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Oryza sativa
cluster # 12144 cluster # 12144       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12144#0 length = 1343 sequences # 8  
consensus_12144#1 length = 1163 sequences # 2  

consensusID : consensus_12144#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1343
fasta sequence
                              [AGCACAATCGTGCGAGGCTCGCCTAAAAAAAAAAGGAAAGAAAAAAGAAAACCGTGCGGCGCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGTGCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCCGAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGCAAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGGCCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAGAGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATGACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGAAGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACTTCCTAGGAGAGGTCACTG-GCAGTGAAAAAGTCATCTGCCATTTCTACCA-CCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTAAATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAA-ACATTGCCCTGTGTGATACTGTT-CAAGAAGGGCATTGCTGCTGATCGGTTAATTGGGTTTCAAGACCTCGGCA-GCAAAGATGATTTTTCAACACAGAGCACTTGGAAAATATACTCAAGATGAAAGGTATAATTGACGAAAAGAAGAAGGATGAGGATG-ATGAAGATGA-TGAAACCTATATGTCAATGAACACGGAGGGTCAGATCTTCAACCGCTCAAGATTCTGA-TTCTGATTGAGTA-TGAAGTGTT-CCACTCCCCTGTAACATCA-AGTTTCTT-TTGTACTCTAGTTCTCAAAATATCTCTGTGTTTGTGTAATATGTATTCCGAATATTATC-ACCTGGTTAGGAAATGAGTGACTTGAAAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGG-CAAGTAGGCGTATGTGTTATCAGTTGGTATGCTTTACCCATAACAGTATCTACCAAAGGAGTTTCTACTAGCTCCTACGTTGGTCATCATGCTGCCAAATTA-CTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTGGTGACTAGTACCATCTGTAACC-ATTC-CTGTGAACCATTACAGTTGCAGTTGATC-ATTGGATTTAGTTCTCTCAAAAAAAAAAAA]

