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Oryza sativa
cluster # 12195 cluster # 12195       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12195#0 length = 1702 sequences # 9  
consensus_12195#1 length = 959 sequences # 1  

consensusID : consensus_12195#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1702
fasta sequence
                              [CGTGGGTCCCACCGGGCTCCGTCGCCACGTACGCGGCCGGCTCTCCCTATACAAGCGCCACGTCGCCGGCGAGCCGCCGCCCCTCCACCGTCCCCGGCGGCGTATATTCCCCCCCGTGGCGCGCTCCCATGGCTTCCTACTGCTACTACGGCAACACCTCCAACCCTAACCCTAACCCTAACCCTAGCCCTGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCGCGCCCGTCCAGATAGGCCCCTCCCCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCACCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCCCGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACCTCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACCCCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTATTCCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACGGCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCTTCTCCGTCCAGTCCGTGGTCGGCGGCGAGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGG-CGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTAT-CCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATTGTTCTTGCTT-CGCTTGATGGATTCGGGAAGATTTGC-GACGCAGTCGAAGTGGCTGGAACGAA-TGTTCTGTCCACATCATCAAC-TGTGACTACCGGTCTTGTATCCCACAAA-TATGGGGAGAAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTC-AAGATTCGGCAGG-CC-TTGAACCCGAAGAGCGTCC-TAAAGCCAACC--TCAC-TCGCC-AAG-TC-TA-CCA-TC-AAAGCAG-CAGC-TGC-TGACTA-TCG-TGC-AAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTT-GGAAC-G-TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT-GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA-TGGGTGTGCTGCACTACTGCTACT-GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACGC-TGATGATGTACTACCAC-TTTTGTGCTGAATGATGCAATGTACGGAAATCTGTGGTGTTGCAAAAAAAATTTCTGCGTCCTGAGGTGGAGTAAATCTTTCAGAGCTGTCTGCTAAAAAAAAAAAA]

