These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12110#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2263 fasta sequence [CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGGTCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACACCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCTCCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCCGCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGCCACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTGGGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCTGGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCTTCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGGGGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTGATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGATGTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGAATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGGATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGGCATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAAATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAGCTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAGTTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGATCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGTCAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTGACAGGGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTGACAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTGTAAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACCACCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGTATTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACTGCACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGCTTCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATAAACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTTGTCTACCGTGCTTCAGAGTGCAGCAACACTCATGCATCCACTACCAACAGTTCATTTGGTGTCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGTTCAGCACCCAGGGTCCTCTGCCAAGTTTTGCAGTTCTCTCTGGCGTCCATTGTCTAGTTGTGTGCCTGTTGAGAAGGCTGCGTGGCAAAGATGACATTGTTAATGCTGGAATAGCTGGTTGTTGCACTAGCCTTGCTCTGAGCTTTCCAGATGCAGCTCATGTTGATTGGCTTTTGCTTGACGAGGTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATCTGCATAGCATTTTAATGTCTCACTGCAACACGTTGTCTGGATATTCGTAAAATAACATAGC] [+] EMBL AK069314 [CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGGTCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACACCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCTCCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCCGCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGCCACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTGGGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCTGGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCTTCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGGGGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTGATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGATGTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGAATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGGATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGGCATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAAATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAGCTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAGTTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGATCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGTCAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTGACAGGGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTGACAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTGTAAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACCACCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGTATTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACTGCACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGCTTCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATAAACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTTGTCTACCGTGCTTCAGAGTGCAGCAACACTCATGCATCCACTACCAACAGTTCATTTGGTGTCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGTTCAGCACCCAGGGTCCTCTGCCAAGTTTTGCAGTTCTCTCTGGCGTCCATTGTCTAGTTGTGTGCCTGTTGAGAAGGCTGCGTGGCAAAGATGACATTGTTAATGCTGGAATAGCTGGTTGTTGCACTAGCCTTGCTCTGAGCTTTCCAGATGCAGCTCATGTTGATTGGCTTTTGCTTGACGAGGTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATCTGCATAGCATTTTAATGTCTCACTGCAACACGTTGTCTGGATATTCGTAAAATAACATAGC] consensusID : consensus_12110#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1486 fasta sequence [GTAATCTACGGGATTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCCCTCAAGCTGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCTCTCGGCGGCGGTGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCTGGTGCTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTCGACGCTGTTCCGTCCGCTCGCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTATGGAAGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCTTGCCCATCATACGGGCTTCCGAGTTGGCCCTCCTCCGTGGATTTCATGCCTCTCGGCAGCGGCAGCGGCAGCGGCAGAGGCGGCGAAAAGAACGACGTGGTCGCCGTCGACTACAGCGGCAGCGGGGTGCTGTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCAAGGCCTTCCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCCGGCCTCCTCCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAAACCACCCCTTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCTTCACCGCCGATGATGCCCTTGATAGCATCCGCAACTTTTTCCAAGATGATGATGACTTCCTCACCGCCTACACGGCCGTCGGCGGCTCATGCATCTGGATGACAGTGCAGAGCACCGTCGCCGCCGCCGCGGGGACTTACTCCTTTGACACGTCCACCGCCACATGGACCAAGCTCGGCGACTGGTTGCTTCCGTTCAGAGGCCGCGCCGAGTATGCGCCCGAGCACAAGCTCTGGTTCGCGCTCTCCTCCGACGGCAACGAGCTGTGCGCGTCCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGTGAGCCCCGTGTCGCCCAGCGGCTCACCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGGCAGGTTCTGCATTGTCAGATTCATGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGAGAAATTCGCGGTGTTCACCGGCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCACAACGCTCCAGATGGTTAATCATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGACTCTCGTGTGTTTTAAATAGAAATTTATGAATAAAAACACTTCTCA] [+] EMBL AK121937 [GTAATCTACGGGATTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCCCTCAAGCTGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCTCTCGGCGGCGGTGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCTGGTGCTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTCGACGCTGTTCCGTCCGCTCGCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTATGGAAGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCTTGCCCATCATACGGGCTTCCGAGTTGGCCCTCCTCCGTGGATTTCATGCCTCTCGGCAGCGGCAGCGGCAGCGGCAGAGGCGGCGAAAAGAACGACGTGGTCGCCGTCGACTACAGCGGCAGCGGGGTGCTGTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCAAGGCCTTCCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCCGGCCTCCTCCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAAACCACCCCTTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCTTCACCGCCGATGATGCCCTTGATAGCATCCGCAACTTTTTCCAAGATGATGATGACTTCCTCACCGCCTACACGGCCGTCGGCGGCTCATGCATCTGGATGACAGTGCAGAGCACCGTCGCCGCCGCCGCGGGGACTTACTCCTTTGACACGTCCACCGCCACATGGACCAAGCTCGGCGACTGGTTGCTTCCGTTCAGAGGCCGCGCCGAGTATGCGCCCGAGCACAAGCTCTGGTTCGCGCTCTCCTCCGACGGCAACGAGCTGTGCGCGTCCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGTGAGCCCCGTGTCGCCCAGCGGCTCACCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGGCAGGTTCTGCATTGTCAGATTCATGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGAGAAATTCGCGGTGTTCACCGGCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCACAACGCTCCAGATGGTTAATCATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGACTCTCGTGTGTTTTAAATAGAAATTTATGAATAAAAACACTTCTCA] consensusID : consensus_12110#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 613 fasta sequence [CGGCTTGTTGAGAA-GCTGCGCGGCAAAGATG-ACATTGTTAATGCTGGGATAGCTGGTTGTT-GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG-CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT-GAATTTT-GTTTTGGGACAT-GTCTCATAT-CTAGATTTG-CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT-GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAAAAAAAAAAAACTGTGGCACCTGTTCTGTAATCTTTCCATCTTGCTATCCATATCTGGGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCATATTTATCAAAAA] [+] EMBL AU055703 [CGGCTTGTTGAGAA GNTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGCCAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCNGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTNGATTTCATTGGTTTGGCNGATAAAATTTAAGAAAAAAAAAAAA ] [+] EMBL AU056198 [ GAA GCTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAAAAAAAAAAAA ] [+] EMBL AU056197 [ GAAGGCTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATA ] [+] EMBL AU055702 [ GAAGGCTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGTGGAATTTTGGTTTTGGGACATGGCCNCATATCCAAGATTTGCCTTTCTGGATGACGCCAGGTTTTCCTTGCTGGACTGTNGGCAA ] [+] EMBL BI796173 [ GCTGCGCGGC AAGATGCACA TGGTAATGCT GGATA CT GTTGTTCGCACT GCCTTGCTTTGAGCTTTCCAGGAACACCACAA CCTTGCTCCAAAGCTGTGCAACCTTT CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGTCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAAAAATTCGTCTCTGTGGCACCTGTTCTGTAATCTTTCCATCTTGCTATCCATATCTGGGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCATATTTATCAAAAA] consensusID : consensus_12110#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 579 fasta sequence [AGAGAAAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAG-TCGGACGGCGACGAGCTCGGCGGCGGCGGCGCCAGN-GNG-AACCAGCCCCAACGACGGGGGCGCGTCTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCA-GGTCTTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTGTTAATGCTNGGATAGCTGGTTGTTGCACTTGCCTTGCTTTTAG-TTTCCAGGGACACCANAAGCCTTGCTCCAAAGCTGTGCAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCAGAGTGGKGGCGTTCTCCCMCCATTCACTCTGCCACCACT] [+] EMBL