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Oryza sativa
cluster # 1211 cluster # 1211       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1211#0 length = 2681 sequences # 2  

consensusID : consensus_1211#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2681
fasta sequence
                              [GGCCTCGTGCCGTTCTGTTGACATGGAGTCTCTGGATATTTCTGGAGAAAAAGATCAGTGTGGGTATGGAGAGAATTTAGTCAAATCAGATAAGCTTGCTACTCAAGGCAAGATTGTTAATGACCCTGTTGATCATTTTATCTCAAGCAATATGCTATCAGAGGGTCCTAATGTAATAGAAAACCCATGTGGTGATGGGAGGCGGAAGAAGAAGAAGAAGACAAAACATCACTCAGAGTCGTCAAAGGATGTTGGTCCTACTCATGATGTGACAAAATCATTGATTACAAATGAAATCTCAATACAAAACACAAATGTTTCTCCCTTAGATCCAAAGCAAATAACACCGGCCACAACAGGAGTAGGAACAATTGGTCACCAAACAAAGTTTGACGTAAGCCTGGATGTAGCAGCAGCAAAAGTTATTGATGAGGTATTGGCAGATTTAAGATGCACTGATAACACAAGTAAGGATTTGGATCAATGTCAGTTATCAAAACAGAAACACCAGGGCAGCGATGTACTTGGAGTGCATGGAAACACTGTGGATAAAGGTGCCCTTAGTGCAGTGTTACCTCTGAAATATCCAGCGGCAATTCACTCTGATGCTCCCATCAGCTCACCTAGTCATAATAAGGCTAGAGGAGAAAAATTGGAAGTACTGCCAACTGCACATGACTCGTCTCATTTTTCAGGTGGTGTACCTGATGAAAATGCAAATGCAGAACTAAGAGAATCTGTTTCTTTGAGGCCTTCTGACAACACAAGTGTTTCTAATAATATTTCAACTGAAAATGTTGTAGTGCAAGATGATGACAAAAACAAAGCCACTAAACGTCAGAGAAAGAAGATTTCCCTAAAGCATGTCCCTACAGATAATGATAAAACTATTCAGTCTTTGGATGAGCAAGTTAACCAGGTTGCTATTGAGGACTTAAACGGATCAAATGCTACCAAAGCAGATTTAGTTCAAGGAGGGTCTGTAATTGATGGTCCTGCAGGTACTGTTGAAAATGTACAGAAGAAAAGCAGGTCTACCAAGATTCGTACACCTAAAGTCCAAAAGGCTTACCCTTCTGCACATTTTGAAGATAGTAAATCCGCCAAGGACAGCCAGGGCAAATGTGTAAGTTACATTGGTGAGAGTGGGACCCATAGTAATGACACTGCAGTAGGAGCTCCAACACAATCGTTTGCAGTTCAGGAAGATGCCACAGCTCTCAGAACTTTAACCCCTAGTGCTCTAAAGGGAAGGAAGAAATCTTCCAAGACTGGACTTCAGAGTCAGAATGCCTCTTTGGATCATGGTTCTGATGTAGATTTGATGAACTACAAGGCTGAACATATTACAGCTAGTCCTAAAAAATCTGCTGTTGCTGTTGAACCAAATGAAAAAATCAACTTCCTCGACCATTTTAGCCCCAAAGGGACTAATGATCAATATGTTTCTGCAGAAAACAAAGAAAACGGCAGAGAGGAAACTGTAAGAGAAGTTGAGGATGAAAGTAACAAAAGAGAAGTGGATCTGCAGTCTCAGCTCGCTGATAATGCCAAACCAAATGATCTGCTACAATCGCATCATATAGAAAAAACTACATCAACTAATAATTCACCTGGTGATGTTGGTGTGCCATCTGATTCAACACAAAATGTGGACATAGCAGATGGAAATGTGAAGAAAGGTAAGCAGAAGAAGCGAAAAAAGAAATCAGATTTGCTCAATTCAGTTCCCCAGAAGGTGGATCCTAACAGTGATCATCGAGACATTGACAATGGTGTACAAGATTTTTCGTTTTCTGTTGCACAGGAAGGAAGAATGGAGCATGACAGGAAAGAGAATAACAATAATGTAATTTGGAACAGTAGTATGCTGACACAGGACCCAAAAGATGCCACATGTGATAGCAGAGTAAAGAAGCTCAACCAAAGCAAGAGTGGTTCTGATAACCAGGGTAATTTGCCAATTGATAAGGATCATGCGCTTATGGACAAAGGACAAAGAAAGTCCAGTTCTCAGACAAAGCCCCATGCTGAGAGTAAAAATTTTGACAGGTTTAGCAATGGAAAGGCAGATCCAAATTCTAAGTCTATAAGAAATCTTGTTAAGAGCTTTTCCATGAGCCCACCAGCATCAAGTGACAGCACACAGGGCACACCACAAAATAGTCGATTTCGACTAGCAGCTCGGAAAGTTCCAAGAAAAAGGTATGAGCAAACCAGTGGCAAATCCAAAAAAGACAAAGGAACTGGTACAATTTTCAATGATGCCAGCAGTGATGGCTCTGATGATGAATTGGGCATCGGAAGTGAAAAGGCTGCCATTGAAACTTCTTCAGATGATGCATCCTCATCAGCTGACTCAGGTATTTCATCTGCAGCCCATGATAGTGGCGAGCCTGATGACGATGGCAATGCATCACTATCACAGAAATCTCGCAAAGGGGGGCTTGGCTCCATCCTCAGAGGCTCTTGTAGTTACAAGAAGGCAAAGCAGAAACAAGCCGTGCAATTGGATGACACCGAGGTTCCTGATAGCCAGCCAATGGACATTTTCTGAGACTGAACTTGATACTTGAAAGAAGAAACACGGACAGCTTTGGTTTTCCATTATTTTCATCCACCTGATTGCATGCCCTGGAGTTTGAGCATTGCATATTAGTATCCCAACCAGCCTTGATACC]

[+] EMBL CF307228             [GGCCTCGTGCCGTTCTGTTGACATGGAGTCTCTGGATATTTCTGGAGAAAAAGATCAGTGTGGGTATGGAGAGAATTTAGTCAAATCAGATAAGCTTGCTACTCAAGGCAAGATTGTTAATGACCCTGTTGATCATTTTATCTCAAGCAATATGCTATCAGAGGGTCCTAATGTAATAGAAAACCCATGTGGTGATGGGAGGCGGAAGAAGAAGAAGAAGACAAAACATCACTCAGAGTCGTCAAAGGATGTTGGTCCTACTCATGATGTGACAAAATCATTGATTACAAATGAAATCTCAATACAAAACACAAATGTTTCTCCCTTAGATCCAAAGCAAATAACACCGGCCACAACAGGAGTAGGAACAATTGGTCACCAAACAAAGTTTGACGTAAGCCTGGATGTAGCAGCAGCAAAAGTTATTGATGAGGTATTGGCAGATTTAAGATGCACTGATAACACAAGTAAGGATTTGGATCAATGTCAGTTATCAAAACAGAAACACCAGGGCAGCGATGTACTTGGAGTGCATGGAAACACTGTGGATAAAGGTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK063531             [                                                                                               TTGCTACTCAAGGCAAGATTGTTAATGACCCTGTTGATCAACATATCTCAAGCAATATGCTATCAGAGGGTCCTAATGTAATAGAAAACCCATGTGGTGATGGGAGGCG   GAAGAAGAAGAAGACAAAACATCACTCAGAGTCGTCAAAGGATGTTGGTCCTACTCATGATGTGACAAAATCATTGATTACAAATGAAATCTCAATACAAAACACAAATGTTTCTCCCTTAGATCCAAAGCAAATAACACCGGCCACAACAGGAGTAGGAACAATTGGTCACCAAACAAAGTTTGACGTAAGCCTGGATGTAGCAGCAGCAAAAGTTATTGATGAGGTATTGGCAGATTTAAGATGCACTGATAACACAAGTAAGGATTTGGATCAATGTCAGTTATCAAAACAGAAACACCAGGGCAGCGATGTACTTGGAGTGCATGGAAACACTGTGGATAAAGGTGCCCTTAGTGCAGTGTTACCTCTGAAATATCCAGCGGCAATTCACTCTGATGCTCCCATCAGCTCACCTAGTCATAATAAGGCTAGAGGAGAAAAATTGGAAGTACTGCCAACTGCACATGACTCGTCTCATTTTTCAGGTGGTGTACCTGATGAAAATGCAAATGCAGAACTAAGAGAATCTGTTTCTTTGAGGCCTTCTGACAACACAAGTGTTTCTAATAATATTTCAACTGAAAATGTTGTAGTGCAAGATGATGACAAAAACAAAGCCACTAAACGTCAGAGAAAGAAGATTTCCCTAAAGCATGTCCCTACAGATAATGATAAAACTATTCAGTCTTTGGATGAGCAAGTTAACCAGGTTGCTATTGAGGACTTAAACGGATCAAATGCTACCAAAGCAGATTTAGTTCAAGGAGGGTCTGTAATTGATGGTCCTGCAGGTACTGTTGAAAATGTACAGAAGAAAAGCAGGTCTACCAAGATTCGTACACCTAAAGTCCAAAAGGCTTACCCTTCTGCACATTTTGAAGATAGTAAATCCGCCAAGGACAGCCAGGGCAAATGTGTAAGTTACATTGGTGAGAGTGGGACCCATAGTAATGACACTGCAGTAGGAGCTCCAACACAATCGTTTGCAGTTCAGGAAGATGCCACAGCTCTCAGAACTTTAACCCCTAGTGCTCTAAAGGGAAGGAAGAAATCTTCCAAGACTGGACTTCAGAGTCAGAATGCCTCTTTGGATCATGGTTCTGATGTAGATTTGATGAACTACAAGGCTGAACATATTACAGCTAGTCCTAAAAAATCTGCTGTTGCTGTTGAACCAAATGAAAAAATCAACTTCCTCGACCATTTTAGCCCCAAAGGGACTAATGATCAATATGTTTCTGCAGAAAACAAAGAAAACGGCAGAGAGGAAACTGTAAGAGAAGTTGAGGATGAAAGTAACAAAAGAGAAGTGGATCTGCAGTCTCAGCTCGCTGATAATGCCAAACCAAATGATCTGCTACAATCGCATCATATAGAAAAAACTACATCAACTAATAATTCACCTGGTGATGTTGGTGTGCCATCTGATTCAACACAAAATGTGGACATAGCAGATGGAAATGTGAAGAAAGGTAAGCAGAAGAAGCGAAAAAAGAAATCAGATTTGCTCAATTCAGTTCCCCAGAAGGTGGATCCTAACAGTGATCATCGAGACATTGACAATGGTGTACAAGATTTTTCGTTTTCTGTTGCACAGGAAGGAAGAATGGAGCATGACAGGAAAGAGAATAACAATAATGTAATTTGGAACAGTAGTATGCTGACACAGGACCCAAAAGATGCCACATGTGATAGCAGAGTAAAGAAGCTCAACCAAAGCAAGAGTGGTTCTGATAACCAGGGTAATTTGCCAATTGATAAGGATCATGCGCTTATGGACAAAGGACAAAGAAAGTCCAGTTCTCAGACAAAGCCCCATGCTGAGAGTAAAAATTTTGACAGGTTTAGCAATGGAAAGGCAGATCCAAATTCTAAGTCTATAAGAAATCTTGTTAAGAGCTTTTCCATGAGCCCACCAGCATCAAGTGACAGCACACAGGGCACACCACAAAATAGTCGATTTCGACTAGCAGCTCGGAAAGTTCCAAGAAAAAGGTATGAGCAAACCAGTGGCAAATCCAAAAAAGACAAAGGAACTGGTACAATTTTCAATGATGCCAGCAGTGATGGCTCTGATGATGAATTGGGCATCGGAAGTGAAAAGGCTGCCATTGAAACTTCTTCAGATGATGCATCCTCATCAGCTGACTCAGGTATTTCATCTGCAGCCCATGATAGTGGCGAGCCTGATGACGATGGCAATGCATCACTATCACAGAAATCTCGCAAAGGGGGGCTTGGCTCCATCCTCAGAGGCTCTTGTAGTTACAAGAAGGCAAAGCAGAAACAAGCCGTGCAATTGGATGACACCGAGGTTCCTGATAGCCAGCCAATGGACATTTTCTGAGACTGAACTTGATACTTGAAAGAAGAAACACGGACAGCTTTGGTTTTCCATTATTTTCATCCACCTGATTGCATGCCCTGGAGTTTGAGCATTGCATATTAGTATCCCAACCAGCCTTGATACC]


>consensus_1211#0 GGCCTCGTGCCGTTCTGTTGACATGGAGTCTCTGGATATTTCTGGAGAAAAAGATCAGTG TGGGTATGGAGAGAATTTAGTCAAATCAGATAAGCTTGCTACTCAAGGCAAGATTGTTAA TGACCCTGTTGATCATTTTATCTCAAGCAATATGCTATCAGAGGGTCCTAATGTAATAGA AAACCCATGTGGTGATGGGAGGCGGAAGAAGAAGAAGAAGACAAAACATCACTCAGAGTC GTCAAAGGATGTTGGTCCTACTCATGATGTGACAAAATCATTGATTACAAATGAAATCTC AATACAAAACACAAATGTTTCTCCCTTAGATCCAAAGCAAATAACACCGGCCACAACAGG AGTAGGAACAATTGGTCACCAAACAAAGTTTGACGTAAGCCTGGATGTAGCAGCAGCAAA AGTTATTGATGAGGTATTGGCAGATTTAAGATGCACTGATAACACAAGTAAGGATTTGGA