[+] EMBL AK071437             [CGTGGGTCCCACCGGGCTCCGTCGCCACGTACGCGGCCGGCTCTCCCTATACAAGCGCCACGTCGCCGGCGAGCCGCCGCCCCTCCACCGTCCCCGGCGGCGTATATTCCCCCCCGTGGCGCGCTCCCATGGCTTCCTACTGCTACTACGGCAACACCTCCAACCCTAACCCTAACCCTAACCCTAGCCCTGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCGCGCCCGTCCAGATAGGCCCCTCCCCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCACCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCCCGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACCTCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACCCCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTATTCCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACGGCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCTTCTCCGTCCAGTCCGTGGTCGGCGGCGAGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGG CGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTAT CCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATTGTTCTTGCTT CGCTTGATGGATTCGGGAAGATTTGC GACGCAGTCGAAGTGGCTGGAACGAA TGTTCTGTCCACATCATCAAC TGTGACTACCGGTCTTGTATCCCACAAA TATGGGGAGAAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTC AAGATTCGGCAGG CC TTGAACCCGAAGAGCGTCC TAAAGCCAACC  TCAC TCGCC AAG TC TA CCA TC AAAGCAG CAGC TGC TGACTA TCG TGC AAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTT GGAAC G TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA TGGGTGTGCTGCACTACTGCTACT GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACGC TGATGATGTACTACCAC TTTTGTGCTGAATGATGCAATGTACGGAAAT                                                                            ]
[+] EMBL AU166589             [                                                                                                                                                                                                                                                                                                                                                                                CAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACCTCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACCCCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTATTCCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTNTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI118859             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAGGTTCGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGG CGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAARATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTATCCCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGTTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGARAGATTGTTCTTGCTTCCGCTTGATGGATTCCGGAAGATTTGC GACGCATTCGAAGTGGCTGGAACGAATTGTTCTGTCCACATCATCAAC TGTGACTACCGGTCTTGTATCCCACAAATTATGGCGAGAAAGCTGCGGCTGCGACCAATGAAGGAATGGATGCARCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAAGATTCGGCAGGCCC TTGAACCTGAAGAGCGTCT TAAAGCCAACC  TCAC TCGCCAAAG TC TACCCATTCAAAAGCAG CAGCTTGCTTGACTA TCGTTGCAAAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCGGTGTT GGAACGG TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA TGGGTGTGCTGCACTACTGCTACT GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACG                                                                                                                               ]
[+] EMBL BI118858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAGGTTCGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGGCCGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAAATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTAT CTGRAGTTGTAAAGGTTACT GCTATTTTACAAACTCAATAGTTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATTG TCTTGCTT CGCTTGATGGATTC GGAAGATTTGC GACGCAGTCGAAGT GCTGGAACGAA TGTTCTGTCCACATCATCAACTTGTGACTACCGTTCTTGTATCCCACAAA TAT GGGAGAAAGCTTCGGCTTCGACCAATAAAGGAATGAATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAAGATTCGGCAGG CCTTTGAACCCAAAAAGCGTCCTTAAAGCCAACCCTTCACTTGGCC AAGTTCTTC CCATTC AAACCAGCCAGT TGC TTACTATTCG TGC AAAACAAAAGAAATAGTTCGTCCTCAACGATCAACCCGGTGTT GGAAC GTTTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA TGGGTGTGCTGCACTACTGCTACT GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACG                                                                                                                               ]
[+] EMBL AU068951             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGG CGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTAT CCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA765186             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aggacgagaCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTAT CCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATTGTTCTTGCTT CGCTTGATGGATTCGGGAAGATTTGCGGACGCAGTCGAAGTGGCTGGAACGAA TGTTCTGTCCACATCATCAAC TGTGACTACCGGTCTTGTATCCCACAAA TATGGGGAGAAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTC AAGATTCGGCAGG CC TTGAACCCGAAGAGCGTCC TAAAGCCAACC  TCAC TCGCC AAG TC TA CCA TC AAAGCAG CAGC TGC TGACTA TCG TGC AAAGCAAAAG AATAGTTCGTCCTCAACGATCAACCCAGTGTTGGGAAC G TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTTGGCAGATGTCTTCTCTTGGTTTCTTTTTTTCACGAGTCATTGGGTGTGCTGCACTACTGCTACTGGTTGCTTGTAATATATGTGCTGAAAAACCAAAGGCAACTCCTGAACGCTTGATGATGTACTACCACTTTTTGNGCTG                                                                                                 ]
[+] EMBL AU166588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGCCAGCATGGGCAGTGTTC AAGATTCGGCAGG CC TTGAACCCGAAGAGCGTCC TAAAGCCAACC  TCAC TCGCC AAG TC TA CCA TC AAAGCAG CAGC TGC TGACTA TCG TGC AAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTT GGAAC G TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA TGGGTGTGCTGCACTACTGCTACT GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACGC TGATGATGTACTACCAC TTTTGTGCTGAATGATGCAATGTACGGAAATCTGTGGTGTTGCAAAAAAAA                                                        ]
[+] EMBL AU197837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCAATCGGGACAGCATGGGCAGTGTTC AAGATTCGGCAGG CC TTGAACCCGAAGAGCGTCC TAAAGCCAACC  TCAC TCGCC AAG TC TA CCA TC AAAGCAG CAGC TGC TGACTA TCG TGC AAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTT GGAAC G TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA TGGGTGTGCTGCACTACTGCTACT GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACGC TGATGATGTACTACCAC TTTTGTGCTGAATGATGCAATGTACGGAAATCTGTGGTGTTGCAAAATTTGTTTCTGCGTCCTGAGGTGGAGTAAATCTTTCAGAGCTGTCTGCTAAAAAAAAAAAA]
[+] EMBL CF329764             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gagtaga AAAGCAG CAGC TGC TGACTA TCG TGC AAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTT GGAAC G TTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTT GCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCA TGGGTGTGCTGCACTACTGCTACT GTTGCTTGTAATATATGTGCTGAAAAACCAAAAGCAACTCCTGAACGC TGATGATGTACTACCAC TTTTGTGCTGAATGATGC ATGTACGGAAATC                                                                           ]