[+] EMBL AK073067             [AGCACAATCGTGCGAGGCTCGCCTAAAAAAAAAAGGAAAGAAAAAAGAAAACCGTGCGGCGCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGTGCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCCGAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGCAAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGGCCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAGAGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATGACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGAAGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACTTCCTAGGAGAGGTCACTG GCAGTGAAAAAGTCATCTGCCATTTCTACCA CCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTAAATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAA ACATTGCCCTGTGTGATACTGTT CAAGAAGGGCATTGCTGCTGATCGGTTAATTGGGTTTCAAGACCTCGGCA GCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU068055             [                        AAAAAAAAAAGGAAAGAAAAAAGAAAACCGTGCGGCGCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGTGCGAGCNGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCCGAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI802663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCCTAGGAGAGGTCACTGCACAGTGAAAAAGTCATCTGCCATTTCTACCACCCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACC ATCTATTTGGGAACTAAATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAACAC TTGCCCTGTGTGATACTGTT CAAGAAGGGCATTGCTGCTGATCGGTTAATTGGGTTTCAAGACCTCGGCA GCCAAGATGATTTTTCAACACAGAGCACTTGGAAAATATACTCAAGATGAAAGGTATAATTGACGAAAAGAAGAAGGATGAGGATG ATGAAGATGA TGAAACCTATATGTCAATGAACACGGAGGGTCAGATCTTCAACCGCTCAAGATTCTGA TTCTGATTGAGTA TGAAGTGTT CCACTCCCCTGTAACATCA AGTTTCTT TTGTACTCTAGTTCTCAAAATATCTCTGTGTTTGTGTAATATGTATTCCGAATATTATC ACCTGGTTAGGAAATGAGTGACTTGAAAAaa                                                                                                                                                                                                                                                                       ]
[-] EMBL CB674278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGCCATTTCTACCA CCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTAAATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAA ACATTGCCCTGTGTGATACTGTT CAAGAAGGGCATTGCTGCTGATCGGTTAATTGGGTTTCAAGACCTCGGCA GCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BQ907375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TACTGTTCCAAGAAGGCCNTTGCTGCTGATCGGTTAATTGGGTTTCAAGACCTC GCACGCCAAGATGATTTTTC ACACAGAGCACTTGGAAAATATACTCAAGATGAAAGGTATAATTGACGAAAAGAAGAAGGATGAGGATG ATGAAGATGA TGAAACCTATATGTC ATGAACACGGAGGGTCAGATCTTCAACCGCTCAAGATTCTGA TTCTGATTGAGTA TGAAGTGTT CCACTCCCCTGTAACATCA AGTTTCTT TTGTACTCTAGTTCTCAAAATATCTCTGTGTTTGTGTAATATGTATTCCGAATATTATC ACCTGGTTAGGAAATGAGTGACTTGAAAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGGCCAAGTAGGCGTATGTGTTATCAGTTGGTATGCTTTACCCATAACAGTATCTACCAAAGGAGTTTCTACTAGCTCCTACGTTGGTCATCATGCTGCCAAATTACCTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTGGTGACTAGTACCATCTGTAACC ATTC CTGTGAACCNTTACAGTTGCAGTTGATC ATTGGATTTAGTTCTCTCAAAAA       ]
[+] EMBL BI811505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGATGAATGAAGA GACTGAAACCTATAGGTCAATGAACAAGGAGGGTCAGATCTTCAACCGCTCAAGATTCTGA TTCTGATTGAGTA TGAAGTGTT CCACTCCCCTGTAACATCA AGTTTCTTGTTGTACTCTAGTTCTCCAAATATCTCTGTGTTTGTGTAATATGTATTCCGAATATTATCAACCTGGTTAGGAAATGAGTGACTTGAAAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGG CAAGTAGGCGTATGTGTTATCAGTTGGTATGCTTTACCCATAACAGTATCTA CAAAGGAGTTTCTACTAGCTCCTACGTTGGTCATCATGCTGCCAAATTA CTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTGGTGACTAGTACCATCTGTAACC ATTCACTGTGAACCATTACAGTTGCAGTTGATC ATTGGATTTAGTTCTCTCAAAAA       ]
[+] EMBL AU068056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACCTATATGTCAATNAACA GGAGGGTCAGATCNTCAACCGCTCAAGATTCTGA TTCTGATTGAGTA TGAAGTGTN CCACTCCCCTGTAACATCA AGTTTCTT TTGTACTCTAGTTCTCAAAATATCTCTGTGTTTGTGTAATATGTATTCCGAATATTATCAACCTGGTTAGGAAATGAGTGACTTGAAAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGG CAAGTAGGCGTATGTGTTATCAGTTGGTATGCTTTACCCATAACAGTATCTA CAAAGGAGTTTCTACTAGCTCCTACGTTGGTCATCATGCTGCCAAATTA CTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTGGTGACTAGTACCATCTGTAACCAATTCACTGTGAACCATTACAGTTGCAGTTGATCAATTGGATTTAGTTCTCTCAAAAAAAAAAAA]
[+] EMBL BI809167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tcCTGATTTCTGATTGAGTATTGAAGTGTTGCCACTCCCCTGTAACATCACAGTTTCTT TTGTACTCTAGTTCTCCAAATATCTCTGTGTTTGTGTAATATGTATTCCGAATATTATCAACCTGGTTAGGAAATGAGTGACTTGAAAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGG CAAGTAGGCGTATGTGTTATCAGTTGGTATGCTTTACCCATAACAGTATCTACC AAGGAGTTTCTACTAGCTCCTACGTTGGTCATCATGCTGCC AATTA CTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTGGTGACTAGTACCATCTGTAACC ATTC CTGTGAACCCTTACAGTTGCAGTTGATCAATTGGATTTAGTTCTCTCAAAAAA      ]


