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Oryza sativa
cluster # 12188 cluster # 12188       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12188#0 length = 2208 sequences # 1  
consensus_12188#1 length = 2022 sequences # 6  
consensus_12188#2 length = 1505 sequences # 3  

consensusID : consensus_12188#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2208
fasta sequence
                              [AGCATCAGCTTATTACCAATCTTTTTCATTCCCCTCTCTTGGAACGTGCTGGTCTCCTCGCTTCTACACTCTCTTGATCAGCTCTCACCACTATGTACACTTGATCGTCATTTGCCACAAGTTAAAATTGATACAGAGCAACACAAAGAGCTAAACTAGGGGCAGTAACGCGGTAGTTGTACTCGATCATATCGATCCATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCGCGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGTGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGGCGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTCGCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCATGACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCGCCGGGGCGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCGGTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCATCTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCTCCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCTTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCACCGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGAGGAGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCACAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGAGGCCCAGTCGCCCGAGGGCGTCAATCGCCACCTCGCCGACGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCAGGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCCGTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCAGCTGATGGACGCCGTGCAGCTGCCCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACGCCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGACGACGAAAAGCCAACAACAGAAGCAGATGCCAAGCTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACATTGAACAAGTTTAAACCGGTTCACGTCAAAATCCAACGAACGAGTCGATCGAACCGGGCAGATTAAGCCGGTTCTCGATGGGTTTCGTCACTCCCGCACCATATGCCACTTCCAAGCGGCAACCGGTCCGAGTGGCCGAGTCAGAGTGGGGAATAAAAAAGCAATCGCCGTAAAACCTTGATCACTGTTGGCTCAGAGGAAAAGTTGACACATGCAGATAGCATCAAGGAGAAATGGGGAATAAAAAAGCTCACTTATCATAAAGTTGTCAATACGGCATTGTGGCTTTCATGCCATGAATGTAGGCACGTATAGCGTCAAATCCATGTTAGTGCGTTGTTATTTTTAATTATACCAGATAACCAGAATGTTATTTGATCTGATCCCATATAGGAGCAGGAAAGAAAGTTCAGGGCCTGTCATATATGGTCGTCATGCACGCACCATTTTCTTTCTCTAACCACAGTACAAAGGCTACCAGA]

[+] EMBL AK110383             [AGCATCAGCTTATTACCAATCTTTTTCATTCCCCTCTCTTGGAACGTGCTGGTCTCCTCGCTTCTACACTCTCTTGATCAGCTCTCACCACTATGTACACTTGATCGTCATTTGCCACAAGTTAAAATTGATACAGAGCAACACAAAGAGCTAAACTAGGGGCAGTAACGCGGTAGTTGTACTCGATCATATCGATCCATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCGCGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGTGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGGCGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTCGCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCATGACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCGCCGGGGCGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCGGTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCATCTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCTCCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCTTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCACCGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGAGGAGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCACAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGAGGCCCAGTCGCCCGAGGGCGTCAATCGCCACCTCGCCGACGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCAGGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCCGTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCAGCTGATGGACGCCGTGCAGCTGCCCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACGCCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGACGACGAAAAGCCAACAACAGAAGCAGATGCCAAGCTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACATTGAACAAGTTTAAACCGGTTCACGTCAAAATCCAACGAACGAGTCGATCGAACCGGGCAGATTAAGCCGGTTCTCGATGGGTTTCGTCACTCCCGCACCATATGCCACTTCCAAGCGGCAACCGGTCCGAGTGGCCGAGTCAGAGTGGGGAATAAAAAAGCAATCGCCGTAAAACCTTGATCACTGTTGGCTCAGAGGAAAAGTTGACACATGCAGATAGCATCAAGGAGAAATGGGGAATAAAAAAGCTCACTTATCATAAAGTTGTCAATACGGCATTGTGGCTTTCATGCCATGAATGTAGGCACGTATAGCGTCAAATCCATGTTAGTGCGTTGTTATTTTTAATTATACCAGATAACCAGAATGTTATTTGATCTGATCCCATATAGGAGCAGGAAAGAAAGTTCAGGGCCTGTCATATATGGTCGTCATGCACGCACCATTTTCTTTCTCTAACCACAGTACAAAGGCTACCAGA]


>consensus_12188#0 AGCATCAGCTTATTACCAATCTTTTTCATTCCCCTCTCTTGGAACGTGCTGGTCTCCTCG CTTCTACACTCTCTTGATCAGCTCTCACCACTATGTACACTTGATCGTCATTTGCCACAA GTTAAAATTGATACAGAGCAACACAAAGAGCTAAACTAGGGGCAGTAACGCGGTAGTTGT ACTCGATCATATCGATCCATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGG GTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCGCGAGGCCGGCCGCTGCCGGCGG GCCGCCGTGGTGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGGCG TCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCAC GGCGTCAAGGTCGGCCTCGCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTC TACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCATGACCGTCGTCGTCGTCTTCGAG TTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCGCC GGGGCGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCG GTCGTCCGCAGCGGCTCGGTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATA CCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCATCTTCATCCTGACGTACAGCCTG GTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCTCC ACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCTTGCTCATCTGCCCCGTGTGG GCCGGGCAGGAGCTGCACCGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTC GAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGAGGAGGCGGCGGGGCCGGAGTAC AAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCAAG GCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGC TTCCGCCACCCGTACGCACAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTAC TGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGAGGCCCAGTCGCCCGAGGGCGTC AATCGCCACCTCGCCGACGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCAGG GAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTG GCGGACATGAACACCGCCGTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAG CTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCAGCTGATGGACGCCGTGCAGCTG CCCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACGCC GTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGAC GACGAAAAGCCAACAACAGAAGCAGATGCCAAGCTGCAAACCGTGAGCGATCACGTCACG GTCGAACCGGAAGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACATTGAACAAGTTTAA ACCGGTTCACGTCAAAATCCAACGAACGAGTCGATCGAACCGGGCAGATTAAGCCGGTTC TCGATGGGTTTCGTCACTCCCGCACCATATGCCACTTCCAAGCGGCAACCGGTCCGAGTG GCCGAGTCAGAGTGGGGAATAAAAAAGCAATCGCCGTAAAACCTTGATCACTGTTGGCTC AGAGGAAAAGTTGACACATGCAGATAGCATCAAGGAGAAATGGGGAATAAAAAAGCTCAC TTATCATAAAGTTGTCAATACGGCATTGTGGCTTTCATGCCATGAATGTAGGCACGTATA GCGTCAAATCCATGTTAGTGCGTTGTTATTTTTAATTATACCAGATAACCAGAATGTTAT TTGATCTGATCCCATATAGGAGCAGGAAAGAAAGTTCAGGGCCTGTCATATATGGTCGTC ATGCACGCACCATTTTCTTTCTCTAACCACAGTACAAAGGCTACCAGA