>consensus_12195#0 CGTGGGTCCCACCGGGCTCCGTCGCCACGTACGCGGCCGGCTCTCCCTATACAAGCGCCA CGTCGCCGGCGAGCCGCCGCCCCTCCACCGTCCCCGGCGGCGTATATTCCCCCCCGTGGC GCGCTCCCATGGCTTCCTACTGCTACTACGGCAACACCTCCAACCCTAACCCTAACCCTA ACCCTAGCCCTGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCG CGCCCGTCCAGATAGGCCCCTCCCCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCA CCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCC CGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACC TCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACC CCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTATT CCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACG GCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCT TCTCCGTCCAGTCCGTGGTCGGCGGCGAGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGG AGGCGGCGGCGTACTGGACGGCGGTGGCGCCCAATGTGGAGGAGTACGGCGGGAAGGTGG CAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAAC TGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCG ACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGA CAAAAATGTCTGAGAAAGTGGCAACTGGAATACTATCCGGAGTTGTAAAGGTTACTGGCT ATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTG GAGAGATTGTTCTTGCTTCGCTTGATGGATTCGGGAAGATTTGCGACGCAGTCGAAGTGG CTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCACAAAT ATGGGGAGAAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCG GGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGC CAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAGCAAA AGAAATAGTTCGTCCTCAACGATCAACCCAGTGTTGGAACGTTCCTGACTAATAGAAGCT CTGCCCCAATCCATCCCAGCTAGTTTTTGCAGATGTCTTCTCTTGTTTTCTTTTTTTCAC GAGTCATGGGTGTGCTGCACTACTGCTACTGTTGCTTGTAATATATGTGCTGAAAAACCA AAAGCAACTCCTGAACGCTGATGATGTACTACCACTTTTGTGCTGAATGATGCAATGTAC GGAAATCTGTGGTGTTGCAAAAAAAATTTCTGCGTCCTGAGGTGGAGTAAATCTTTCAGA GCTGTCTGCTAAAAAAAAAAAA



consensusID : consensus_12195#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 959
fasta sequence
                              [CGACGCAGTCGAAGTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCACAAGTACGAGTTATTCTCCTTTCCACTCATTTCTCCTCTCTTTATATGTAGATTTCTACTACTTCTTACGTGTCCTACATCCATATCTGAAGCACATCATATGCACATCCTTTTTCTCTAATTCTTCCTTATGTAGTGGAATTGATCAAATGATCAATAGAGATTCTTCTTAAGCTCTTACATTGGGTCTGCTCTGCAGATATGGGGAGAAAGCTGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCGGTGTTGGAACGTTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTTGCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCATGGGTGTGCTGCACTACTGCTACTGGTGCTTGTATATATGTGCTGAAAAACCAAAGGCACCTCCTGACCGCTGTGATGACTACCACTTTTGTGCTGAAGATGCATGGACGGAATCTGTGGGGTGCAAAAAAAAACCGTTAATAAAAAAACCTGAGGGGGGGCCGGTCCCAATCTGCCTTAGGGGGCTATTACCGCCCTCCTGGCCGGCGTTACACAGTGGCGGGAAACCTTGGGTTCCCAATAATGGCTTGAAAAGTCCCTTCGAGATTGGGATATAGGAAAGGCCACAGTAGCCGTCCACAGTGGTAAAGCAATGGGAGGGCACCCCCTGAGGGTGAAACGGGGGAGGGTGGCTCAGAGTGGCGGCCTTGGAACCCCCA]

[+] EMBL BE039807             [CGACGCAGTCGAAGTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCACAAGTACGAGTTATTCTCCTTTCCACTCATTTCTCCTCTCTTTATATGTAGATTTCTACTACTTCTTACGTGTCCTACATCCATATCTGAAGCACATCATATGCACATCCTTTTTCTCTAATTCTTCCTTATGTAGTGGAATTGATCAAATGATCAATAGAGATTCTTCTTAAGCTCTTACATTGGGTCTGCTCTGCAGATATGGGGAGAAAGCTGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCGGTGTTGGAACGTTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTTGCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCATGGGTGTGCTGCACTACTGCTACTGGTGCTTGTATATATGTGCTGAAAAACCAAAGGCACCTCCTGACCGCTGTGATGACTACCACTTTTGTGCTGAAGATGCATGGACGGAATCTGTGGGGTGCAAAAAAAAACCGTTAATAAAAAAACCTGAGGGGGGGCCGGTCCCAATCTGCCTTAGGGGGCTATTACCGCCCTCCTGGCCGGCGTTACACAGTGGCGGGAAACCTTGGGTTCCCAATAATGGCTTGAAAAGTCCCTTCGAGATTGGGATATAGGAAAGGCCACAGTAGCCGTCCACAGTGGTAAAGCAATGGGAGGGCACCCCCTGAGGGTGAAACGGGGGAGGGTGGCTCAGAGTGGCGGCCTTGGAACCCCCA]