TCAATGTCAGTTATCAAAACAGAAACACCAGGGCAGCGATGTACTTGGAGTGCATGGAAA CACTGTGGATAAAGGTGCCCTTAGTGCAGTGTTACCTCTGAAATATCCAGCGGCAATTCA CTCTGATGCTCCCATCAGCTCACCTAGTCATAATAAGGCTAGAGGAGAAAAATTGGAAGT ACTGCCAACTGCACATGACTCGTCTCATTTTTCAGGTGGTGTACCTGATGAAAATGCAAA TGCAGAACTAAGAGAATCTGTTTCTTTGAGGCCTTCTGACAACACAAGTGTTTCTAATAA TATTTCAACTGAAAATGTTGTAGTGCAAGATGATGACAAAAACAAAGCCACTAAACGTCA GAGAAAGAAGATTTCCCTAAAGCATGTCCCTACAGATAATGATAAAACTATTCAGTCTTT GGATGAGCAAGTTAACCAGGTTGCTATTGAGGACTTAAACGGATCAAATGCTACCAAAGC AGATTTAGTTCAAGGAGGGTCTGTAATTGATGGTCCTGCAGGTACTGTTGAAAATGTACA GAAGAAAAGCAGGTCTACCAAGATTCGTACACCTAAAGTCCAAAAGGCTTACCCTTCTGC ACATTTTGAAGATAGTAAATCCGCCAAGGACAGCCAGGGCAAATGTGTAAGTTACATTGG TGAGAGTGGGACCCATAGTAATGACACTGCAGTAGGAGCTCCAACACAATCGTTTGCAGT TCAGGAAGATGCCACAGCTCTCAGAACTTTAACCCCTAGTGCTCTAAAGGGAAGGAAGAA ATCTTCCAAGACTGGACTTCAGAGTCAGAATGCCTCTTTGGATCATGGTTCTGATGTAGA TTTGATGAACTACAAGGCTGAACATATTACAGCTAGTCCTAAAAAATCTGCTGTTGCTGT TGAACCAAATGAAAAAATCAACTTCCTCGACCATTTTAGCCCCAAAGGGACTAATGATCA ATATGTTTCTGCAGAAAACAAAGAAAACGGCAGAGAGGAAACTGTAAGAGAAGTTGAGGA TGAAAGTAACAAAAGAGAAGTGGATCTGCAGTCTCAGCTCGCTGATAATGCCAAACCAAA TGATCTGCTACAATCGCATCATATAGAAAAAACTACATCAACTAATAATTCACCTGGTGA TGTTGGTGTGCCATCTGATTCAACACAAAATGTGGACATAGCAGATGGAAATGTGAAGAA AGGTAAGCAGAAGAAGCGAAAAAAGAAATCAGATTTGCTCAATTCAGTTCCCCAGAAGGT GGATCCTAACAGTGATCATCGAGACATTGACAATGGTGTACAAGATTTTTCGTTTTCTGT TGCACAGGAAGGAAGAATGGAGCATGACAGGAAAGAGAATAACAATAATGTAATTTGGAA CAGTAGTATGCTGACACAGGACCCAAAAGATGCCACATGTGATAGCAGAGTAAAGAAGCT CAACCAAAGCAAGAGTGGTTCTGATAACCAGGGTAATTTGCCAATTGATAAGGATCATGC GCTTATGGACAAAGGACAAAGAAAGTCCAGTTCTCAGACAAAGCCCCATGCTGAGAGTAA AAATTTTGACAGGTTTAGCAATGGAAAGGCAGATCCAAATTCTAAGTCTATAAGAAATCT TGTTAAGAGCTTTTCCATGAGCCCACCAGCATCAAGTGACAGCACACAGGGCACACCACA AAATAGTCGATTTCGACTAGCAGCTCGGAAAGTTCCAAGAAAAAGGTATGAGCAAACCAG TGGCAAATCCAAAAAAGACAAAGGAACTGGTACAATTTTCAATGATGCCAGCAGTGATGG CTCTGATGATGAATTGGGCATCGGAAGTGAAAAGGCTGCCATTGAAACTTCTTCAGATGA TGCATCCTCATCAGCTGACTCAGGTATTTCATCTGCAGCCCATGATAGTGGCGAGCCTGA TGACGATGGCAATGCATCACTATCACAGAAATCTCGCAAAGGGGGGCTTGGCTCCATCCT CAGAGGCTCTTGTAGTTACAAGAAGGCAAAGCAGAAACAAGCCGTGCAATTGGATGACAC CGAGGTTCCTGATAGCCAGCCAATGGACATTTTCTGAGACTGAACTTGATACTTGAAAGA AGAAACACGGACAGCTTTGGTTTTCCATTATTTTCATCCACCTGATTGCATGCCCTGGAG TTTGAGCATTGCATATTAGTATCCCAACCAGCCTTGATACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)