consensusID : consensus_12188#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2022
fasta sequence
                              [TAGGGAGGTAGATCACATTTGGCCAGAAGCCTTTGTCACGTTCCTCTCTTTGGAAACTAGCTTTGGTAGCTTGCTTTACTCTTCCTAGGAATATATCTTTGTGTCCAGAAAATAATTGCCACAGAAACGAAAGCAACGAGAGCAGAGGTCAACCCAGTCGTACTTACCAAAGGCGAGCGAATTGAAGCAAATTTAGGCCGCATTTTCGTTGCGTACATAGAGAATCGAGGCTTACAATAGGGACCCATCTGGTGTGTGCAGCGGCGCTCGTGTACCGGTCGCCATCAGCATGGACGCCGCCGCGAGGGAAGCGCAGGTGCAGGGCAGTCTGGAATGGCGGGTGACGGTGCCGGAGGGCTCGTCGGTGACGGTGGAGCACGAGGCCGGCGTCGCCGAGAGGGCGTGGGCGTGGGTGGTGAGGATGCTGGTCGCGGTCAGGGCGGCGGTGGCCGGCTTCGCCAGGAAGGTGTGGAAGATCGGCGCCGACGATCCCCGGAGAGCGGTGCACAGCCTCAAAGTCGGCCTGGCTCTCACCCTCGTCTCCATCGTCTACTACACCAGGCCCGTGTACGACGGCGTCGGCGGCAATGCCATGTGGGCCGTCATGACGGTTGTCGTGGTCTTCGAGTACACCGTCGGTGGATGCATGTACAAGGGATTCAACAGAGCCGTCGCGACGGCGAGCGCCGGGCTGCTCGCGCTAGGCGTGAACTGGGTGGCGGACAAATCCGGCGACAAGCTCGAGCCGTTCATCCTCAGCGGCTCCCTGTTTTTACTGGCTGCGGCGGCCACCTTCTCGCGGTTCATACCAACGGTGAAGGCGCGGTTCGACTACGGCGTGACCATCTTCATCCTGACGTTCAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACCAGCTGCTGGACCTGGCGCAGCAGCGGATGTCCACCATCGGCATCGGCATCGTCATCTGCCTCGCCGTCTGCGTCGTCATCTGGCCGGTGTGGGCCGGCCAGGAGCTGCACCTCCTCACGGTGCGCAACATGGAGAAGCTCGCCGGCGCCGTCGAGGGCTGCGTCGAGGACTACTTCGCGGCGAAGCCCGCCGCGGCCAAGTCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCGGAGGAC-TCGCAGGCCAACCTGGCGCGGTGGGAGCCGCCGCACGGGCGGTTCGGCTTCCGCCACCCGTACGCGCAGTACACCAAGGTGGGCGCCGCGATGCGCCACTGCGCGTACTGCGTCGAGGCGCTCAACAGCTGCGTCCGCGCCGAGGTCCAGGCGCCCGAGCACGTCAAGCGGCTGCTCGGCGACGTGTGCACGCGGCTGGCCTCGCAGTGCGCGCGGGTTCTCAGGGAGGCGTCCACCTCGGTCGCCGCCATGACCAGCCCCAAGACGCTGGACTTCGCCGTGGCGGACATGAACACGGCCGTGCACGAGCTTCAGGGCGACCTGCGCGCGCTCCCGCCCGTCCTGGCCTTGGAACCGGCGGCGGAGATGTCGCTGATGGACGCGATGCCGCTCTTCACCGTGGCGTCGCTGCTGATAGAGATATCGGCGAGGATCGAGGGCGTCGTCGACGCCGTCGAGACGCTGGCCAGCCTCGCCAGCTTCAAGCAGGTGGAGGATGATGACGACAAGAAGGGACAAACCGAGATGAAAGTGCACCCGCTGAACGTGCCGGATGATCACGACGCGTCGACACATGAAAGCCAGACTACAACGAAGCACCCTGAACAGGTCTAAACTTTAAAAACGTCCATCAAATCAAACCGCACAAAATCAACCAGCGGGACGAGTCAGACCGGAAGAACACACGAATACATGATTGAATCTAAACTGGCTGAGCCACCGCTCTTTGCTAGCTTCTTCTGGTGATTAACAGAATAACTCTATCGATTTACAGTGGAGAGAATCTTGGCAACTTCATACCACGGCTTACACGACGAATAAAACCGGCTTACCACTGTCATAAAAGTCGGCATGTATCGTCGCATTCATGATGTACTACT]