>consensus_12195#1 CGACGCAGTCGAAGTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGG TCTTGTATCCCACAAGTACGAGTTATTCTCCTTTCCACTCATTTCTCCTCTCTTTATATG TAGATTTCTACTACTTCTTACGTGTCCTACATCCATATCTGAAGCACATCATATGCACAT CCTTTTTCTCTAATTCTTCCTTATGTAGTGGAATTGATCAAATGATCAATAGAGATTCTT CTTAAGCTCTTACATTGGGTCTGCTCTGCAGATATGGGGAGAAAGCTGCGGCTGCGACCA ATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAGATTC GGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGCCAACCTCACTCGCCAAGTCTACCATCA AAGCAGCAGCTGCTGACTATCGTGCAAAGCAAAAGAAATAGTTCGTCCTCAACGATCAAC CCGGTGTTGGAACGTTCCTGACTAATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTT TGCAGATGTCTTCTCTTGTTTTCTTTTTTTCACGAGTCATGGGTGTGCTGCACTACTGCT ACTGGTGCTTGTATATATGTGCTGAAAAACCAAAGGCACCTCCTGACCGCTGTGATGACT ACCACTTTTGTGCTGAAGATGCATGGACGGAATCTGTGGGGTGCAAAAAAAAACCGTTAA TAAAAAAACCTGAGGGGGGGCCGGTCCCAATCTGCCTTAGGGGGCTATTACCGCCCTCCT GGCCGGCGTTACACAGTGGCGGGAAACCTTGGGTTCCCAATAATGGCTTGAAAAGTCCCT TCGAGATTGGGATATAGGAAAGGCCACAGTAGCCGTCCACAGTGGTAAAGCAATGGGAGG GCACCCCCTGAGGGTGAAACGGGGGAGGGTGGCTCAGAGTGGCGGCCTTGGAACCCCCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12195#0      CGTGGGTCCCACCGGGCTCCGTCGCCACGTACGCGGCCGGCTCTCCCTATACAAGCGCCA 60
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CGTCGCCGGCGAGCCGCCGCCCCTCCACCGTCCCCGGCGGCGTATATTCCCCCCCGTGGC 120
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      GCGCTCCCATGGCTTCCTACTGCTACTACGGCAACACCTCCAACCCTAACCCTAACCCTA 180
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      ACCCTAGCCCTGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCG 240
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CGCCCGTCCAGATAGGCCCCTCCCCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCA 300
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCC 360
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACC 420
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      TCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACC 480
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTATT 540
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACG 600
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      GCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCT 660
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      TCTCCGTCCAGTCCGTGGTCGGCGGCGAGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGG 720
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      AGGCGGCGGCGTACTGGACGGCGGTGGCGCCCAATGTGGAGGAGTACGGCGGGAAGGTGG 780
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      CAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAAC 840
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      TGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCG 900
consensus_12195#1      ------------------------------------------------------------
                                                                                   

consensus_12195#0      ACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGA 960
consensus_12195#1      ---------------------CGACGCAGTCGAAGTGGCTGGAACGAAT-GTTCTGTCCA 38
                                            *   *  ** ** * ** *  ** *  *     **   *

consensus_12195#0      CAAAAATGTCTGAGAAAGTGGCAACTGGAAT--ACTATCCGGAGTTGTAAAGGTTACTGG 1018
consensus_12195#1      CATCATCAACTGTGACTACCGGTCTTGTATCCCACAAGTACGAGTTATTCTCCTTTCCAC 98
                       **  *    *** **     *    ** *    ** *    ***** *     ** *   

