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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12156#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3118 fasta sequence
[GCTTGCCCCGCCGCCTTCCTCGCGACCCCCCCCCCTCTCCTCTCGCCGCCGCCGCGTCCGCTCCACCCGGCGGCGGAGTACTCTCCATCCGCCGCCGCCGCTTGGTACTAGATTTGTGCTGGTAGCCGCGTAGATCTAACTAGAGAGAGAGAGAGAAGGGAGTGAGTGGCGAGGATGAGCGTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCCGTGGCGCGGCAGCGGGGCATCGACGTGGTGCTCAACGAGGAGTCGAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCAAGGTACCTTGGGGAGGACAGGGCGTTCACCCCCATGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGAATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTT--GGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACTGATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGATTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAAATGGCTCTTCAGGACAGAGTAATGGAAGACACCAAGGAGAAAAAGAATGCTGTCGAGGCTTATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACAACGATTTTGTCATGTCTGAGTACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTACGAAGATGGTGAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGATCCTATTGAGATCCGCTACAAAGAGTGGGCTGAAAGAAGCTCTTCTATTAACCAGCTGGTACATTGCATCAACGGTTTTAAAGAGGTTGCATTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA-TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA-TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA-TGAGCTAGGA-GAACCGGATG-TTTTTTT--GGGGTGCT-GTACTT-GGTGGTCAC-TTCA--CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCAC-TTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCCAATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCATGGGAAAAAAAGATCTCAATACATTTTTTA]
[+] EMBL AK122040 [GCTTGCCCCGCCGCCTTCCTCGCGACCCCCCCCCCTCTCCTCTCGCCGCCGCCGCGTCCGCTCCACCCGGCGGCGGAGTACTCTCCATCCGCCGCCGCCGCTTGGTACTAGATTTGTGCTGGTAGCCGCGTAGATCTAACTAGAGAGAGAGAGAGAAGGGAGTGAGTGGCGAGGATGAGCGTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCCGTGGCGCGGCAGCGGGGCATCGACGTGGTGCTCAACGAGGAGTCGAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCAAGGTACCTTGGGGAGGACAGGGCGTTCACCCCCATGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGAATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTT GGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACTGATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGATTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAAATGGCTCTTCAGGACAGAGTAATGGAAGACACCAAGGAGAAAAAGAATGCTGTCGAGGCTTATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACAACGATTTTGTCATGTCTGAGTACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTACGAAGATGGTGAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGATCCTATTGAGATCCGCTACAAAGAGTGGGCTGAAAGAAGCTCTTCTATTAACCAGCTGGTACATTGCATCAACGGTTTTAAAGAGGTTGCATTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA TGAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCAC TTCA CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCAC TTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCCAATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCATGGGAAGAAACGCTCTCAATACATTTTTTA]
[+] EMBL CB634367 [ GACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCCAGGTATCTCGGGGAGGACAGGGCGTTCACCCCCACGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGGATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGATAAATTTAAGGATGAGTACAAAATAGACGTCTACCAGAATGCCCGCGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGA ]
[+] EMBL CA755265 [ GCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGAATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACNACGTGTGAAGGCTCCATTGGGAAAGGCCTTGGCTGAAGCTGGCTTAAC ACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTTTGGGAAGGGAACCGAGGAGGACTATGAATGCCAGTG ]
[+] EMBL CB668414 [ TGCTACTACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTT GGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAAT ]
[-] EMBL CB634368 [ CAACGGTTTTAAAGAGGTTGCGTTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAAAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA TGAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCAC TTCA CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCACTTTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCCAATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCA AAAAAAAGA ]
[-] EMBL CB668415 [ GGTTGCATTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGANTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA TGAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCAC TTCA CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCACTTTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTTTAAACTGTAGCTTTTGTCCAATGGTCCATAACATGTAAGGAAAAACAAATTTTGGTCCATGGGAAAAAAAaaaaaga ]
[+] EMBL AU066294 [ AGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGG CCGTG A TGAGCTAGGA G ACCGGATGTTTTTTTT GGGGTACTNGNACTT GGTGGT AA TTCA CTT GTTGGGATTGTGA ATGGANATGTTGGTA GGT NAATGCTGGT GC TATCCCTTGAATCAC TTTTTTTcaccctaa ]
[+] EMBL AU066203 [ AGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAATTAAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCACTTTCA CTTGGTTGGGATTGTGACATGGA ]
[+] EMBL AU066289 [ AGCACTTGACAGGTCGTGCAGA CGANTTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAANTGCTTCCTCATGTGGTTATGGTCACTTNGTTTTAGGGCCGTGAA TGAGCTAGGAGGAACCGGATG TTTTTTTTGGGGGTGCT GTACTTNGGTGGGCAC TTTAANTTTGGTTGGG ]
consensusID : consensus_12156#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence
[TTCCGCNCGATGTTCNATCCNCGGAAAAAANTAANTGNTCTAGTCACAANTAAACTCCNNTGNTCNAATNCTTCCTCANGTNGTTNTNGCCNCNCCGTAATACGCCCCTGAATGANCTANGANAACCCGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTTTGGGGATTGTGACATGGACATNTTTGTAACGGGTNAAGGNGGGGGTGGGCTTTCTCCCTTGNANTCACTTTTANTTTCTCCTCCANATCCNGGACGGTNNAATTNGGGGATCANAAGGGGTGGNCACCCCCCGTTTNTCCNGGCTTTGGTTCANCACGGGTTCTTAACCTTTACCCCTGGGT]
