cluster # 12194

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Oryza sativa
cluster # 12194 cluster # 12194 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12194#0 length = 1072 sequences # 10
consensusID : consensus_12194#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1072
fasta sequence
                              [TTGGGCTCGCGCGGCGCCGTCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACACTGCTCACGCCTCTCTCTCTCTCTGCTCCCAAATCTGCGTGGGAGAGAGAGAGAGAGAGAAATCCAGTGGGGGGAGGGATTGGTCTCTGGAGGGGATCTAGCAGCAGCAGCAGCAGCAGCCATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTGCAAATGGAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGA-GGCTTAGGC-AACAAATTGTCAATTTGCAAGGCACGCGGGCAC-AATACGTGGAGTTGCTACTCATA-CACAGGCAATGTACGCAGGCACTTCAATATCTGCAGGAATGAAAGGTGCAAGCAAAGCAATGGCAGCAATGAATAAGCAAA-TGGAACCAACAAAACAGATCAAGGTTATGAGAGAATTCCAGAAACAATCAAATCAGTTGGACATGACGCTTGAAATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAACCAGGTTC-TTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCACTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTAGGCAAACAACAAGATTTAAATAACATAATTGAACCTTCGGATTTTCTATGGAAGGATGAGCATTTG-TCCAATTTTGGAAGATATGGGAAAACTCTTTTGATTAAAAAA]

[+] EMBL AK103237             [TTGGGCTCGCGCGGCGCCGTCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACACTGCTCACGCCTCTCTCTCTCTCTGCTCCCAAATCTGCGTGGGAGAGAGAGAGAGAGAGAAATCCAGTGGGGGGAGGGATTGGTCTCTGGAGGGGATCTAGCAGCAGCAGCAGCAGCAGCCATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTGCAAATGGAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGA GGCTTAGGC AACAAATTGTCAATTTGCAAGGCACGCGGGCACAAATACGTGGAGTTGCTACTCATA CACAGGCAATGTACGCAGGCACTTCAATATCTGCAGGAATGAAAGGTGCAAGCAAAGCAATGGCAGCAATGAATAAGCAAA TGGAACCAACAAAACAGATCAAGGTTATGAGAGAATTCCAGAAACAATCAAATCAGTTGGACATGACGCTTGAAATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAACCAGGTTC TTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCACTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTAGGCAAACAACAAGATTTAAATAACATAATTGAACCTTCGGA                                                                    ]
[+] EMBL CA882877             [  GGGCTCGCGCGGCGCCGTCCCCCCTCTCTCTCTCTCTCTCTC     C CTCTCTACACTGCTCACGCCTCTCTCTCTCTCTGCTCCCAAATCTGCGTGG      GAGAGAGAGAGAAATCCAGTGGGGGGAGGGATTGGTCTCTGGAGGGGATCTAGCAGCAGCAGCAGCAGCAGCCATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTGCAAATGGAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGA GGCTTAGGC AACAAATTGTCAATTTGCAAGGCACGCGGGCACAAATACGTGGAGTTGCTACTCATA CA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU058391             [                                            TCTCTCTCTCTCTACACTGCTCACGCNTCTCTCTCTCTCTGCTCCCAAATCTGCGTGGGAGAGAGAGAGAGAGAGAAATCCAGTGGGGGGAGGGATTGGTCTCTGGAGGGGATCTAGCAGCAGCAGCAGCAGCAGCCATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTGCAAATGGAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGA GGCTTAGGC AACAAATTGTCAATTTGCAAGGCACGCGGGCAC AATACGTGGAGTTGCTACTCATA CACAGGC ATGTACGCA GCACTTC ATATCTGCA GAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSC619               [                                                                             TCTCTCTGCTCCCAAATCTGCGTGGNAGAGAGAGAGAGAGAGAAATCCAGTGGGGGGAGGGATTGGNCTCTGGAGGGGNTCTAGCAGCAGCAGCAGCAGCAGCCATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTGCAAATGGAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGAGGGCTTAGGCAAACAAATTGTCAATTTTCAAGGCACGCGGGCAC AATACGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU094428             [                                                                                                                                                                                                                                                                                                                                                                                    nCTTGTGA GGCTTAGNC AACAAATTGTCAATTTGCAAGGCACGCGGGCAC AATACGTGGAGTTGCTACTCATACCACAGGCAATGTACGCAGGCACTTCAATATCTGCAGGAATGAAAGGTGCAAGCAAAGCAATGGCAGCAATGAATAAGCAAA TGGAACCAACAAAACAGATCAAGGTTATGAGAGAATTCCAGAAACAATCAAATCAGTTGGACATGACGCTTGAAATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAACCAGGTTC TTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCACTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTAGGCAAACAACAAGATTTAAATAACATAATTGAA CTTCGGATTTTCTATGGAAGGATGAGCATTTG TCCAATTTTGGAAGATATGGGAAAACTCTTTTGATTAAAAA ]
[+] EMBL BI796754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAATAAGCAAATTGGAACC  CCAAACAGATC AGGTTATGAGAGAATTCCAGAAAC ATCAAATCAGTTGGACATGACGCTTGAAATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAA CAGGTTCTTTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAAT CCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCCCTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTA GCAAACAACAAGATTTAAATAACATAATTGAACCTTCGGATTTTCTATGGAAGGATGAGCATTTGATGCAAaaaaaa                               ]
[+] EMBL AU166166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAACCAGGTTC TTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCACTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTAGGCAAACAACAAGATTTAAATAACATAATTGAACCTTCGGATTTTCTATGGAAGGATGAGCATTTG TCCAATTTTGGAAGATATGGGAAAACTCTTTTGATTAAAAAA]
[+] EMBL OSR00191A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCACTTNGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTAGGCAAACAACAAGATTTAAATAACATAATTGAACCTTCGGATTTTCTATGGAGGGATGAGCATTTG TCCAATTTTGG                               ]
[+] EMBL AU095412             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCACTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTATTGTAGGCAAACAACAAGATTTAAATAACATAATTGAA CTTCGGATTTTCTATGGAAGGATGAGCATTTG TCCAATTTTGGAAGAnaaa                       ]
[+] EMBL AA750806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCCCTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAATTCTATA                                                                                                                                                                      ]