consensus_12195#0      CTATTT-TACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTAC 1077
consensus_12195#1      TCATTTCTCCTCTCTTTATATGTAGATTTCTACTACTTCTTACGTGTCCTACATCCATAT 158
                         **** * *   **  ***  **  *    *         * **    **  *   ** 

consensus_12195#0      CTGGAG-AGATTGTTCTTGCTTCGCTTGATGGATTCGGGAAGATTTGCGACGCAGTCGAA 1136
consensus_12195#1      CTGAAGCACATCATATGCACATCCTTTT-----TCTCTAATTCTTCCTTATGTAGTGGAA 213
                       *** ** * **  *     * **  **      *     *   **    * * *** ***

consensus_12195#0      GTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCAC 1196
consensus_12195#1      TTGATCA-AATGATCAATAGAGATTCTTCTTAAGCTCTTACATTGGGTC---TGCTCTGC 269
                        **     ** **    *       * ** * * ** * **    ****   *   *  *

consensus_12195#0      AAATATGGGGAGAAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCA 1256
consensus_12195#1      AGATATGGGGAGAAAGCTGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCA 329
                       * *************** ******************************************

consensus_12195#0      ATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTA 1316
consensus_12195#1      ATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTA 389
                       ************************************************************

consensus_12195#0      AAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAG 1376
consensus_12195#1      AAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAG 449
                       ************************************************************

consensus_12195#0      CAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTTGGAACGTTCCTGACTAATAGA 1436
consensus_12195#1      CAAAAGAAATAGTTCGTCCTCAACGATCAACCCGGTGTTGGAACGTTCCTGACTAATAGA 509
                       ********************************* **************************

consensus_12195#0      AGCTCTGCCCCAATCCATCCCAGCTAGTTTTTGCAGATGTCTTCTCTTGTTTTCTTTTTT 1496
consensus_12195#1      AGCTCTGCCCCAATCCATCCCAGCTAGTTTTTGCAGATGTCTTCTCTTGTTTTCTTTTTT 569
                       ************************************************************

consensus_12195#0      TCACGAGTCATGGGTGTGCTGCACTACTGCTACTGTTGCTTGTAATATATGTGCTGAAAA 1556
consensus_12195#1      TCACGAGTCATGGGTGTGCTGCACTACTGCTACTGGTGCTTGTA-TATATGTGCTGAAAA 628
                       *********************************** ******** ***************

consensus_12195#0      ACCAAAAGCAACTCCTGAACGCTGATGATGTACTACCACTTTTGTGCTGAATGATGCAAT 1616
consensus_12195#1      ACCAAAGGCACCTCCTGACCGCTG-TGATG-ACTACCACTTTTGTGCTGAA-GATGCA-T 684
                       ****** *** ******* ***** ***** ******************** ****** *

consensus_12195#0      GTACGGAAATCTGTGGTGTTGCAAAAAAAATTTCTGC------GTCCTGAGGTGGAGTAA 1670
consensus_12195#1      GGACGGAA-TCTGTGGGGTGCAAAAAAAAACCGTTAATAAAAAAACCTGAGGGGGGGCCG 743
                       * ****** ******* **   ********    *          ******* ** *   

consensus_12195#0      ATCTTTCAGAGCTGTCTGCTAAAAAAAAAAAA---------------------------- 1702
consensus_12195#1      GTCCC---AATCTGCCT--TAGGGGGCTATTACCGCCCTCCTGGCCGGCGTTACACAGTG 798
                        **      * *** **  **       *  *                            

consensus_12195#0      ------------------------------------------------------------
consensus_12195#1      GCGGGAAACCTTGGGTTCCCAATAATGGCTTGAAAAGTCCCTTCGAGATTGGGATATAGG 858
                                                                                   

consensus_12195#0      ------------------------------------------------------------
consensus_12195#1      AAAGGCCACAGTAGCCGTCCACAGTGGTAAAGCAATGGGAGGGCACCCCCTGAGGGTGAA 918
                                                                                   

consensus_12195#0      -----------------------------------------
consensus_12195#1      ACGGGGGAGGGTGGCTCAGAGTGGCGGCCTTGGAACCCCCA 959
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)