These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12130#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 781 fasta sequence [CAAAATAATCTCTGTGTTTCTGGCTCATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT-CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG-CCCAGGATTTCAGCCAATCTCGGTGGAG-ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT-CCGGTGAACCT--CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAAAAAGCAAGTTGCAG] [+] EMBL CF279690 [CAAAATAATCTCTGTGTTTCTGGCTCATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT CCCCCCGTCCATGTCGCATCATCATCAGTTCA ] [+] EMBL C73942 [ TCATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGNCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCA GCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGNCGNTG CCTACATCATCATCTTTGGCATGTCGACGGCCTTCGTCATCCTGGC ] [+] EMBL C99719 [ CATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCTCCCCTCNTCGCCNTCGTTGGCGCCGCCGCTTTCGCCGTTCACCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGC ATCGCGTCATCACCGTCAGGCGGCCCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACG CCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGTNCCGGTGAACCT CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAaaaaaa ] [+] EMBL AK065923 [ GTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCAT ] [+] EMBL CF292312 [ TGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAGAATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACA ] [+] EMBL CA752968 [ GCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCAC ] [-] EMBL CF279689 [ CCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGAAGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGNTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCTCCCCCCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAAAAA ] [-] EMBL CF292313 [ AGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTC ATTAACATCCTTCCTGCTTCTGATCCAAaaaaa ] [+] EMBL CA764705 [ GGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAGCAAGTACCTTTTTTCCCAGTACTGTAAATCTGTGAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAACGTGCAAGTTGCAG] [-] EMBL CF589245 [ agCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||