>consensus_12194#0
TTGGGCTCGCGCGGCGCCGTCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACA
CTGCTCACGCCTCTCTCTCTCTCTGCTCCCAAATCTGCGTGGGAGAGAGAGAGAGAGAGA
AATCCAGTGGGGGGAGGGATTGGTCTCTGGAGGGGATCTAGCAGCAGCAGCAGCAGCAGC
CATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGA
GATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTGCAAATGGAGGAGAA
GAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAAT
CCTAGCTCGGCAACTTGTGAGGCTTAGGCAACAAATTGTCAATTTGCAAGGCACGCGGGC
ACAATACGTGGAGTTGCTACTCATACACAGGCAATGTACGCAGGCACTTCAATATCTGCA
GGAATGAAAGGTGCAAGCAAAGCAATGGCAGCAATGAATAAGCAAATGGAACCAACAAAA
CAGATCAAGGTTATGAGAGAATTCCAGAAACAATCAAATCAGTTGGACATGACGCTTGAA
ATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAA
GAACTTACTAACCAGGTTCTTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCA
GCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAAT
GCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAG
AGGAGACTGGCTTCACTTCGCCGCATCTGAGCAGCTGATAAATATATAGTGCATCTATAA
TTCTATATGTAAATTTGTTTCACTCAACATAGCTTGTCTGAATATGTGCGAGTAGAGTAT
TGTAGGCAAACAACAAGATTTAAATAACATAATTGAACCTTCGGATTTTCTATGGAAGGA
TGAGCATTTGTCCAATTTTGGAAGATATGGGAAAACTCTTTTGATTAAAAAA
clustalw multiple alignements is not computed in this case