cluster # 12166

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Oryza sativa
cluster # 12166 cluster # 12166 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12166#0 length = 1674 sequences # 3

consensus_12166#1 length = 1160 sequences # 7

consensusID : consensus_12166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1674
fasta sequence

                              [CCTCTCCTCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACTGCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAGCCCCTGCTTCCTCTGCTTCGTACTTGCCTCTGCTTCTCTCTCTCTCTCTCTCTCTCTCTTCAAATATCCATCTATCTATACATTGCTTACCTAAATCCCTATATACTAGTAATAACTCATTCTCTCTCTCTCTCTCTTAGTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTCCTTCAT-CCAAACTAATCTCGACCTCTGCAAGTGGGCT-GCTC-TTGCTATTGTTGCTACACAGGCACTTTC-ACTTCTC-CTGG-CAACCATCTTACGATCCATGCTTTCTACCCCGAGTG-CCGACTATGA-CAGTGATGAAGATTTTGTGGTCAT-AAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAAAAAAGCTGTTCAGTGGTCGGTGTAAAGGGGGATCATATATGCGAGATTCAGGCCTGGTACTCCAGCTCGTAGCTTTGAATTTGTCACATCTAGTGATTGTATACATATATAGCTTGGGGGCTGATTTTGCCATCAAATTCTATTGAATTTATCAGCTCTTTTTTTTCAATATTGAACTAATGTGTTAATAGAGGATAAATCAAGTCTATATGGACTCACGAACTTGGGAGCCAGTTTATGCTTTGGGGTTGCAGAGGTTTGAAGAACGTGAAAGGGAATGTAGCCTAGTGGTTGTTGTAACCTGAATATAAATTTTCATAGGAGCGAATTTCAGATTGGGTTGTTTGTGAGGCTAATTTTCTAATTAAATGGCTGTATATATCTGGTTGGATGTAGAGGCCGGGTAAAAAAATACCCTTCTCAAAAAAAA]

[+] EMBL AK120175             [CCTCTCCTCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACTGCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAGCCCCTGCTTCCTCTGCTTCGTACTTGCCTCTGCTTCTCTCTCTCTCTCTCTCTCTCTCTTCAAATATCCATCTATCTATACATTGCTTACCTAAATCCCTATATACTAGTAATAACTCATTCTCTCTCTCTCTCTCTTAGTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTCCTTCAT CCAAACTAATCTCGACCTCTGCAAGTGGGCT GCTC TTGCTATTGTTGCTACACAGGCACTTTC ACTTCTC CTGG CAACCATCTTACGATCCATGCTTTCTACCCCGAGTG CCGACTATGA CAGTGATGAAGATTTTGTGGTCAT AAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAGATAAGCTGTTCAGTGGTCGGTGTAAAGGGGGATCATATATGCGAGATTCAGGCCTGGTACTCCAGCTCGTAGCTTTGAATTTGTCACATCTAGTGATTGTATACATATATAGCTTGGGGGCTGATTTTGCCATCAAATTCTATTGAATTTATCAGCTCTTTTTTTTCAATATTGAACTAATGTGTTAATAGAGGATAAATCAAGTCTATATGGACTCACGAACTTGGGAGCCAGTTTATGCTTTGGGGTTGCAGAGGTTTGAAGAACGTGAAAGGGAATGTAGCCTAGTGGTTGTTGTAACCTGAATATAAATTTTCATAGGAGCGAATTTCAGATTGGGTTGTTTGTGAGGCTAATTTTCTAATTAAATGGCTGTATATATCTGGTTGGATGTAGAGGCCGGGTAAAAAAATACCCTTCTCAAAAAAAA]
[+] EMBL AU085890             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCNTAATCCCAAACNAACCTCGACNTCTGAAAGTGGGCTGGTTCTTTNCTATTGTTGCTACACAGGCACTTTCAACTTCTCNCTGGCCAACCATCTTCCGATCCATGCTTTCTACCCCGAGTGCCCGACTATGACCAGTGATGAAGATTTTGTGGTCATAAAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGNCCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGNCTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF308743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTTTCTACCCCGAGTG CCGACTATGA CAGTGATGAAGATTTTGTGGTCAT AAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_12166#0
CCTCTCCTCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGC
CGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACT
GCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCG
CCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCC
AAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT
GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAGCCCCTGCTTCCTCTGCT
TCGTACTTGCCTCTGCTTCTCTCTCTCTCTCTCTCTCTCTCTTCAAATATCCATCTATCT
ATACATTGCTTACCTAAATCCCTATATACTAGTAATAACTCATTCTCTCTCTCTCTCTCT
TAGTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTA
TTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAAT
CTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTT
GCTACACAGGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCG
AGTGCCGACTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCC
CAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTA
TGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACA
CTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGA
TGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAA
TATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTA
CATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTG
TTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGG
TGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAAAAAAGCTGTTCAGTGG
TCGGTGTAAAGGGGGATCATATATGCGAGATTCAGGCCTGGTACTCCAGCTCGTAGCTTT
GAATTTGTCACATCTAGTGATTGTATACATATATAGCTTGGGGGCTGATTTTGCCATCAA
ATTCTATTGAATTTATCAGCTCTTTTTTTTCAATATTGAACTAATGTGTTAATAGAGGAT
AAATCAAGTCTATATGGACTCACGAACTTGGGAGCCAGTTTATGCTTTGGGGTTGCAGAG
GTTTGAAGAACGTGAAAGGGAATGTAGCCTAGTGGTTGTTGTAACCTGAATATAAATTTT
CATAGGAGCGAATTTCAGATTGGGTTGTTTGTGAGGCTAATTTTCTAATTAAATGGCTGT
ATATATCTGGTTGGATGTAGAGGCCGGGTAAAAAAATACCCTTCTCAAAAAAAA

