCAGACTGCAGACTTTTTTTTATGTTTTCCACAGGAACATTTATCCTAGCATTTTAGCCTCAATGACATGCACATTTATTTTTTAGATACGATACATGATGCTGGATCAGCCTGTCCCTGATTTTGACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGGGTCAGTTTAGCAAAAACTAGGCAACTGGGGGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCT] [-] EMBL CB655628 [CATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTTTGCGCCTCCCCAAGACTTTGGGAGTGGATTTCCGTGCTTCATGTTTTTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTTTGCAAGTATCATAAGAAGTGTTTGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTACCTGATCAAAGGCAGTAGTTTACACTACAGATGGGGAAATATCAGACTGCAGACTTTTTTTTATGTTTTCCACAGGAACATTTATCCTAGCATTTTAGCCTCAATGACATGCACATTTATTTTTTAGATACGATACATGATGCTGGATCAGCCTGTCCCTGATTTTGACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGGGTCAGTTTAGCAAAAACTAGGCAACTGGGGGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCT] consensusID : consensus_12108#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence [AGAACCTTTTTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTCCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTATCCAAGTATCATAAGAAGTGTTTGGCCTGTGGGTCAGAATTCAACGGTGTCATCCCCGCGTTAAATTCTGTCCCTGATCAAAGGCAGTAGTGTACCCTGCAGATGGTGAAATATCAGATCGCAGGCTTGTCTTTATGTTCTCCGCAGGTTCAGCTGATGCAGAATGGCCATGGTGTGCATTCTTGAAGCAGGGTCAGTTTAGCAAAATCTTGGCAGTTGGGC] [-] EMBL CB685788 [AGAACCTTTTTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTCCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTATCCAAGTATCATAAGAAGTGTTTGGCCTGTGGGTCAGAATTCAACGGTGTCATCCCCGCGTTAAATTCTGTCCCTGATCAAAGGCAGTAGTGTACCCTGCAGATGGTGAAATATCAGATCGCAGGCTTGTCTTTATGTTCTCCGCAGGTTCAGCTGATGCAGAATGGCCATGGTGTGCATTCTTGAAGCAGGGTCAGTTTAGCAAAATCTTGGCAGTTGGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12108#0 CCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCG 60 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 CTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCC 120 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 GCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCG 180 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 CCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCG 240 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 ACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACC 300 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 ATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATG 360 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 CTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGG 420 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 ATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCA 480 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 ATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTT 540 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ---------------------------------------------------------TCT 3 consensus_12108#0 TTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATG 600 consensus_12108#1 ------------------------------------------------------------ consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 GGGAGTGGATTTCCGTGCTTCGTATGTGTCACTCAGTTTCCTCTATTAAGTTCTCTAGGC 63 consensus_12108#0 GACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCC 660 consensus_12108#1 -----------------GCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCC 43 consensus_12108#3 ------------------------------------------------------------ consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ATTAGGCATATCTCTGTTTCTTCATCTTCTTGAATGCCTTGTGACATAGCTATGAGATGC 123 consensus_12108#0 CAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATA 720 consensus_12108#1 CAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATA 103 consensus_12108#3 ------------------------------------------------------CATATA 6 consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 TTGTTATAGATCTGAAAACATAGCATAATACCAATGACAATTTCAGAAAAATGTGAGAAA 183 consensus_12108#0 TA-ACAGGTGGAGTTTATT-TGAAACCCCAAGA-ACTAAATGGTCTATTTCAATACCTTG 777 consensus_12108#1 TA-ACAGGTGGAGTTTATT-TGAAACCCCAAGA-ACTAAATGGTCTATTTCAATACCTTG 160 consensus_12108#3 TA-ACAGGTGGAGTTTATT-TGAAACCCCAAGA-ACTAAATGGTCTATTTCAATACCTTG 63 consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 CATACAGCTAATTTTTTTTGTGAAGTTCTATCTTACCAAAGGCCTTAGGTCAGGAT-TAG 242 consensus_12108#0 CTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAA-GACTCTG 836 consensus_12108#1 CTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAA-GACTCTG 219 consensus_12108#3 CTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTTTGCGCCTCCCCAA-GACTTTG 122 consensus_12108#4 -----------------------------AGAACCTTTTTGCGCCTCCCCAA-GACTCTG 30 consensus_12108#2 CAGCTCAGTTTATTTTTGTTTTTAAGTTTCCATTCAGTTTGTCTGATACTGGTGGCCTTT 302 * * * ** * * * * consensus_12108#0 GGAGTGGATTT------CCGTGCTTC-------ATGTTTCTGCCATAAGAAGACTATTGA 883 