[+] EMBL AK108963             [TAGGGAGGTAGATCACATTTGGCCAGAAGCCTTTGTCACGTTCCTCTCTTTGGAAACTAGCTTTGGTAGCTTGCTTTACTCTTCCTAGGAATATATCTTTGTGTCCAGAAAATAATTGCCACAGAAACGAAAGCAACGAGAGCAGAGGTCAACCCAGTCGTACTTACCAAAGGCGAGCGAATTGAAGCAAATTTAGGCCGCATTTTCGTTGCGTACATAGAGAATCGAGGCTTACAATAGGGACCCATCTGGTGTGTGCAGCGGCGCTCGTGTACCGGTCGCCATCAGCATGGACGCCGCCGCGAGGGAAGCGCAGGTGCAGGGCAGTCTGGAATGGCGGGTGACGGTGCCGGAGGGCTCGTCGGTGACGGTGGAGCACGAGGCCGGCGTCGCCGAGAGGGCGTGGGCGTGGGTGGTGAGGATGCTGGTCGCGGTCAGGGCGGCGGTGGCCGGCTTCGCCAGGAAGGTGTGGAAGATCGGCGCCGACGATCCCCGGAGAGCGGTGCACAGCCTCAAAGTCGGCCTGGCTCTCACCCTCGTCTCCATCGTCTACTACACCAGGCCCGTGTACGACGGCGTCGGCGGCAATGCCATGTGGGCCGTCATGACGGTTGTCGTGGTCTTCGAGTACACCGTCGGTGGATGCATGTACAAGGGATTCAACAGAGCCGTCGCGACGGCGAGCGCCGGGCTGCTCGCGCTAGGCGTGAACTGGGTGGCGGACAAATCCGGCGACAAGCTCGAGCCGTTCATCCTCAGCGGCTCCCTGTTTTTACTGGCTGCGGCGGCCACCTTCTCGCGGTTCATACCAACGGTGAAGGCGCGGTTCGACTACGGCGTGACCATCTTCATCCTGACGTTCAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACCAGCTGCTGGACCTGGCGCAGCAGCGGATGTCCACCATCGGCATCGGCATCGTCATCTGCCTCGCCGTCTGCGTCGTCATCTGGCCGGTGTGGGCCGGCCAGGAGCTGCACCTCCTCACGGTGCGCAACATGGAGAAGCTCGCCGGCGCCGTCGAGGGCTGCGTCGAGGACTACTTCGCGGCGAAGCCCGCCGCGGCCAAGTCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCGGAGGAC TCGCAGGCCAACCTGGCGCGGTGGGAGCCGCCGCACGGGCGGTTCGGCTTCCGCCACCCGTACGCGCAGTACACCAAGGTGGGCGCCGCGATGCGCCACTGCGCGTACTGCGTCGAGGCGCTCAACAGCTGCGTCCGCGCCGAGGTCCAGGCGCCCGAGCACGTCAAGCGGCTGCTCGGCGACGTGTGCACGCGGCTGGCCTCGCAGTGCGCGCGGGTTCTCAGGGAGGCGTCCACCTCGGTCGCCGCCATGACCAGCCCCAAGACGCTGGACTTCGCCGTGGCGGACATGAACACGGCCGTGCACGAGCTTCAGGGCGACCTGCGCGCGCTCCCGCCCGTCCTGGCCTTGGAACCGGCGGCGGAGATGTCGCTGATGGACGCGATGCCGCTCTTCACCGTGGCGTCGCTGCTGATAGAGATATCGGCGAGGATCGAGGGCGTCGTCGACGCCGTCGAGACGCTGGCCAGCCTCGCCAGCTTCAAGCAGGTGGAGGATGATGACGACAAGAAGGGACAAACCGAGATGAAAGTGCACCCGCTGAACGTGCCGGATGATCACGACGCGTCGACACATGAAAGCCAGACTACAACGAAGCACCCTGAACAGGTCTAAACTTTAAAAACGTCCATCAAATCAAACCGCACAAAATCAACCAGCGGGACGAGTCAGACCGGAAGAACACACGAATACATGATTGAATCTAAACTGGCTGAGCCACCGCTCTTTGCTAGCTTCTTCTGGTGATTAACAGAATAACTCTATCGATTTACAGTGGAGAGAATCTTGGCAACTTCATACCACGGCTTACACGACGAATAAAACCGGCTTACCACTGTCATAAAAGTCGGCATGTATCGTCGCATTCATGATGTACTACT]
[+] EMBL AK111202             [                                                                                                                                                                                                    GCCGCATTTTCGTTGCGTACATAGAGAATCGAGGCTTACAATAGGGACCCATCTGGTGTGTGCAGCGGCGCTCGTGTACCGGTCGCCATCAGCATGGACGCCGCCGCGAGGGAAGCGCAGGTGCAGGGCAGTCTGGAATGGCGGGTGACGGTGCCGGAGGGCTCGTCGGTGACGGTGGAGCACGAGGCCGGCGTCGCCGAGAGGGCGTGGGCGTGGGTGGTGAGGATGCTGGTCGCGGTCAGGGCGGCGGTGGCCGGCTTCGCCAGGAAGGTGTGGAAGATCGGCGCCGACGATCCCCGGAGAGCGGTGCACAGCCTCAAAGTCGGCCTGGCTCTCACCCTCGTCTCCATCGTCTACTACACCAGGCCCGTGTACGACGGCGTCGGCGGCAATGCCATGTGGGCCGTCATGACGGTTGTCGTGGTCTTCGAGTGCACCGTCGGTGGATGCATGTACAAGGGATTCAACAGAGCCGTCGCGACGGCGAGCGCCGGGCTGCTCGCGCTCGGCGTGAACTGGGTGGCGGACAAATCCGGCGACAAGCTCGAGCCGTTCATCCTCAGCGGCTCCCTGTTTTTACTGGCTGCGGCGGCCACCTTCTCGCGGTTCATACCAACGGTGAAGGCGCGGTTCGACTACGGCGTGACCATCTTCATCCTGACGTTCAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACCAGCTGCTGGACCTGGCGCAGCAGCGGATGTCCACCATCGGCATCGGCATCGTCATCTGCCTCGCCGTCTGCGTCGTCATCTGGCCGGTGTGGGCCGGCCAGGAGCTGCACCTCCTCACGGTGCGCAACATGGAGAAGCTCGCCGGCGCCGTCGAGGGCTGCGTCGTGGACTACTTCGCGGCGAAGCCCGCCGCGGCCAAGTCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCGGAGGAC TCGCAGGCCAACCTGGCGCGGTGGGAGCCGCCGCACGGGCGGTTCGGCTTCCGCCACCCGTACGCGCAGTACACCAAGGTGGGCGCCGCGATGCGCCACTGCGCGTACTGCGTCGAGGCGCTCAACAGCTGCGTCCGCGCCGAGGTCCAGGCGCCCGAGCACGTCAAGCGGCTGCTCGGCGACGTGTGCACGCGGCTGGCCTCGCAGTGCGCGCGGGTTCTCAGGGAGGCGTCCACCTCGGTCGCCGCCATGACCAGCCCCAAGACGCTGGACTTCGCCGTGGCGGACATGAACACGGCCGTGCACGAGCTTCAGGGCGACCTGCGCGCGCTCCCGCCCGTCCTGGCCTTGGAACCGGCGGCGGAGATGTCGCTGATGGACGCGATGCCGCTCTTCACCGTGGCGTCGCTGCTGATAGAGATATCGGCGAGGATCGAGGGCGTCGTCGACGCCGTCGAGACGCTGGCCAGCCTCGCCAGCTTCAAGCAGGTGGAGGATGATGACGACAAGAAGGGACAAACCGAGATGAAAGTGCACCCGCTGAACGTGCCGGATGATCACGACGCGTCGACACATGAAAGCCAGACTACAACGAAGCACCCTGAACAGGTCTAAACTTTAAAAACGTCCATCAAATCAAACCGCACAAAATCAACCAGCGGGACGAGTCAGACCGGAAGAACACACGAATACATGATTGAATCTAAACTGGCTGAGCCACCGCTCTTTGCTAGCTTCTTCTGGTGATTAACAGAATAACTCTATCGATTTACAGTGGAGAGAATCTTGGCAACTTCATACCACGGCTTACACGACGAATAAAACCGGCTTACCACTGTCATAAAAGTCGGCATGTATCGTCGCATTCATGATGTACTACT]
[+] EMBL AU064622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACTACGGCGTGACCATCTTCATCCTGACGTTCAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACCAGCTGCTGGACCTGGCGCA NAGCGGATGTCCACCATCGGCATCGGCATCGTCATCTGCCTCGCCGTCTGCGTCGTCATCTGGCCGGTGTGGGCCGGCCAGGAGCTGCACCTCCTCACGGTGCGCAACATGGAGAAGCTCGCCGGCGCCGTCGAGGGCTGCGTCGAGGACTACTTCGCGGCGAANCGC CCGCGGCCAAGTCGGAGGGGTACAAGTGCGTGCTCAACTTCAAGGCGTCGGAGGACTTTGNAGGCCAACCTTGCGCGGTGGGAGCCGCNGAACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU165327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACTACGGCGTGACCATCTTNATCCTGACGTTNAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACCAGCTGCTGGACCTGGCGCA NAGCGGATGTCCACCATCGGCATCGGCATCGTAATCTGCNTCGCCGTCTGCTTCGTCATCTGGCCGGTNTGGGCCGGCCAGGAGCTGCACCTCCTNACGGTGCGCAACATGGAGAAGCTCGCCGGCGCCGTCAAGGGCTNCNTCGAGGACTACTTCGCGGCGAA  CCGCCGCGGCCAAGTNGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C98480               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTAAACTTTAAAANCGTCCATCAAATCAAACCGCACAAAATCAACCAGCGGGACGAGTCAGACCGGAAGAACACACGAATACATGATTGAATCTAAACTGGCTGAGCCACCGCTCTTTGCTAGCTTCTTCTGGTGATTAACAGAATAACTCTATCGATTTACAGTGGAGAGAATCTTGGCAACTTCATACCACGGCTTACACGACGAATAAAACCGGCTTACCACTGTCATAAAAGTCGGCATGTATCGTCGCATTCATGATGTACTACT]
[+] EMBL AU094869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTTGCTAGCTTCTTCTGGTGATTAACAGAATAATTCTATCGATTTACAGTGGAGAGAATCTTGGCAACTTCATACCACGGCTTACACGACGAATAAAACCGGCTTACCACTGTCATAAAAGTCGGNATGTATCGTCGTATTCATGATGTACTACT]


