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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1657 fasta sequence
[GTTATCTGCGTCGTCGTCTGTCATCTCCTCCTCATCTTCTTGCTCTGCTCTGCTTCTTTCCTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAAGAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGGGAGATCGGGGCGGGCAACTTCGGGGTAGCGAAGCTGA-TGCGGAACAAGGAGACGCGGGAGCTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAGATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTGACGGGGAGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTGTGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAATACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAGTCCTCCCTCCTCCACTCCCGCCCCAAATCCACCGTCGGCACCCCCGCCTACATCGCCCCCGAGGTCCTCTCCCGCCGCGAGTACGACGGCAAGCTCGCCGACGTCTGGTCCTGCGGCGTCACCCTCTACGTCATGCTCGTCGGCGCTTACCCTTTCGAGGATCCCAAGGACCCCAAGAACTTCAGAAAGACCATCTCGCGCATCATGTCCGTCCAGTACAAGATCCCCGAGTACGTCCACGTCTCCCAGCCCTGCCGCCACCTCCTCTCCCGCATCTTCGTCGCCAACCCCTACAAGCGCATCAGCATGGGCGAGATCAAGAGCCACCCCTGGTTCCTCAAGAACCTGCCGCGCGAGCTCAAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCAC-GCGGCTGCCAGCG-CAAGTAGTGCG---------GCTGCCTTCTCGCCGCAG-AGCGTGGAGGACATCATGAGGATCGTGCA-GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG-CTAC-G-GCTGGGGCACC-G-A-CGAC-GACGA--CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC-GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC-TCGACATGTCAAACCTCCAAATCTCATGATCCATC-GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC-ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA-AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAAAAAATAGTTATACTGTACTGCTCATTGGAAAAAAAAA]
[+] EMBL AK100269 [GTTATCTGCGTCGTCGTCTGTCATCTCCTCCTCATCTTCTTGCTCTGCTCTGCTTCTTTCCTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAAGAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGGGAGATCGGGGCGGGCAACTTCGGGGTAGCGAAGCTGA TGCGGAACAAGGAGACGCGGGAGCTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAGATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTGACGGGGAGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTGTGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAATACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAGTCCTCCCTCCTCCACTCCCGCCCCAAATCCACCGTCGGCACCCCCGCCTACATCGCCCCCGAGGTCCTCTCCCGCCGCGAGTACGACGGCAAGCTCGCCGACGTCTGGTCCTGCGGCGTCACCCTCTACGTCATGCTCGTCGGCGCTTACCCTTTCGAGGATCCCAAGGACCCCAAGAACTTCAGAAAGACCATCTCGCGCATCATGTCCGTCCAGTACAAGATCCCCGAGTACGTCCACGTCTCCCAGCCCTGCCGCCACCTCCTCTCCCGCATCTTCGTCGCCAACCCCTACAAGCGCATCAGCATGGGCGAGATCAAGAGCCACCCCTGGTTCCTCAAGAACCTGCCGCGCGAGCTCAAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCAC GCGGCTTCCAGCG CAAGTAGTGCGGCTGCTGCAGCTGCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCTGGGGCACC G A CGAC GACGA CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCCTGATCCATC GTCGTCCATACTCCACTTCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCCCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACT ]
[+] EMBL OSS14663A [ CATCTTCTTGCGNTGCTCTGCTTCTTTCCTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAAGAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGGGAGATCGGGGCGGGCAACTTCGGGGTAGCGAA NTGATTGCGGAACAAGGAGACGCGGGAGCTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAGATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTGACGGGGAGGCATCTGGCGATCGTNATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATNCGAGGCGGGGAGGTTCCACGAGGACGAGG ]
[+] EMBL CA757395 [ AGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTGTGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAACACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAGTC ]
[-] EMBL CA762876 [ GTTCCTCAAGAACCTGCCGCGCGAGCTCAAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCAC GCGGCTGCCAGCG CAAGTAGTGCG GCTGCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCTGGGGCACC G A CGAC GACGA CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTTTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAAAAaaaa ]
[+] EMBL BI799853 [ GAACCT CCGCGCGAGCTCAAGGAGGAGGCGCA GCCGTCTACTACAACCGCCGGGGAGCCGATCAC GC GCTGCCAGCG CAAGTAGTGC GCTGCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCTGGGGCACC G A CGAC GACGA CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAAC AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAAaaa ]
[+] EMBL BQ906796 [ CGATCACNGCGCGTGCCAGCGTCAAGTAGTTCG GCTGCCTTCTCTCCGCAGTAGCGTGGAGGACATCATGAGGATTGTCCACGGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGGTCTACTGTGCTGGGGCACCAGTATCGACAGACGAATCGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTACAGACAGGNCGGTGCGCGAGGTTCACGCCAGCGTCGACCGTCGACATGTCAAACCTCCAAATCTCATGATCCATCTGTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCANGCATTTTNTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGAaaaa ]
[+] EMBL BM420987 [ CAATTAGT C GCTCCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCT GGGCACC G A CGAC GACGA CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCC AACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGCCAGCATTCATTGATGT AATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAaaaa ]
[+] EMBL BE040544 [ GCTGGGGCACC G A CGAC GACGA CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAATTCATAGTTATACTGTACTGCTCATTGGAAAAAAAAA]
[+] EMBL C22640 [ GAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCCTGATCCATC GTCGTCCATACTCCACTTCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCCCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAAAAAAa ]
[+] EMBL BI809319 [ CGATCATTTCTTTTTGGATCAACCCCAATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACACAACTTTGGGTACATTATTACATCACCTG TTATATGAGTAA GCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||