These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12184#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 773 fasta sequence [GTCGGNCGGCCTCGGCCTTGGGCCANCGACGACCGTTCCCTCGAAGCCGCTTCTCCCACTTTCGGCGAGATCCTCGAGTCCAAGATCATCAACGATCGGNAGACGGGGAGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACGGCCAGCGCGGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACTTACCGTAT] [+] EMBL AU082501 [GTCGGNCGGCCTCGGCCTTGGGCCANCGACGACCGTTCCCTCGAAGCCGCTTCTCCCACTTTCGGCGAGATCCTCGAGTCCAAGATCATCAACGATCGGNAGACGGGGAGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACGGCCAGCGCGGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCGNCGNCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAA ] [-] EMBL CF326221 [ AGCGCGGCGGAGGCGGAGGCTACGGTGACGGCGGCGGCTACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAc ] [+] EMBL AU183159 [ CGNAGGCTACGGTGCCGGCGGCGGCTACGGTGGTGNCGGCGGCGGTGGCTACGGCCAGCNCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCANCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGANCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAAAAAAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCCAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU094592 [ CTACGGTGGTGGCGGCGNCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAA ] [+] EMBL AU078374 [ TACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCAGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTTATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAA ] [+] EMBL AU182380 [ GGCGNCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGNCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCANCCGCGGNGGCGGCAACTCCGACGGGAACTGGAGGAACTGANCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCNNCCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACNATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAANAANAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU223134 [ TGGCTACGGCCAGCNCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTNCGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCT AAAAAAAAAAAAA ] [+] EMBL AU082500 [ CGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGNCGGCGGCGGCTACGNCGGTGGCTACGGCAGCCGCGNCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAA ] [-] EMBL CF335534 [ CGCCGGCTAGGGCGGTGGCTACGGCATCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGAAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGCTTTGTGTGGAAGTACTATTTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTAGTCAAAAAAAAAAAAA ] [+] EMBL CF328479 [ TCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACTTACCGTAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||