>consensus_12144#0 AGCACAATCGTGCGAGGCTCGCCTAAAAAAAAAAGGAAAGAAAAAAGAAAACCGTGCGGC GCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGT GCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCC GAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGC AAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGG CCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAG AGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATG ACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGA AGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACT TCCTAGGAGAGGTCACTGGCAGTGAAAAAGTCATCTGCCATTTCTACCACCGTGAATTTT ACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTA AATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAAA CATTGCCCTGTGTGATACTGTTCAAGAAGGGCATTGCTGCTGATCGGTTAATTGGGTTTC AAGACCTCGGCAGCAAAGATGATTTTTCAACACAGAGCACTTGGAAAATATACTCAAGAT GAAAGGTATAATTGACGAAAAGAAGAAGGATGAGGATGATGAAGATGATGAAACCTATAT GTCAATGAACACGGAGGGTCAGATCTTCAACCGCTCAAGATTCTGATTCTGATTGAGTAT GAAGTGTTCCACTCCCCTGTAACATCAAGTTTCTTTTGTACTCTAGTTCTCAAAATATCT CTGTGTTTGTGTAATATGTATTCCGAATATTATCACCTGGTTAGGAAATGAGTGACTTGA AAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGGCAAGTAGGCGTATGTGTTATC AGTTGGTATGCTTTACCCATAACAGTATCTACCAAAGGAGTTTCTACTAGCTCCTACGTT GGTCATCATGCTGCCAAATTACTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTGG TGACTAGTACCATCTGTAACCATTCCTGTGAACCATTACAGTTGCAGTTGATCATTGGAT TTAGTTCTCTCAAAAAAAAAAAA



consensusID : consensus_12144#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1163
fasta sequence
                              [GCCTACCTTTAAAAGGAAAGAAAAAAGAAAACCGTGCGGCGCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGTGCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCCGAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGCAAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGGCCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAGAGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATGACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGAAGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACTTCCTAGGAGAGGTCACTGGCAGTGAAAAAGTCATCTGCCATTTCTACCACCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTAAATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAAACATTGCCCTGCGTGATATTGTTCAAGAAGGGCATTGCTGTTGACCGGTTAGTTGGGTTTCAAGACCTCGGCAGTAAAGATGATTTTTCAACAAGAGCGTTGGAAAATATACTCAAGATGAAAGGTATAATCGACGAAAAGAAGAAGGATGAGGACGATGAAGATGACGAAACTGATATGTCAATGAACAGGAGGATTAGATCTTCAACCGCTCAAGATTCTGATTCAGAATGAACAAGAGATGATACACTCCACTGTGTCATCAAGTTTCTTTTGCACTCTGTGTGTTTATGTAATATGCATTTCGAGTTGTATCAACCCAGTTAGGAAACGAGGGATTAGAAAATGCAATAGCAACAAAGGAATTTATTTTGNGTACTGGTTAGTTAGCTTTTCATTCATACTGNCAAAGTGCGAAGTTGGCCTATGCGAGTCGGTGTGCTTTACCCTTNACAGCTTTTNTT]

[+] EMBL CB674277             [GCCTACCTTTAAAAGGAAAGAAAAAAGAAAACCGTGCGGCGCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGTGCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCCGAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGCAAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGGCCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAGAGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATGACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGAAGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACTTCCTAGGAGAGGTCACTGGCAGTGAAAAAGTCATCTGCCATTTCTACCACCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTAAATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAAACATTGCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA766615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACTTCCTAGGAGAGGTCACTGGCAGCGAAAAGGTCATCTGCCATTTCTACCACCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAGACCCTTGCACCAGTCTATTTGGGAACTAAATTCATCATGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTAGGAATCAAAACGTTGCCCTGCGTGATATTGTTCAAGAAGGGCATTGCTGTTGACCGGTTAGTTGGGTTTCAAGACCTCGGCAGTAAAGATGATTTTTCAACAAGAGCGTTGGAAAATATACTCAAGATGAAAGGTATAATCGACGAAAAGAAGAAGGATGAGGACGATGAAGATGACGAAACTGATATGTCAATGAACAGGAGGATTAGATCTTCAACCGCTCAAGATTCTGATTCAGAATGAACAAGAGATGATACACTCCACTGTGTCATCAAGTTTCTTTTGCACTCTGTGTGTTTATGTAATATGCATTTCGAGTTGTATCAACCCAGTTAGGAAACGAGGGATTAGAAAATGCAATAGCAACAAAGGAATTTATTTTGNGTACTGGTTAGTTAGCTTTTCATTCATACTGNCAAAGTGCGAAGTTGGCCTATGCGAGTCGGTGTGCTTTACCCTTNACAGCTTTTNTT]