consensus_12108#1 GGAGTGGATTT------CCGTGCTTC-------ATGTTTCTGCCATAAGAAGACTATTGA 266 consensus_12108#3 GGAGTGGATTT------CCGTGCTTC-------ATGTTTTTGCCATAAGAAGACTATTGA 169 consensus_12108#4 GGAGTGGATTT------CCGTGCTTC-------ATGTTTCTCCCATAAGAAGACTATTGA 77 consensus_12108#2 CAACTGCATCTAATTTGCTATATTTCTTTTCAGATGTTTCTGCCATAAGAAGACTATTGA 362 * ** ** * * * *** ****** * ****************** consensus_12108#0 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTC 943 consensus_12108#1 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTC 326 consensus_12108#3 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTTTGCAAGTATCATAAGAAGTGTTT 229 consensus_12108#4 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTATCCAAGTATCATAAGAAGTGTTT 137 consensus_12108#2 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTG 422 ************************************ * ******************** consensus_12108#0 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAG 1003 consensus_12108#1 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAG 386 consensus_12108#3 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTACCTGATCAAAG 289 consensus_12108#4 GGCCTGTGGGTCAGAATTCAACGGTGTCATCCCCGCGTTAAATTCTGTCCCTGATCAAAG 197 consensus_12108#2 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTCCCTGATCAAAG 482 * ******************** ******* **** ******* *** *********** consensus_12108#0 GCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCC 1063 consensus_12108#1 GCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCC 446 consensus_12108#3 GCAGTAGTTTACACTACAGATGGGGAAATATCAGACTGCAGACTTTTTTTTATGTTTTCC 349 consensus_12108#4 GCAGTAGTGTACCCTGCAGATGGTGAAATATCAGATCGCAGGCTTGTCTTTATGTTCTCC 257 consensus_12108#2 GCAGTAGTCTCCACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCC 542 ******** * * ** ******* *********** **** *** * ******** *** consensus_12108#0 ACAGG------------------------------------------------------- 1068 consensus_12108#1 AC---------------------------------------------------------- 448 consensus_12108#3 ACAGGAACATTTATCCTAGCATTTTAGCCTCAATGACATGCACATTTATTTTTTAGATAC 409 consensus_12108#4 GCAGG------------------------------------------------------- 262 consensus_12108#2 AC---------------------------------------------------------- 544 * consensus_12108#0 -----------------------------------------TTCAACTGATACAGAATGG 1087 consensus_12108#1 -----------------------------------------------------AGAATGG 455 consensus_12108#3 GATACATGATGCTGGATCAGCCTGTCCCTGATTTTGACAGGTTCAACTGATACAGAATGG 469 consensus_12108#4 -----------------------------------------TTCAGCTGATGCAGAATGG 281 consensus_12108#2 -----------------------------------------------------AGAATGG 551 ******* consensus_12108#0 GCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGC 1147 consensus_12108#1 GCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGC 515 consensus_12108#3 GCATTGTGTGCATACTTGAAGCAGGGTCAGTTTAGCAAAAACTAGGCAACTGGGGGTAGC 529 consensus_12108#4 CCATGGTGTGCATTCTTGAAGCAGGGTCAGTTTAGCAAAATCTTGGCAGTTGGGC----- 336 consensus_12108#2 GCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGC 611 *** ******** ********** *************** ** **** **** consensus_12108#0 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 1207 consensus_12108#1 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 575 consensus_12108#3 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 589 consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 671 consensus_12108#0 TGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTTTGCTTACC 1267 consensus_12108#1 TGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTT-GCTTACC 634 consensus_12108#3 TGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTTTTTTTT-GCTTACC 648 consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 TGTAAAGTTGGCACATGAACTTGTGATGCCCCATTTGCAAATGCTCTTTTTT-GCTTACG 730 consensus_12108#0 GAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACA 1327 consensus_12108#1 GAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACA 694 consensus_12108#3 GAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACA 708 consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 GAAAACAGGACAACAGGT------------------------------------------ 748 consensus_12108#0 CAGGTTGCGCTAATGTCTTGATATATTAC------------------------------- 1356 consensus_12108#1 CAGGTTGCGCTAATGTCTTGATATATTACTTGGAGCTCCAAGAACAATTTTGATTTTTAG 754 consensus_12108#3 CAGGTTGCGCTAATGTCT------------------------------------------ 726 consensus_12108#4 ------------------------------------------------------------ consensus_12108#2 ------------------------------------------------------------ consensus_12108#0 ---- consensus_12108#1 TTTC 758 consensus_12108#3 ---- consensus_12108#4 ---- consensus_12108#2 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||