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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12199#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1930 fasta sequence
[GCTCGACGCAACGCAGACGCAGGCGGCGGCTTCGGCCTACCTCGATCTCTCTCCCATGGCGCACTAGACCAAAACCCTAACCCTAGGTCCGCCTCCTCCGTCCGGCGGCAATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGG-AAGCCCGATGGCGTCTCGCGCGAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTGAAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCCTCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTTAGAGTTGTAAATGGTGCTCCACCCACTGGTGACTATCACTTTGCAAAATACAACAAGAAGGCGGATGTTCTCAAATACACCGATGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAACTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCAACTGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGTTACTCGTGCTCTTCTGATTGCTAGAGCTCGGTCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTCAATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAACAGCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGCTGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAATAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGACCAGACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGCAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACCACTGGAAGATTTATAGATGCACC-T--CCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGTTTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGATCCCAATGCAAACCTGAGCCTGGTTTCCATGTGTGGTTGGCGTTATAGCTAAAAAAAAAAAAAAA]
[+] EMBL AK071090 [GCTCGACGCAACGCAGACGCAGGCGGCGGCTTCGGCCTACCTCGATCTCTCTCCCATGGCGCACTAGACCAAAACCCTAACCCTAGGTCCGCCTCCTCCGTCCGGCGGCAATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGG AAGCCCGATGGCGTCTCGCGCGAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTGAAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCCTCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTTAGAGTTGTAAATGGTGCTCCACCCACTGGTGACTATCACTTTGCAAAATACAACAAGAAGGCGGATGTTCTCAAATACACCGATGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAACTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCAACTGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTTTTCTGTTACTCGTGCTCTTCTGATTGCTAGAGCTCGGTCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTCAATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAACAGCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGCTGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAATAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGACCAGACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGCAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACCACTGGAAGATTTATAGATGCACC T CCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGTTTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGATCCCAATGCAAACCTGAG ]
[+] EMBL AK060731 [ CTCGACGCAACGCAGACGCAGGCGGCGGCTTCGGCCTACCTCGATCTCTCTCCCATGGCGCACTAGACCAAAACCCTAACCCTAGGTCCGCCTCCTCCGTCCGGCGGCAATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGG AAGCCCGATGGCGTCTCGCGCGAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTGAAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCCTCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTTAGAGTTGTAAATGGTACTCCACCCACTGGTGACTATCACTTTGCAAAATACAACAAGAAGGCGGATGTTCTCAAATACACCGATGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAACTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCAACTGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGTTACTCGTGCTCTTCTGATTGCTAGAGCTCGGTCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTCAATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAACAGCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGCTGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAATAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCTTTAGAGTTATCAAAAGGGTTGACCAGACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGCAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACCACTGGAAGATTTATAGATGCACC T CCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGTTTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGCCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCG ]
[+] EMBL OSC104182 [ GGCTTCGGCCTACCTCGATCTCTCTCCCATGGCGCACTAGACCAAAACCCTAACCCTAGGTCCGCCTCCTCCGTCCGGCGGCAATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGGNAAGCCCGATGGCGTCTCGCGCGAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGCTCCACTNATNNCGACCATNGAGGCTTCGCACCTNAAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGG ]
[+] EMBL CB620774 [ AAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGGCCGGCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGG AAGCCCGATGGCGTCTCGCGCGAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGATCCACTCATGCCGACCATCTAGGCTTCGCACCTGAAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCCTCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTGAGAGTTGCAAATGGTGCTCCACCCACTGGTGACTATCACTTTGCAAAATACAACAAAAAGGCGGATGTTCTCGAATACACCGATGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAACTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGGTGATAGGTTCCCAACTGATCACAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGTTACTCGTGCTCTTCTGATTGATAGAGCTCGGTCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTCAATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTG ]
[+] EMBL AK058860 [ CTTCTCTCCCAGACAAAACAGCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGCTGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAATAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGACCAGACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGG ]
[-] EMBL CB678712 [ AAGACCTCGGGGTGAA TTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGCAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACCACTGGAAGATTTATAGATGCACC T CCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGTTTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGA ]
[-] EMBL CA761084 [ cgAGACAAGGGGGACCACAAGCGGAAGACTACTGGAAGATTTATAGATGCACC TCCCCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGTTTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCTATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGTCAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGATCCCAATGCAAACCTGAGCCTGGTTTCCATGTGTGGTTGGCGTTATAGCTAAAAAAAAAAAAAAA]
[-] EMBL CA761093 [ gacgagACAAGGGGAAGACTACTGGAAGATTAATAGATGCACCTT CCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGTTTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCTAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGATCCCAATGCAAAaaaa ]
[+] EMBL CA766127 [ AGGGGAAGA CTCTGGAAGATTTATAGATGCACC T CCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCCGATTGATGGGTTT AGATTGAGCTGCATAGAGTTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAACTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGATCCCAATGCAAACCTGAGCCTGGTT ]
[+] EMBL AU070653 [ CCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGGTAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGTACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGTGATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTGTTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTCAAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAACGAGGAACCGCGATCCCAATGCAAAaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||