>consensus_12188#1 TAGGGAGGTAGATCACATTTGGCCAGAAGCCTTTGTCACGTTCCTCTCTTTGGAAACTAG CTTTGGTAGCTTGCTTTACTCTTCCTAGGAATATATCTTTGTGTCCAGAAAATAATTGCC ACAGAAACGAAAGCAACGAGAGCAGAGGTCAACCCAGTCGTACTTACCAAAGGCGAGCGA ATTGAAGCAAATTTAGGCCGCATTTTCGTTGCGTACATAGAGAATCGAGGCTTACAATAG GGACCCATCTGGTGTGTGCAGCGGCGCTCGTGTACCGGTCGCCATCAGCATGGACGCCGC CGCGAGGGAAGCGCAGGTGCAGGGCAGTCTGGAATGGCGGGTGACGGTGCCGGAGGGCTC GTCGGTGACGGTGGAGCACGAGGCCGGCGTCGCCGAGAGGGCGTGGGCGTGGGTGGTGAG GATGCTGGTCGCGGTCAGGGCGGCGGTGGCCGGCTTCGCCAGGAAGGTGTGGAAGATCGG CGCCGACGATCCCCGGAGAGCGGTGCACAGCCTCAAAGTCGGCCTGGCTCTCACCCTCGT CTCCATCGTCTACTACACCAGGCCCGTGTACGACGGCGTCGGCGGCAATGCCATGTGGGC CGTCATGACGGTTGTCGTGGTCTTCGAGTACACCGTCGGTGGATGCATGTACAAGGGATT CAACAGAGCCGTCGCGACGGCGAGCGCCGGGCTGCTCGCGCTAGGCGTGAACTGGGTGGC GGACAAATCCGGCGACAAGCTCGAGCCGTTCATCCTCAGCGGCTCCCTGTTTTTACTGGC TGCGGCGGCCACCTTCTCGCGGTTCATACCAACGGTGAAGGCGCGGTTCGACTACGGCGT GACCATCTTCATCCTGACGTTCAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACCAGCT GCTGGACCTGGCGCAGCAGCGGATGTCCACCATCGGCATCGGCATCGTCATCTGCCTCGC CGTCTGCGTCGTCATCTGGCCGGTGTGGGCCGGCCAGGAGCTGCACCTCCTCACGGTGCG CAACATGGAGAAGCTCGCCGGCGCCGTCGAGGGCTGCGTCGAGGACTACTTCGCGGCGAA GCCCGCCGCGGCCAAGTCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCGGAGGA CTCGCAGGCCAACCTGGCGCGGTGGGAGCCGCCGCACGGGCGGTTCGGCTTCCGCCACCC GTACGCGCAGTACACCAAGGTGGGCGCCGCGATGCGCCACTGCGCGTACTGCGTCGAGGC GCTCAACAGCTGCGTCCGCGCCGAGGTCCAGGCGCCCGAGCACGTCAAGCGGCTGCTCGG CGACGTGTGCACGCGGCTGGCCTCGCAGTGCGCGCGGGTTCTCAGGGAGGCGTCCACCTC GGTCGCCGCCATGACCAGCCCCAAGACGCTGGACTTCGCCGTGGCGGACATGAACACGGC CGTGCACGAGCTTCAGGGCGACCTGCGCGCGCTCCCGCCCGTCCTGGCCTTGGAACCGGC GGCGGAGATGTCGCTGATGGACGCGATGCCGCTCTTCACCGTGGCGTCGCTGCTGATAGA GATATCGGCGAGGATCGAGGGCGTCGTCGACGCCGTCGAGACGCTGGCCAGCCTCGCCAG CTTCAAGCAGGTGGAGGATGATGACGACAAGAAGGGACAAACCGAGATGAAAGTGCACCC GCTGAACGTGCCGGATGATCACGACGCGTCGACACATGAAAGCCAGACTACAACGAAGCA CCCTGAACAGGTCTAAACTTTAAAAACGTCCATCAAATCAAACCGCACAAAATCAACCAG CGGGACGAGTCAGACCGGAAGAACACACGAATACATGATTGAATCTAAACTGGCTGAGCC ACCGCTCTTTGCTAGCTTCTTCTGGTGATTAACAGAATAACTCTATCGATTTACAGTGGA GAGAATCTTGGCAACTTCATACCACGGCTTACACGACGAATAAAACCGGCTTACCACTGT CATAAAAGTCGGCATGTATCGTCGCATTCATGATGTACTACT