>consensus_12144#1 GCCTACCTTTAAAAGGAAAGAAAAAAGAAAACCGTGCGGCGCCGCTCGTCCGCCCGCCGC TAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGTGCGAGCTGCTCTGCGCGGCG CCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCCGAGCAGAAGCGGCGGCGGCG GTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGCAAAGAGGGGGAGGAACAGCC ATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGGCCTTCGGCAACGTCATGGCC GCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAGAGAAAGCCCAAGCAGCAAGT GCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATGACCCAGAGCTTGAGAAGTTG CATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGAAGCGTGAAGTGCTAAAAAGG CAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACTTCCTAGGAGAGGTCACTGGC AGTGAAAAAGTCATCTGCCATTTCTACCACCGTGAATTTTACCGTTGCAAGATCATGGAT AAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTAAATTCATCAAGCTTGATGCT GAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAAACATTGCCCTGCGTGATATTG TTCAAGAAGGGCATTGCTGTTGACCGGTTAGTTGGGTTTCAAGACCTCGGCAGTAAAGAT GATTTTTCAACAAGAGCGTTGGAAAATATACTCAAGATGAAAGGTATAATCGACGAAAAG AAGAAGGATGAGGACGATGAAGATGACGAAACTGATATGTCAATGAACAGGAGGATTAGA TCTTCAACCGCTCAAGATTCTGATTCAGAATGAACAAGAGATGATACACTCCACTGTGTC ATCAAGTTTCTTTTGCACTCTGTGTGTTTATGTAATATGCATTTCGAGTTGTATCAACCC AGTTAGGAAACGAGGGATTAGAAAATGCAATAGCAACAAAGGAATTTATTTTGNGTACTG GTTAGTTAGCTTTTCATTCATACTGNCAAAGTGCGAAGTTGGCCTATGCGAGTCGGTGTG CTTTACCCTTNACAGCTTTTNTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12144#0      AGCACAATCGTGCGAGGCTCGCCTAAAAAAAAAAGGAAAGAAAAAAGAAAACCGTGCGGC 60
consensus_12144#1      --------------------GCCTACCTTTAAAAGGAAAGAAAAAAGAAAACCGTGCGGC 40
                                           *****     ******************************

consensus_12144#0      GCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGT 120
consensus_12144#1      GCCGCTCGTCCGCCCGCCGCTAGCGCCGACGTCACCTCTCTCGGCCACTGGTGCTCCGGT 100
                       ************************************************************

consensus_12144#0      GCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCC 180
consensus_12144#1      GCGAGCTGCTCTGCGCGGCGCCGCCACCTGAATCGGATCGGAGGGGAGGAGATCTCGGCC 160
                       ************************************************************

consensus_12144#0      GAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGC 240
consensus_12144#1      GAGCAGAAGCGGCGGCGGCGGTGCTCGCGGAGGAGGGAGTAGCAGCAGCAGCAGCATCGC 220
                       ************************************************************

consensus_12144#0      AAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGG 300
consensus_12144#1      AAAGAGGGGGAGGAACAGCCATGGATCCCGACGCGGTGAAGTCGACGCTCTCCAACCTGG 280
                       ************************************************************

consensus_12144#0      CCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAG 360
consensus_12144#1      CCTTCGGCAACGTCATGGCCGCCGCCGCCCGCGACTACCAGAAGGAAATTGTAGCTAAAG 340
                       ************************************************************

consensus_12144#0      AGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATG 420
consensus_12144#1      AGAAAGCCCAAGCAGCAAGTGCAAGCCATGATGAAGTTGATCTTGACGAATTATTGGATG 400
                       ************************************************************

consensus_12144#0      ACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGA 480
consensus_12144#1      ACCCAGAGCTTGAGAAGTTGCATGCGGAGAGAATTGCTGCTCTCAAGAAAGAGGTCGAGA 460
                       ************************************************************

consensus_12144#0      AGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACT 540
consensus_12144#1      AGCGTGAAGTGCTAAAAAGGCAAGGTCATGGTGAATATAGGGAGATAACTGAAGGGGACT 520
                       ************************************************************

consensus_12144#0      TCCTAGGAGAGGTCACTGGCAGTGAAAAAGTCATCTGCCATTTCTACCACCGTGAATTTT 600
consensus_12144#1      TCCTAGGAGAGGTCACTGGCAGTGAAAAAGTCATCTGCCATTTCTACCACCGTGAATTTT 580
                       ************************************************************