consensusID : consensus_12166#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1160
fasta sequence

                              [TCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT-GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAAC-AGCCCCTGCTTCCTCTGCTTCTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTTGCTACACAGGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCGAGTGCCGACTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK065285             [TCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCACGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAAC AGCCCCTGCTTCCTCTGCTTCTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTTGCTACACAGGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCGAGTGCCGACTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAAGGTGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAGA                                           ]
[+] EMBL AK098979             [TCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCTGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAAC AGCCCCTGCTTCCTCTGCTTCTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTTGCTACACAGGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCGAGTGCCGACTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGGCCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACATTGTTTAATAGTTGGGAGTATC                                                           ]
[+] EMBL CF308742             [         TCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAAC AGCCCCTGCTTCCTCTGCTTCTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTTGCTACACAGGCACTTTCACTTCTCCT GCAACCATCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU091443             [                       AAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGG NGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAAC AGCCCTTGCTTCCTCTGCTTCTANACCATCTTGGC  TCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTA TCTTTAA AAAAACTGGAT CAGGATTTGCAANATGACCG AATGGAGAA TCGATAA NTA ATTCCTT ATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C72783               [                              AAGTAAGTCGTCGCCGCCGCCGCCGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGG GGCCTCCACTGCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACTNGCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAAGCCCCTGCTTCCTCTGCTTCTANAACATCTTGGCTGTCGTAATGATGCTCCTCGAAGCTGCTCTCGCCGCTGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BE039578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCCCAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTGGGT                                                                                                                                         ]
[+] EMBL AU030851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATTTCTTTTAATATTGTACTATCNTTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTGCATATTNCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCNCATTTGTGTTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGNGGGTGCAACATTGTTTAATAGTTGGGNGTATCTCTTNTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12166#1
TCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGCCGCCGCC
GCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACTGCTGCCT
GGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCGCCCTACT
CTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCCAAGACCT
ACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACTGCCTGCT
TCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAGCCCCTGCTTCCTCTGCTTCTACAC
CATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTATTCTTTAA
CAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAATCTACTTTC
CTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTTGCTACACA
GGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCGAGTGCCGA
CTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCCCAAGGTGC
TCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTATGGAGCTC
AAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACACTGGATCC
AAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGATGATGAAG
AAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAATATTGTAC
TATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTACATAGTTG
CATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTGTTTATGTG
GGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGGTGCAACAT
TGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12166#0      CCTCTCCTCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGC 60
consensus_12166#1      -------TCCCCCTCCTCCTGTCTCAACAGAAAACCCAAGTAAGTCGTCGCCGCCGCCGC 53
                              *****************************************************

consensus_12166#0      CGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACT 120
consensus_12166#1      CGCCGCCGCAATCGTGGGTGATGGGTCGTGCTCGTCGGAGCGCCGGCGGCGGCCTCCACT 113
                       ************************************************************

consensus_12166#0      GCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCG 180
consensus_12166#1      GCTGCCTGGCCTTCCTCTTCAAGTTCCTCGCCTTCCTCCAGGCCTTCGCCGCTGTCTCCG 173
                       ************************************************************

consensus_12166#0      CCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCC 240
consensus_12166#1      CCCTACTCTACGCCGCATGGATCCTCTCCCGTTGGGCGCGCCACCACCATCTCCACCTCC 233
                       ************************************************************

consensus_12166#0      AAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT 300
consensus_12166#1      AAGACCTACTCCCCGACCTCTGGTTCGTCTGCGCCCTCATGGCTGCCGGCCTCTTCTACT 293
                       ************************************************************

consensus_12166#0      GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAGCCCCTGCTTCCTCTGCT 360
consensus_12166#1      GCCTGCTTCTCCTCGCCGGATGCGTTGCTGCCGAGATCAACAGCCCCTGCTTCCTCTGCT 353
                       ************************************************************

consensus_12166#0      TCGTACTTGCCTCTGCTTCTCTCTCTCTCTCTCTCTCTCTCTTCAAATATCCATCTATCT 420
consensus_12166#1      TC---------------------------------------------------------- 355
                       **                                                          