consensusID : consensus_12188#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1505
fasta sequence
                              [CGTGCTTCACTTGTAGCTATCTACTCCATCTATCAAGCCCCCAGCTCAAAGACGTACGTACGCGGCGCTAGCTA-TATATACTAATTAGCTACATCGATCACTAGCTATAGCTAGCTCGATCGATAACTTATCATCGTACTTCAAGGCGATCATGCAATCTGCTGCCGTGGAGACGACGCCGGCGGCG-GCGGCGGCGGCGGAGAACGGCGGCCAAGTGGTCGTCGTCGTCGGCGGGGGGTGGGTGGATGGATGCTGGGCGCGGGTGCGAGCGGCGGTGGAGGTGGCCGGGAGGTGGGTGGGCGGGCTGGCGAGGAAGGTGGGCGGGATCGCGGCGGACGACCCGAGGAGGGTGGCGCACTCGCTCAAGGTCGGGCTGGCGCTGACGCTGGTGTCCGTGCTCTACTACGTGACGCCGCTTTTCAAGGGGTTCGGGGTCTCCACGCTCTGGGCCGTGCTCACCGTCGTCGTCGTCATGGAGTACACCGTCGGTGGCACGCTGAGCAAAGGGTTGAACAGGGCCTTCGCGACGCTGGTGGCTGGGTTCATCGCCGTCGGGGCGCATCAGGTGGCTAACCGGTGCGGCGCACAGGGAGAGCCCATACTCCTCGCCGTCTTCGTCTTCCTACTAGCGTCGGCGGCGACGTTCTCGCGGTTCATACCGGAGATAAAGGCGAGGTACGACTACGGGGTGACCATCTTCATCCTGACCTTCAGCCTGGTGGCCGTGTCGAGCTACCGGGTAGAGGAGCTCATCCAGCTCGCGCACCAGCGCTTCTCCACCATCGTCGTCGGCGTCGCCACCTGCCTCTGCACCACCATCTTCGTCATGCCCGTCTGGGCCGGCGAGGACCTCCACAAGCTCGCCGCCGGCAACCTCGACAAGCTGGCCGACTTCCTTGAAGGAATGGAAACCGAATGCTTTGGAGAAAGCGCTACGAGTGAGAGTTTGGAGGGCAAAGCCTTTCTCCAAGCGTACAAGAGCATACTTAATTCGAAGGCCACTGAAGACTCTCTGTGCAACTTTGCCAGATGGGAGCCTGGTCATGGAAAATTCAGTTTCAAACACCCATGGAGCCAATACCAGAAGATTGGAGCTCTTTCTCGCCAGTGCGCTTCTTCCATGGAGGCTATGGCTTCCTATGTCATCACACTCACAAAATCTCAGTATCCTGAAGCCAATCCTGAGCTGTCCTTCAAAGTACGAACAGCATGCAGTGAGATGAGCTCACACTCTGCTCAGGCACTCAGAGAGCTCTCGGCAGCACTTCGAACAATGACCGTACCATCTACAACCTCCATGTCTGCAGCCATCAAAGCTGCCAAAACACTCAGGAGCGAGCTATCAGAGGATAAAGCTCTGCTGCAAGTGATGCATGTGGCAGTTACTGCATCACTTCTTTCAGACTTGGTTACACAAGTAAAGAAAATTGCAGAATCTGTCGATAACCTGGCACGACTTGCCTGCTTCAAAGTCCCTGAAAAATCTCAGAAAGAAGTGGCTATCA]

[+] EMBL AK063428             [CGTGCTTCACTTGTAGCTATCTACTCCATCTATCAAGCCCCCAGCTCAAAGACGTACGTACGCGGCGCTAGCTA TATATACTAATTAGCTACATCGATCACTAGCTATAGCTAGCTCGATCGATAACTTATCATCGTACTTCAAGGCGATCATGCAATCTGCTGCCGTGGAGACGACGCCGGCGGCG GCGGCGGCGGCGGAGAACGGCGGCCAAGTGGTCGTCGTCGTCGGCGGGGGGTGGGTGGATGGATGCTGGGCGCGGGTGCGAGCGGCGGTGGAGGTGGCCGGGAGGTGGGTGGGCGGGCTGGCGAGGAAGGTGGGCGGGATCGCGGCGGACGACCCGAGGAGGGTGGCGCACTCGCTCAAGGTCGGGCTGGCGCTGACGCTGGTGTCCGTGCTCTACTACGTGACGCCGCTTTTCAAGGGGTTCGGGGTCTCCACGCTCTGGGCCGTGCTCACCGTCGTCGTCGTCATGGAGTACACCGTCGGTGGCACGCTGAGCAAAGGGTTGAACAGGGCCTTCGCGACGCTGGTGGCTGGGTTCATCGCCGTCGGGGCGCATCAGGTGGCTAACCGGTGCGGCGCACAGGGAGAGCCCATACTCCTCGCCGTCTTCGTCTTCCTACTAGCGTCGGCGGCGACGTTCTCGCGGTTCATACCGGAGATAAAGGCGAGGTACGACTACGGGGTGACCATCTTCATCCTGACCTTCAGCCTGGTGGCCGTGTCGAGCTACCGGGTAGAGGAGCTCATCCAGCTCGCGCACCAGCGCTTCTCCACCATCGTCGTCGGCGTCGCCACCTGCCTCTGCACCACCATCTTCGTCATGCCCGTCTGGGCCGGCGAGGACCTCCACAAGCTCGCCGCCGGCAACCTCGACAAGCTGGCCGACTTCCTTGAAGGAATGGAAACCGAATGCTTTGGAGAAAGCGCTACGAGTGAGAGTTTGGAGGGCAAAGCCTTTCTCCAAGCGTACAAGAGCATACTTAATTCGAAGGCCACTGAAGACTCTCTGTGCAACTTTGCCAGATGGGAGCCTGGTCATGGAAAATTCAGTTTCAAACACCCATGGAGCCAATACCAGAAGATTGGAGCTCTTTCTCGCCAGTGCGCTTCTTCCATGGAGGCTATGGCTTCCTATGTCATCACACTCACAAAATCTCAGTATCCTGAAGCCAATCCTGAGCTGTCCTTCAAAGTACGAACAGCATGCAGTGAGATGAGCTCACACTCTGCTCAGGCACTCAGAGAGCTCTCGGCAGCACTTCGAACAATGACCGTACCATCTACAACCTCCATGTCTGCAGCCATCAAAGCTGCCAAAACACTCAGGAGCGAGCTATCAGAGGATAAAGCTCTGCTGCAAGTGATGCATGTGGCAGTTACTGCATCACTTCTTTCAGACTTGGTTACACAAGTAAAGAAAATTGCAGAATCTGTCGATAACCTGGCACGACTTGCCTGCTTCAAAGTCCCTGAAAAATCTCAGAAAGAAGTGGCTATCA]
[+] EMBL C72671               [                            TCTATCAAGCCCCCAGCTCAAAGACGTACGTACGCGGCGCTA CTATTATATACTAATTAGCTACATCGATCACTAGCTATAGCTAGCTCGATCGATAACTTATCATCGTACTTCAAGGCGATCATGCAATCTGCTGCCGTGGAGACGACGCCGGCGGNGNGCG  GACGGCGGAGAACGGCGGCCAAGTGGTCGTCGTCGTCGGCGGGGGGTGGGTGGATGGATGCTGGGCGCGGGTGCGAGCGGCGGTGGAGGTGGCCGGGAGGTGGGTGGGCGGGCTGGCGAGGAAGGTGGGCGGGATCGCGGCGGACGACCCGAGGAGGGTGGCGCACTCGCTCAAGGTCGGGCTGGCGCTGACGCTGGTGTCCGTGCTCTACTACGTGACGCCGCTTTTCAAGGGGTTCGGGGTCTCCACGCTCTGGGCCGTGCTCACCGTCGTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU101157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATCCTGAAGCCAATCCTGAGCTGTCCTTCAAAGTACGAACAGCATGCAGTGAGATGAGCTCACACTCTGCTCAGGCACTCAGAGAGCTCTCGGCAGCACTTCGAACAATGACCGTACCATCTACAACCTCCATGTCTGCAGCCATCAAAGCTGCCAAAACACTCAGGAGCGAGCTATCAGAGGATAAAGCTCTGCTGCAAGTGATGCATGTGGCAGTTACTGCATCACTTCTTTCAGACTTGGTTACACAAGTAAAGAAAATTGCAGAATCTGTCGATAACCTGGCACGACTTGCCTGCTTCAAAGTCCCTGAAAAATCTCAGAAAGAAGTGGCTATCA]