[+] EMBL BE228241 [TTCCGCNCGATGTTCNATCCNCGGAAAAAANTAANTGNTCTAGTCACAANTAAACTCCNNTGNTCNAATNCTTCCTCANGTNGTTNTNGCCNCNCCGTAATACGCCCCTGAATGANCTANGANAACCCGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTTTGGGGATTGTGACATGGACATNTTTGTAACGGGTNAAGGNGGGGGTGGGCTTTCTCCCTTGNANTCACTTTTANTTTCTCCTCCANATCCNGGACGGTNNAATTNGGGGATCANAAGGGGTGGNCACCCCCCGTTTNTCCNGGCTTTGGTTCANCACGGGTTCTTAACCTTTACCCCTGGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12156#0 GCTTGCCCCGCCGCCTTCCTCGCGACCCCCCCCCCTCTCCTCTCGCCGCCGCCGCGTCCG 60
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CTCCACCCGGCGGCGGAGTACTCTCCATCCGCCGCCGCCGCTTGGTACTAGATTTGTGCT 120
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GGTAGCCGCGTAGATCTAACTAGAGAGAGAGAGAGAAGGGAGTGAGTGGCGAGGATGAGC 180
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCCGTGGCGCGGCAGCGGGGC 240
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 ATCGACGTGGTGCTCAACGAGGAGTCGAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGC 300
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAAC 360
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGC 420
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCAC 480
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GCAAGGTACCTTGGGGAGGACAGGGCGTTCACCCCCATGCAGCTGCTCGCCATGGTGCTC 540
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATT 600
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATC 660
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGA 720
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 ATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGG 780
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCG 840
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTT 900
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTT 960
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 AGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCA 1020
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAG 1080
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTG 1140
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCT 1200
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTTGGAAAGGAACCGAGGAGGACT 1260
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 ATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCC 1320
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 ACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCA 1380
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGT 1440
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTT 1500
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGC 1560
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATC 1620
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTA 1680
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGT 1740
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACT 1800
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACT 1860
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGA 1920
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAA 1980
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 ATGGCTCTTCAGGACAGAGTAATGGAAGACACCAAGGAGAAAAAGAATGCTGTCGAGGCT 2040
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACAACGATTTTGTCATGTCTGAG 2100
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 TACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTACGAAGATGGT 2160
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGAT 2220
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CCTATTGAGATCCGCTACAAAGAGTGGGCTGAAAGAAGCTCTTCTATTAACCAGCTGGTA 2280
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 CATTGCATCAACGGTTTTAAAGAGGTTGCATTGTCTAATAGCCAAGCATTTGATCACATC 2340
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATA 2400
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCT 2460
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGATTATGTCAAAGCCG 2520
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 AAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACA 2580
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 ACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAA 2640
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACA 2700
consensus_12156#1 ------------------------------------------------------------
consensus_12156#0 GACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAA-GAA 2759
consensus_12156#1 ----TTCCGCNCGAT--GTTCNATCCNCGGAAAAAANTAANTGNTCTAGTCACAANTAAA 54
** ** * * * * ** * * ** * * ** * ** * **
consensus_12156#0 CTCCTGTGATCGAATGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAATG 2819
consensus_12156#1 CTCCNNTGNTCNAATNCTTCCTCANGTNGTTNTNGCCNCNCCGTAATACGCCCCTGAATG 114
**** ** ** *** ******** ** *** * * * * ** ** **** ******
consensus_12156#0 AGCTAGGAGAACCGGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTT- 2878
consensus_12156#1 ANCTANGANAACCCGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTTT 174
* *** ** **** *********************************************
consensus_12156#0 -GGGATTGTGACATGGACATGTTGGTAAGGG--TAAAATGCTGGTGG--CTTGTCCCTTG 2933
consensus_12156#1 GGGGATTGTGACATGGACATNTTTGTAACGGGTNAAGGNGGGGGTGGGCTTTCTCCCTTG 234
******************* ** **** ** ** * ***** ** *******
consensus_12156#0 AAT-CACTTTT-TTTTCTTCTCT-TATTTAGGATGGTTGAATTGGGG-ATGAGAGGGCAT 2989
consensus_12156#1 NANTCACTTTTANTTTCTCCTCCANATCCNGGACGGTNNAATTNGGGGATCANAAGGGGT 294
* ******* ***** *** ** *** *** **** *** ** * * ** *
consensus_12156#0 G-CCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCC 3048
consensus_12156#1 GGNCACCCCCCGTTTNTCCNGGCTTTGGTTCANCACGGGTTCT-----TAACCTTTACCC 349
* **** *** *** * * *** ******** ******* ** * *** **
consensus_12156#0 AATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCATGGGAAAAAAAGATCTCAAT 3108
consensus_12156#1 CTGGGT------------------------------------------------------ 355
***
consensus_12156#0 ACATTTTTTA 3118
consensus_12156#1 ----------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||