C27105 [AGAGAAAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAGNTCGGACGGCGACGAGCTCGGCGGCGGCGGCGCCAGN GNGNAACCAGCCCCAACGACGGGGGCGCGTCTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGG GCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCA GGTCTTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTGTTAATGCTNGGATAGCTGGTTGTTGCACTTGCCTTGCTTTTAG TTTCCAGGGACACCANAAGCCTTG ] [+] EMBL OSS1549A [ AAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAG TCGGACGGCGACGAGNTCGGCGGCGGCGGCGCCCNNGGNG AACCAGCCCCAACGACGGGGGCGCGTNTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGTTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCAGGGTCTTCT ] [+] EMBL BE229568 [ cGAGCAGCGTBGGCGGCGAAACGCGGGASCAG TCGGACGGCGACGAVMTCGGCGGCGGC GC CCAG GNG AACCAGCCCCAACGACGGGGGCGCGTCT CGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCA GGTCCTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTGCGCGGCAAAGATGACATTGTTAATGCTGGGATAGCTGGTTGTTGCACTGGCCTTGCTTTGAGCTTTCCAGGRACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCAGAGTGGKGGCGTTCTCCCMCCATTCACTCTGCCACCACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGC 60 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 GGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCA 120 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGG 180 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 TCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCC 240 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 TCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACA 300 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCT 360 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCC 420 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 GCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGC 480 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTG 540 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 GGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCT 600 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 GGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCT 660 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 TCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGG 720 consensus_12110#1 ------------------------------------------------------------ consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 GGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTG 780 consensus_12110#1 -----------------------------------------------GTAATCTACGGGA 13 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGAT 840 consensus_12110#1 TTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGC 73 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 GTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGA 900 consensus_12110#1 GAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACT--CGTCTCCGCCG 131 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGG 960 consensus_12110#1 CGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCCCTCAAGC 191 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGG 1020 consensus_12110#1 TGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTC 251 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAA 1080 consensus_12110#1 CGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCTCTCGGCGGCGG 311 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAG 1140 consensus_12110#1 TGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCTG-------GTG 364 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAG 1200 consensus_12110#1 CTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTCGACG 424 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 TTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGA 1260 consensus_12110#1 CTGTTCCGTCCGCTC-GCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTATGGA 483 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 TCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGT 1320 consensus_12110#1 --AGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCT---TGCCCATCA 538 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 CAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTG 1380 consensus_12110#1 TACGGGCTTCCGAGTTGGCCCTCCT--CCGTGGATTTCATGCCTCTCGGCAGCGGCAGCG 596 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ACAG-GGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTG 1439 consensus_12110#1 GCAGCGGCAGAGGCGGCGAAAAGAAC--GACGTGGTCGCCGTCGA-CTACAGCGGCAGCG 653 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ACAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTG 1499 consensus_12110#1 GGGTGCTGTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCA 713 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 TAAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACC 1559 