>consensus_12188#2 CGTGCTTCACTTGTAGCTATCTACTCCATCTATCAAGCCCCCAGCTCAAAGACGTACGTA CGCGGCGCTAGCTATATATACTAATTAGCTACATCGATCACTAGCTATAGCTAGCTCGAT CGATAACTTATCATCGTACTTCAAGGCGATCATGCAATCTGCTGCCGTGGAGACGACGCC GGCGGCGGCGGCGGCGGCGGAGAACGGCGGCCAAGTGGTCGTCGTCGTCGGCGGGGGGTG GGTGGATGGATGCTGGGCGCGGGTGCGAGCGGCGGTGGAGGTGGCCGGGAGGTGGGTGGG CGGGCTGGCGAGGAAGGTGGGCGGGATCGCGGCGGACGACCCGAGGAGGGTGGCGCACTC GCTCAAGGTCGGGCTGGCGCTGACGCTGGTGTCCGTGCTCTACTACGTGACGCCGCTTTT CAAGGGGTTCGGGGTCTCCACGCTCTGGGCCGTGCTCACCGTCGTCGTCGTCATGGAGTA CACCGTCGGTGGCACGCTGAGCAAAGGGTTGAACAGGGCCTTCGCGACGCTGGTGGCTGG GTTCATCGCCGTCGGGGCGCATCAGGTGGCTAACCGGTGCGGCGCACAGGGAGAGCCCAT ACTCCTCGCCGTCTTCGTCTTCCTACTAGCGTCGGCGGCGACGTTCTCGCGGTTCATACC GGAGATAAAGGCGAGGTACGACTACGGGGTGACCATCTTCATCCTGACCTTCAGCCTGGT GGCCGTGTCGAGCTACCGGGTAGAGGAGCTCATCCAGCTCGCGCACCAGCGCTTCTCCAC CATCGTCGTCGGCGTCGCCACCTGCCTCTGCACCACCATCTTCGTCATGCCCGTCTGGGC CGGCGAGGACCTCCACAAGCTCGCCGCCGGCAACCTCGACAAGCTGGCCGACTTCCTTGA AGGAATGGAAACCGAATGCTTTGGAGAAAGCGCTACGAGTGAGAGTTTGGAGGGCAAAGC CTTTCTCCAAGCGTACAAGAGCATACTTAATTCGAAGGCCACTGAAGACTCTCTGTGCAA CTTTGCCAGATGGGAGCCTGGTCATGGAAAATTCAGTTTCAAACACCCATGGAGCCAATA CCAGAAGATTGGAGCTCTTTCTCGCCAGTGCGCTTCTTCCATGGAGGCTATGGCTTCCTA TGTCATCACACTCACAAAATCTCAGTATCCTGAAGCCAATCCTGAGCTGTCCTTCAAAGT ACGAACAGCATGCAGTGAGATGAGCTCACACTCTGCTCAGGCACTCAGAGAGCTCTCGGC AGCACTTCGAACAATGACCGTACCATCTACAACCTCCATGTCTGCAGCCATCAAAGCTGC CAAAACACTCAGGAGCGAGCTATCAGAGGATAAAGCTCTGCTGCAAGTGATGCATGTGGC AGTTACTGCATCACTTCTTTCAGACTTGGTTACACAAGTAAAGAAAATTGCAGAATCTGT CGATAACCTGGCACGACTTGCCTGCTTCAAAGTCCCTGAAAAATCTCAGAAAGAAGTGGC TATCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12188#0      ------------------------------------------------------------
consensus_12188#1      TAGGGAGGTAGATCACATTTGGCCAGAAGCCTTTGTCACGTTCCTCTCTTTGGAAACTAG 60
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      -----------------------------AGCATCAGCTTATTACCA----ATCTTTTTC 27
consensus_12188#1      CTTTGGTAGCTTGCTTTACTCTTCCTAGGAATATATCTTTGTGTCCAGAAAATAATTGCC 120
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      ATTC---CCCTCTCTTGGAACGTGCTGGTCTCCTCGCTTCTACACTCTCTTGATCAGCTC 84
consensus_12188#1      ACAGAAACGAAAGCAACGAGAGCAGAGGTCAACCCAGTCGTACTTACCAAAGGCGAGCGA 180
consensus_12188#2      ---------CGTGCTTCACTTGTAGCTATCTACTCCATCTATCAAGCCC----CCAGCTC 47
                                    *       *      **  * *  *    *   *        ***  

consensus_12188#0      TCACCACTATGTACACTTGATCGTCATTTGCCACAAGTTAAAAT-TGATACAGAGCA-AC 142
consensus_12188#1      AT----TGAAGCAAATTTAGGCCGCATTTTCGTTGCGTACATAG-AGAATCGAGGCTTAC 235
consensus_12188#2      AA------AGACGTACGTACGCGGCGCTAGCTATATATACTAATTAGCTACATCGATCAC 101
                               *     *  *   *  *  *  *      *    *   *   *   *   **

consensus_12188#0      ACAAAGAGCTAAACTAGGGGCAGTAACGCGGTAGTTGTACTCGATCATATCGATCCATGG 202
consensus_12188#1      AATAGGGACCCATCTGGTGTGTGCAGCGGCGCTCGTGTACCGGTCGCCATCAG--CATGG 293
consensus_12188#2      TAGCTATAGCTAGCTCG-ATCGATAAC-TTATCATCGTACTTCAAGGCGATCATGCA-AT 158
                                  * ** *       * *         ****               **   

consensus_12188#0      CTGCGGTGGCGAATG--GCGGTGCTGCG-------CCGGAGTGGCGGGTGACGGTGCCGG 253
consensus_12188#1      ACGCCGCCGCGAGGGAAGCGCAGGTGCAGGGCAGTCTGGAATGGCGGGTGACGGTGCCGG 353
consensus_12188#2      CTGCTGCCGTGGAGACGACGCCGGCGGCGG-----CGGCGGCGGCGGAGAACGGCGGCCA 213
                         ** *  * *       **  *  *         * *    *****   **** * *  