consensus_12166#0      ATACATTGCTTACCTAAATCCCTATATACTAGTAATAACTCATTCTCTCTCTCTCTCTCT 480
consensus_12166#1      ------------------------------------------------------------
                                                                                   

consensus_12166#0      TAGTACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTA 540
consensus_12166#1      ---TACACCATCTTGGCTGTCGTTATGATGCTCCTCGAAGCTGCTCTCGCCGCTGATTTA 412
                          *********************************************************

consensus_12166#0      TTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAAT 600
consensus_12166#1      TTCTTTAACAAACACTGGATCCAGGATTTGCCATATGACCGCACTGGAGAACTCGATAAT 472
                       ************************************************************

consensus_12166#0      CTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTT 660
consensus_12166#1      CTACTTTCCTTCATCCAAACTAATCTCGACCTCTGCAAGTGGGCTGCTCTTGCTATTGTT 532
                       ************************************************************

consensus_12166#0      GCTACACAGGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCG 720
consensus_12166#1      GCTACACAGGCACTTTCACTTCTCCTGGCAACCATCTTACGATCCATGCTTTCTACCCCG 592
                       ************************************************************

consensus_12166#0      AGTGCCGACTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCC 780
consensus_12166#1      AGTGCCGACTATGACAGTGATGAAGATTTTGTGGTCATAAGGAGGCCACTTCTGGTTGCC 652
                       ************************************************************

consensus_12166#0      CAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTA 840
consensus_12166#1      CAAGGTGCTCCCGCTTATCTTCCTACCACCGCCGATACTAGAGGTTTCCATCCAGACCTA 712
                       ************************************************************

consensus_12166#0      TGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACA 900
consensus_12166#1      TGGAGCTCAAGAATGAGACACAAGTATGGATTGAACTCAAGCAACTACACCTACAACACA 772
                       ************************************************************

consensus_12166#0      CTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGA 960
consensus_12166#1      CTGGATCCAAATGCACCACCACCTCAGTAAGCAGCGTGTGACTGATGATGATGTTAGAGA 832
                       ************************************************************

consensus_12166#0      TGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAA 1020
consensus_12166#1      TGATGAAGAAGCATGCCTTTGTCCCAAACACCTAGTATATACAAACACCATTTCTTCTAA 892
                       ************************************************************

consensus_12166#0      TATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTA 1080
consensus_12166#1      TATTGTACTATCATTGTTTGCATGGTTAGTAATTTTTCATTTTATGCCCTCTGGATTGTA 952
                       ************************************************************

consensus_12166#0      CATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTG 1140
consensus_12166#1      CATAGTTGCATATTTCATTGCATTTTAGTACTTTCATCAGTTGATATCTGCACATTTGTG 1012
                       ************************************************************

consensus_12166#0      TTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGG 1200
consensus_12166#1      TTTATGTGGGTGGTACATGTTGGAGCTCTGCATCTGTACAAGTGTATTTGTGCATGAGGG 1072
                       ************************************************************

consensus_12166#0      TGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAAAAAAGCTGTTCAGTGG 1260
consensus_12166#1      TGCAACATTGTTTAATAGTTGGGAGTATCTCTTCTTTCTACAAGAAAAAAAAAAAAAAAA 1132
                       ******************************************* ****       *    

consensus_12166#0      TCGGTGTAAAGGGGGATCATATATGCGAGATTCAGGCCTGGTACTCCAGCTCGTAGCTTT 1320
consensus_12166#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------------- 1160
                              ***     *  * * *    *                                

consensus_12166#0      GAATTTGTCACATCTAGTGATTGTATACATATATAGCTTGGGGGCTGATTTTGCCATCAA 1380
consensus_12166#1      ------------------------------------------------------------
                                                                                   

consensus_12166#0      ATTCTATTGAATTTATCAGCTCTTTTTTTTCAATATTGAACTAATGTGTTAATAGAGGAT 1440
consensus_12166#1      ------------------------------------------------------------
                                                                                   

consensus_12166#0      AAATCAAGTCTATATGGACTCACGAACTTGGGAGCCAGTTTATGCTTTGGGGTTGCAGAG 1500
consensus_12166#1      ------------------------------------------------------------
                                                                                   

consensus_12166#0      GTTTGAAGAACGTGAAAGGGAATGTAGCCTAGTGGTTGTTGTAACCTGAATATAAATTTT 1560
consensus_12166#1      ------------------------------------------------------------
                                                                                   

consensus_12166#0      CATAGGAGCGAATTTCAGATTGGGTTGTTTGTGAGGCTAATTTTCTAATTAAATGGCTGT 1620
consensus_12166#1      ------------------------------------------------------------
                                                                                   

consensus_12166#0      ATATATCTGGTTGGATGTAGAGGCCGGGTAAAAAAATACCCTTCTCAAAAAAAA 1674
consensus_12166#1      ------------------------------------------------------