consensus_12110#1 -AGGCCTTCCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCC 772 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ACCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGT 1619 consensus_12110#1 GGCCTCCTCCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAA 832 consensus_12110#2 ------------------------------------------------------------ consensus_12110#3 ------------------------------------------------------------ consensus_12110#0 ATTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACT 1679 consensus_12110#1 ACCACCCCTTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCT 892 consensus_12110#2 --------CGGCTTGTTGAGAAGCTGCGC-----GGCAAAGATGACATTGTT---AATGC 44 consensus_12110#3 ------AGAGAAAGAGGGGGGGGTTGTGTTGTG-AGCAGCGATGGCGGCGA----AACGC 49 consensus_12110#0 GCACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGC 1739 consensus_12110#1 TCACC------GCCGATGATGCCCTTGAT-----AGCATCCGCAACTTTTTC---CAAGA 938 * * * consensus_12110#2 TGGGAT--AGCTGGTTGTTGC-ACTGGCCTTGCTTTGAGCTTTC------CAGGAACACC 95 consensus_12110#3 GGGAGC--AGTCGGACGGCG--ACGAGCTCGGCGGCGGCGGCGC------CAGNGNGA-- 97 consensus_12110#0 TTCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATA 1799 consensus_12110#1 TGATGATGACTTCCTCACCGC--CTACACGGCCGTCGGCGGCTCATGCATCTGGATGACA 996 * * * * * * consensus_12110#2 -ACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGCAGCATTCTCATGCATCATGGAGGG-- 152 consensus_12110#3 -ACCAGCC-----CCAACGACGGGGGCGCGTCTCCGCCTCCCC-----TCGCCGCCGC-- 144 consensus_12110#0 AACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTT 1859 consensus_12110#1 GTGCAGAG------CACCGTCGCCGCCGCCGCGGGGACTTACTCCT--TTGACACGTC-- 1046 * * * * consensus_12110#2 GCTCAACAAACAGCA-GGCTGCAATGGCAC-----AGACACTTGGTGGGAGTGCTTTGAC 206 consensus_12110#3 GCCCGCCGTATGCTTCATCCGCTCCGCCGG-----AGAC-TTCGCCGGTGGCGCCTTCAT 198 consensus_12110#0 GTCTACCGTGCTTCA-GAGTGCAGCAACACT---CATGCATCCACTACCAACAGTTCATT 1915 consensus_12110#1 CACCGCCACATGGACCAAGCTCGGCGACTGGTTGCTTCCGTTCAGAGGCCGCGCCGAGTA 1106 * * * * consensus_12110#2 CG---TTTCACACCAGA-ATGG-TGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTT 261 consensus_12110#3 CGG-ATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCAT 257 consensus_12110#0 TGGTGTCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGT 1975 consensus_12110#1 TGCGCCCGAGCACAAGCTCTGGTTCGCGCTC-TCCTCCGACGGCAACGAGCTGTGCGCGT 1165 * * * *** * * * * * consensus_12110#2 GATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAG 321 consensus_12110#3 TCAGCACCGCAGGTCTTCTGCCAAGACTTTT-GCAGTTCTCTCTGGCGTCCAGAGTCTGG 316 consensus_12110#0 TCAGCACCCAGGGTCCTCTGCCAAGTTTT---GCAGTTCTCTCTGGCGTCCATTGTCTAG 2032 consensus_12110#1 CCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGTGAGCCCCGTGTCGCCCAGCGGCTCA 1225 * * * * * * * * ** consensus_12110#2 ACTCTTCAGCATAGGGAGAAGGAGATGCT-CAAGAAAGCTATAGCTTAGTGAATTTTGTT 380 consensus_12110#3 --TTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTG-TTAATGC-TNGGATA 372 consensus_12110#0 --TTGTGTGCCTGTTGAGAAGGCTGCGTGGCAAAGATGACATTG-TTAATGC-TGGAATA 2088 consensus_12110#1 -CCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGGCAG-GTTCTGCATTGTCAGATTCA 1283 * * * * ** consensus_12110#2 TTGGGACATGTCTCATATCTAGATTTGCTTTCTGTATGACGCCAGGT-TTTTCTTGCTGC 439 consensus_12110#3 GCTGGTTGTTGCACTTGCCTTGCTTTTAGTTTCCAGGGACACCANAAGCCTTGCTCCAAA 432 consensus_12110#0 GCTGGTTGTTGCACTAGCCTTGCTCTGAGCTTTCCA-GATGCAGC---TCATGTTGATTG 2144 consensus_12110#1 TGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGAGAAATTCG---CGGTGTTCACCG 1340 * * * * ** * * consensus_12110#2 ACTGTGGCAAGCGCTG--GCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAA 497 consensus_12110#3 GCTGTG-CAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAACAAACAGCAGGC 491 consensus_12110#0 GCTTTTGC--TTGACGAGGTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATC 2202 consensus_12110#1 GCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCACAACGCTCCAGATGGTTAATC 1400 * * * * * * consensus_12110#2 AAAAAA---AAAACTGTGGCACCTGTTCTGTAAT-CTTTCCATCTTGCTATCCATATCTG 553 consensus_12110#3 TGCAAT---GGCACAG--ACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCAGAGTGG 546 consensus_12110#0 TGCA-T---AGCATTTTAATGTCT-CACTGCAACACGTTGTCTGGATATTCGTAAAATAA 2257 consensus_12110#1 ATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGACTCTCGTGTGTTTTAAATAG 1460 * * consensus_12110#2 GGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCATATTTATCAAAAA 613 consensus_12110#3 KGGCGTTCTCC--CMCCATTCACT--CTGCCACCACT----------------------- 579 consensus_12110#0 CATAGC------------------------------------------------------ 2263 consensus_12110#1 AAATTTATGAATAAAAACACTTCTCA---------------------------------- 1486 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||