consensus_12188#0      AGGGCGCGACGGTGACGGTGGAGCGCGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGTGT 313
consensus_12188#1      AGGGCTCGTCGGTGACGGTGGAGCACGAGGCCGGC-GTCGCCGAGAGG--------GCGT 404
consensus_12188#2      AGTGGTCGTCGTCGTCGGCGGGGGGTG-GGTGGATGGATGCTGG------------GCGC 260
                       ** *  ** **  * *** ** *   * **  *   *  ** *             * * 

consensus_12188#0      GGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGGCGTCCGGCCTCGCCG 373
consensus_12188#1      GGGCGTGGGTGGTGAGGA--TGC-TGGTCGCGGTCAGGGCGGCGGTGGCCGGCTTCGCCA 461
consensus_12188#2      GGGTGCGAGCGGCGGTG---------GAGGTGGCCGGGAGGTGGGTGGGCGGGCTGGCGA 311
                       *** * *   *  *            *  * *  * **     ** *  ***  * **  

consensus_12188#0      GGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCG 433
consensus_12188#1      GGAAGGTGTGGAAGATCGGCGCCGACGATCCCCGGAGAGCGGTGCACAGCCTCAAAGTCG 521
consensus_12188#2      GGAAGGTGGGCGGGATCGCGGCGGACGACCCGAGGAGGGTGGCGCACTCGCTCAAGGTCG 371
                       **   **  *   *****  ** ***** **  **** * ** ****    **** ****

consensus_12188#0      GCCTCGCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCG 493
consensus_12188#1      GCCTGGCTCTCACCCTCGTCTCCATCGTCTACTACACCAGGCCCGTGTACGACGGCGTCG 581
consensus_12188#2      GGCTGGCGCTGACGCTGGTGTCCGTGCTCTACTACGTGACGCCGCTTTTCAAGGGGTTCG 431
                       * ** ** **  * ** ** *** *  ********   * ***  * * * * **  ***

consensus_12188#0      GCGGCGCCGCCATGTGGGCCGTCATGACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTG 553
consensus_12188#1      GCGGCAATGCCATGTGGGCCGTCATGACGGTTGTCGTGGTCTTCGAGTACACCGTCGGTG 641
consensus_12188#2      GGGTCTCCACGCTCTGGGCCGTGCTCACCGTCGTCGTCGTCATGGAGTACACCGTCGGTG 491
                       * * *    *  * ********  * ** ** ***** *** * **** ****** ****

consensus_12188#0      GCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCGCCGGGGCGGTCGCGC 613
consensus_12188#1      GATGCATGTACAAGGGATTCAACAGAGCCGTCGCGACGGCGAGCGCCGGGCTGCTCGCGC 701
consensus_12188#2      GCACGCTGAGCAAAGGGTTGAACAGGGCCTTCGCGACGCTGGTGGCTGGGTTCATCGCCG 551
                       *     **  *** ** ** *** * ***   ******  *   ** ***    ****  

consensus_12188#0      TCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCG 673
consensus_12188#1      TAGGCGTGAACTGGGTGGCGGACAAATCCGGCGACAAGCTCGAGCCGTTCATCCTCAGCG 761
consensus_12188#2      TCGGGGCGCATCAGGTGGCTAACCGGTGCGGCGCACAGGGAGAGCCCATACTCCTCGCCG 611
                       * ** * * *   * * **   *   * *****   **   *****  *  *** *  **

consensus_12188#0      GCTCGGTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGG 733
consensus_12188#1      GCTCCCTGTTTTTACTGGCTGCGGCGGCCACCTTCTCGCGGTTCATACCAACGGTGAAGG 821
consensus_12188#2      TCTTCGTCTTCCTACTAGCGTCGGCGGCGACGTTCTCGCGGTTCATACCGGAGATAAAGG 671
                        **   * **  * ** **  ******* ** *****************   * * ****

consensus_12188#0      CGCGGTTCGACTACGGGGTGACCATCTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGG 793
consensus_12188#1      CGCGGTTCGACTACGGCGTGACCATCTTCATCCTGACGTTCAGCCTCGTCGCCGTGTCGG 881
consensus_12188#2      CGAGGTACGACTACGGGGTGACCATCTTCATCCTGACCTTCAGCCTGGTGGCCGTGTCGA 731
                       ** *** ********* ******************** * ****** ** ********* 

consensus_12188#0      GGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCTCCACCATCGCCATCG 853
consensus_12188#1      GGTACCGCGTCGACCAGCTGCTGGACCTGGCGCAGCAGCGGATGTCCACCATCGGCATCG 941
consensus_12188#2      GCTACCGGGTAGAGGAGCTCATCCAGCTCGCGCACCAGCGCTTCTCCACCATCGTCGTCG 791
                       * ***** ** **   ***  *     * ***** *****  * ********** * ***

consensus_12188#0      GCATCTTCATCTGCCTCGCCGTCTGCTTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGC 913
consensus_12188#1      GCATCGTCATCTGCCTCGCCGTCTGCGTCGTCATCTGGCCGGTGTGGGCCGGCCAGGAGC 1001
consensus_12188#2      GCGTCGCCACCTGCCTCTGCACCACCATCTTCGTCATGCCCGTCTGGGCCGGCGAGGACC 851
                       ** **  ** *******  *  *  * *  ** **   ** ** ********  **** *

consensus_12188#0      TGCACCGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCG 973
consensus_12188#1      TGCACCTCCTCACGGTGCGCAACATGGAGAAGCTCGCCGGCGCCGTCGAGGGCTGCGTCG 1061
consensus_12188#2      TCCACAAGCTCGCCGCCGGCAACCTCGACAAGCTGGCCGACTTCCTTGAAGGAATGGAAA 911
                       * ***   *** * *   ***** * ** ***** **** *  * * ** *     *   

consensus_12188#0      AGGGCTACTTCGTCGCGGGAGAGGAGGAGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGG 1033
consensus_12188#1      AGGACTACTTCG------------------CGGCGAAGCCCG--------CCGCGGCCAA 1095
consensus_12188#2      CCGAATGCTTTG--------------GAGAAAGCGCTACGAGTGAGAGTTTGGAGGGCAA 957
                         *  * *** *                    ***   *  *          * ** *  

consensus_12188#0      CGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCCGAGGACG 1093
consensus_12188#1      -------------GTCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCGGAGGACT 1142
consensus_12188#2      AGCCT-------TTCTCCAAGCGTACAAGAGCATACTTAATTCGAAGGCCACTGAAGACT 1010
                                         * * ******* ** * ** ** ** *****  * ** *** 

consensus_12188#0      CGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGT 1153
consensus_12188#1      CGCAGGCCAACCTGGCGCGGTGGGAGCCGCCGCACGGGCGGTTCGGCTTCCGCCACCCGT 1202
consensus_12188#2      CTCTGTGCAACTTTGCCAGATGGGAGCCTGGTCATGGAAAATTCAGTTTCAAACACCCAT 1070
                       * * *   *** * **  * ********    ** **    *** * ***   ***** *