consensus_12144#0      ACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTA 660
consensus_12144#1      ACCGTTGCAAGATCATGGATAAGCATTTGAAGGCCCTTGCACCAATCTATTTGGGAACTA 640
                       ************************************************************

consensus_12144#0      AATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAAA 720
consensus_12144#1      AATTCATCAAGCTTGATGCTGAAAATGCTCCGTTCTTTGTCACGAAACTGGGAATCAAAA 700
                       ************************************************************

consensus_12144#0      CATTGCCCTGTGTGATACTGTTCAAGAAGGGCATTGCTGCTGATCGGTTAATTGGGTTTC 780
consensus_12144#1      CATTGCCCTGCGTGATATTGTTCAAGAAGGGCATTGCTGTTGACCGGTTAGTTGGGTTTC 760
                       ********** ****** ********************* *** ****** *********

consensus_12144#0      AAGACCTCGGCAGCAAAGATGATTTTTCAACACAGAGCACTTGGAAAATATACTCAAGAT 840
consensus_12144#1      AAGACCTCGGCAGTAAAGATGATTTTTCAACA-AGAGCG-TTGGAAAATATACTCAAGAT 818
                       ************* ****************** *****  ********************

consensus_12144#0      GAAAGGTATAATTGACGAAAAGAAGAAGGATGAGGATGATGAAGATGATGAAACCTATAT 900
consensus_12144#1      GAAAGGTATAATCGACGAAAAGAAGAAGGATGAGGACGATGAAGATGACGAAACTGATAT 878
                       ************ *********************** *********** *****  ****

consensus_12144#0      GTCAATGAACACGGAGGGTCAGATCTTCAACCGCTCAAGATTCTGATTCTGATTGAGTAT 960
consensus_12144#1      GTCAATGAACA-GGAGGATTAGATCTTCAACCGCTCAAGATTCTGATTCAGAATGAACAA 937
                       *********** ***** * ***************************** ** ***  * 

consensus_12144#0      GAAGTGTTCCACTCCCCTGTAACATCAAGTTTCTTTTGTACTCTAGTTCTCAAAATATCT 1020
consensus_12144#1      GAGATGATACACTCCACTGTGTCATCAAGTTTCTTTTGCACTCTG--------------- 982
                       **  ** * ****** ****  **************** *****                

consensus_12144#0      CTGTGTTTGTGTAATATGTATTCCGAATATTATCA-CCTGGTTAGGAAATGAGTGACTTG 1079
consensus_12144#1      -TGTGTTTATGTAATATGCATTTCGAGTTGTATCAACCCAGTTAGGAAACGAGGGATTAG 1041
                        ******* ********* *** *** *  ***** **  ********* *** ** * *

consensus_12144#0      AAAATGTACTGCCTAGTTAGCTGCATTTCATTCATACTGGCAAGTAGGCGTATGTGTTAT 1139
consensus_12144#1      AAAATGCAATAGCAACAAAGGAATTTATTTTGNGTACTGGTTAGTTAGCTTTTCATTCAT 1101
                       ****** * *  * *   **     * *  *   ******  ***  ** * *   * **

consensus_12144#0      CAGTTGGTATGCTTTACCCATAACAGTATCTACCAAAGGAGTTTCTACTAGCTCCTACGT 1199
consensus_12144#1      --ACTGNCAAAGTGCG---AAGTTGGCCTATGC-GAGTCGGTGTGCTTTACCCTTNACAG 1155
                           **  *   *      *     *  * * *  *    ** *    ** *    **  

consensus_12144#0      TGGTCATCATGCTGCCAAATTACTGGAGTAAACTAGTGTTTCAGCTAGAATGCTTGATTG 1259
consensus_12144#1      CTTTTNTT---------------------------------------------------- 1163
                          *  *                                                     

consensus_12144#0      GTGACTAGTACCATCTGTAACCATTCCTGTGAACCATTACAGTTGCAGTTGATCATTGGA 1319
consensus_12144#1      ------------------------------------------------------------
                                                                                   

consensus_12144#0      TTTAGTTCTCTCAAAAAAAAAAAA 1343
consensus_12144#1      ------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)