These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12146#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2108 fasta sequence [GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAATCCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTCCTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGCTCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGGCCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACCTCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCGTCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACAAGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATGGTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAAAACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCCCTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTGATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG-CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCATAGTCTGCT] [+] EMBL AK066800 [GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAATCCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTCCTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGCTCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGGCCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACCTCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCGTCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACAAGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATGGTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAAAACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCCCTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTGATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAG ] [+] EMBL AK099380 [ TCCTCTCCTCCCCCACCCCTCCTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGCTCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGGCCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACCTCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCGTCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACAAGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATGGTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAAAACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCCCTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTGATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCGCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGT ] [+] EMBL AK104008 [ CCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACCTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGT ] [+] EMBL CB646829 [ AAGCTTCATCTTCCTCCATATCCCGGCACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCCTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCACGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTACAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCATCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACCGATTAACACCCAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACT ] [+] EMBL CA759153 [ TGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTCGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAGATGCCATTAAATCTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACGTCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAAaaaaaaa ] [-] EMBL CB655997 [ GAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCA ] [-] EMBL CB646830 [ TTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCATTGTCTGCT] [+] EMBL BI804435 [ CAA GCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGA CACAGTATGCCACATCGAGAGGTTGT CCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGT CCATGATTA GTCGCGTGTTTGAGACTGTGAGTCCCTGAAGCTCTGCTTTTCGACATGCCCTTCACACATCTGATGTTCTCTGAAGCCACAGAGTGGATGAATCCATGAA GCCCTTCTCTTGGTCATAAGATTTTTCTGTAAAT CC TTAAA TTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATC CAGCCTGGA AAGACTGTTGGACATA GTCGACGTCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATAAAAa ] [-] EMBL CB638966 [ TTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTACCCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCAT ] consensusID : consensus_12146#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence [TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGTNGCCNNAANGCNCNTGATTTATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCTGANAAGTATTTCCACAGCCGCCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAACANANCACTATCATTCCTGGAANGGAAGTTCTTCCCANGCGTTCNAGGAATTGGGAACAAAAGTTTTCCTGAAGGGTGAGTTTGACATGCCANTTATTTCCCT] [+] EMBL BE229716 [TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGTNGCCNNAANGCNCNTGATTTATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCTGANAAGTATTTCCACAGCCGCCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAACANANCACTATCATTCCTGGAANGGAAGTTCTTCCCANGCGTTCNAGGAATTGGGAACAAAAGTTTTCCTGAAGGGTGAGTTTGACATGCCANTTATTTCCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12146#0 GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAAT 60 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTC 120 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGC 180 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGG 240 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACC 300 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCG 360 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACA 420 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 AGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATG 480 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 GTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAA 540 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 AACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCC 600 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTG 660 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 ATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCA 720 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 ACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTG 780 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAAC 840 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCAC 900 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 ACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATC 960 consensus_12146#1 --------------------TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATC 40 ***** ********************************** consensus_12146#0 TTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACA 1020 consensus_12146#1 TTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACA 100 ************************************************************ consensus_12146#0 TTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTG 1080 consensus_12146#1 TTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTG 160 ************************************************************ consensus_12146#0 ATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAAC 1140 consensus_12146#1 ATCCATTTGATCAGTTCGTTAGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAAC 220 *********************************** ***** ****************** consensus_12146#0 CAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTC 1200 consensus_12146#1 CAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTC 280 ************************************************* ********** consensus_12146#0 TTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTA----------TACAAATTATGGT 1250 consensus_12146#1 TTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGT 340 ************************************* ************* consensus_12146#0 AGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAAT 1310 consensus_12146#1 NGCCNNAANGCNCNTGATTTATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAAT 400 *** ** ** * ************ ********************************* consensus_12146#0 GAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCT 1370 consensus_12146#1 GAGATGAACCGGCAGGTAAGANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCT 460 ********************* ** ** ********** ** ****** ** ** ***** consensus_12146#0 GAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAG 1430 consensus_12146#1 GANAAGTATTTCCACAGCCGCCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAA-CAN 519 ** ********************** * ****** ************* ** **** ** consensus_12146#0 AGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGG-AACAAAA 1489 consensus_12146#1 ANCACTATCATTCCTGGAANGGAAGTTCTTCC-CANGCGTTCNAGGAATTGGGAACAAAA 578 * ***************** *********** ** **** * ********* ******* consensus_12146#0 GTATTCTGATGGCAGCGTGATCCCAAAAC-CTGATTACTGGGGTGGGTACAGATTAACAC 1548 consensus_12146#1 GTTTTC---CTGAAGGGTGAGTTTGACATGCCANTTATTTCCCT---------------- 619 ** *** * ** **** * * * *** * * consensus_12146#0 CAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATT 1608 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAG 1668 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAAT 1728 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGC 1788 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 GTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGAT 1848 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 GTTCTCTGAAGCACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTT 1908 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATT 1968 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 ATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAA 2028 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 TGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTG 2088 consensus_12146#1 ------------------------------------------------------------ consensus_12146#0 CTGCAATGGCATAGTCTGCT 2108 consensus_12146#1 -------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||