consensus_12188#0      ACGCACAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCC 1213
consensus_12188#1      ACGCGCAGTACACCAAGGTGGGCGCCGCGATGCGCCACTGCGCGTACTGCGTCGAGGCGC 1262
consensus_12188#2      GGAGCCAATACCAGAAGATTGGAGCTCTTTCTCGCCAGTGCGCTTCTTCCATGGAGGCTA 1130
                            ** ***       * ** **       ***** ***** *  * * * *****  

consensus_12188#0      TGAGCGGCTGCATCCGCTCCGCGGAGGCCCAGTCGCCCGAGGGCGTCAATCGCCACCTCG 1273
consensus_12188#1      TCAACAGCTGCGTCCGCGCCG---AGGTCCAGGCGCCCGAGCACGTCAAGCGGCTGCTCG 1319
consensus_12188#2      TGGCTTCCTATGTCATCAC-----ACTCACAAAATCTCAGTATCCTGAAGCCAATCCTGA 1185
                       *      **   **  * *     *    **    * *     * * ** *     **  

consensus_12188#0      CCGACGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCAGGGAGGCCTCGAGCT 1333
consensus_12188#1      GCGACGTGTGCACGCGGCTGGCCTCGCAGTGCGCGCGGGTTCTCAGGGAGGCGTCCACCT 1379
consensus_12188#2      GC----TGTCC-----------TTCAAAGTACG-AACAGCATGCAGTGAGATG---AGCT 1226
                        *     ** *             *   ** **     *    *** ***      * **

consensus_12188#0      CCGTCGCCGCGATGACGACGCCGTCCCGGGGC-CTCGACTTCGCCGTGGCGGACATGAAC 1392
consensus_12188#1      CGGTCGCCGCCATGAC----CAGCCCCAAGACGCTGGACTTCGCCGTGGCGGACATGAAC 1435
consensus_12188#2      CACACTCTGCTCAGGC-----ACTCAGAGAGCTCTCGGCAGCACTT---CGAACAATGAC 1278
                       *   * * **   * *        *      * ** * *  * *     ** ***   **

consensus_12188#0      ACCGCCGTTCAGGAGCTCCAGAGCG--AGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCG 1450
consensus_12188#1      ACGGCCGTGCACGAGCTTCAGGGCG--ACCTGCGCGCGCTCCCGCCCGTCCTGGCCTT-- 1491
consensus_12188#2      CGTACCATCTACAACCTCCATGTCTGCAGCCATCAAAGCTGCCAAAACACTCAGGAGC-- 1336
                           ** *  *  * ** **   *   *         *** **          *      

consensus_12188#0      CCGCCGGGGAGCCGGCCGCGGCGCAGCAGCTGATGGACGCCGTGCAGCTGCCCACGGTGA 1510
consensus_12188#1      -------GGAACCGGCGGCGGAGATGTCGCTGATGGACGCGATGCCGCTCTTCACCGTGG 1544
consensus_12188#2      --------GAGCTATCAGAGGATAAAGCTCTGCTGCAAGTGATGCATGTGGCAGTTACTG 1388
                               ** *   * * **        *** ** * *   ***   *           

consensus_12188#0      CCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACGCCGTCGACACGC 1570
consensus_12188#1      CGTCGCTGCTGATAGAGATATCGGCGAGGATCGAGGGCGTCGTCGACGCCGTCGAGACGC 1604
consensus_12188#2      CATCACTTCTTTCAGACTTGGTTACACAAGTAAAGAAAATTGCAGAATCTGTCGATAACC 1448
                       * ** ** **    **  *     *     *  **    * *  **  * ***** *  *

consensus_12188#0      TCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGACGACGAAAAGC 1630
consensus_12188#1      TGGCCAGCCTCGCCAGCTTCAAGCAGGTGGAGGATGATGACGACAAGAAGG--GACAAAC 1662
consensus_12188#2      TGGCACGACTTGCCTGCTTCAAAGTCCCTGAAAAATCTCAGAAAGAAGTGGCTATCA--- 1505
                       * **    ** **    ****        **  *     *  *  *    *     *   

consensus_12188#0      CAACAACAGAAGCAGATGCCAAGCTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGG 1690
consensus_12188#1      CGA-GATGAAAGTGCACCC---GCTGAACGTGCCGGATGATCACGACGCG-TCGACACAT 1717
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      AAGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACATTGAACAAGTTTAAACCGGTTCAC 1750
consensus_12188#1      GAAAGCCAG--------ACT---ACAACGAAGCACCCTGAACAGGTCTAAAC---TTTAA 1763
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      GTCAAAATCCAACGAACGAGTCGATCGAACCGGGCAGATTAAGCCGGTTCTCGATGGGTT 1810
consensus_12188#1      A--AACGTCCATCAAA--------TCAAACCGCACAAAATCAACCAG--CGGGACGAGTC 1811
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      TCGTCACTCCCGCACCATATGCCACTTCCAAGCGGCAACCGGTCCGAGTGGCCGAGTCAG 1870
consensus_12188#1      AGACCGGAAGAACACACGAATACATGATTGAATCTAAACTGG-CTGAGCCACCGCTCTTT 1870
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      AGTGGGGAATAAAAAAGCAATCGCCGTAAAACCTTGATCACTGTTGGCTCAGAGGAAAAG 1930
consensus_12188#1      GCTAGCTTCTTCTG--GTGATTAACAGAATAACTCTATCGAT-TTACAGTGGAGAGAATC 1927
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      TTGACACATGCAGATAGCATCAAGGAGAAATGGGGAATAAAAA-AGCTCACT--TATCAT 1987
consensus_12188#1      TTGGCAACTTCATACCACGGCTT----ACACGACGAATAAAACCGGCTTACCACTGTCAT 1983
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      AAAGTTGTCAATACGGCATTGTGGCTTTCATGCCATGAATGTAGGCACGTATAGCGTCAA 2047
consensus_12188#1      AAAA--GTCGGCATG-TATCGTCGCATTCATGATGTACTACT------------------ 2022
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      ATCCATGTTAGTGCGTTGTTATTTTTAATTATACCAGATAACCAGAATGTTATTTGATCT 2107
consensus_12188#1      ------------------------------------------------------------
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      GATCCCATATAGGAGCAGGAAAGAAAGTTCAGGGCCTGTCATATATGGTCGTCATGCACG 2167
consensus_12188#1      ------------------------------------------------------------
consensus_12188#2      ------------------------------------------------------------
                                                                                   

consensus_12188#0      CACCATTTTCTTTCTCTAACCACAGTACAAAGGCTACCAGA 2208
consensus_12188#1      -----------------------------------------
consensus_12188#2      -----------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)