|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12211#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1676 fasta sequence
[GGCCGGCAATAGAGAACAAACTCTCCACCTTCTAACCGCTTCCTTGCTTGCTGCCATAAGCCGCTGAGGTCACCACGGGCGGCCGACCACCACCGCTGCCGACCCATGTCGCCGTTCGCGGCCGCCCGGCTGACCATGCATGACCCTCGTCGGCCTCCTCGCGTAGGTCACTGCTGGCCTCCTTGCACCGTGGGCCACAGCCTCACGCCGCGTCAGTCGTGCCTCGCCAGCAATGGCCATGCATCGCTCCAGCTAGATCCATGTGCCGCCGGCCGCTGCCTTGCACACCACCGTCCGCCACCTCACACGCCGTCAGTTGCGTGGCCTCCAACACCTGCCGACGAGCCGTTGTTGTCGCCGGCTCTGACCAGATCTGGCAGGAGACACCAGATCCGGCCACGCGCCACCGGTCGCTAGAGCCCACTCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCACCCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCTTGTTTGATGCATACTCGTACAAATTAATATTCTTGCTGCGTTCATATATATATATGTCC]
[+] EMBL AK120102 [GGCCGGCAATAGAGAACAAACTCTCCACCTTCTAACCGCTTCCTTGCTTGCTGCCATAAGCCGCTGAGGTCACCACGGGCGGCCGACCACCACCGCTGCCGACCCATGTCGCCGTTCGCGGCCGCCCGGCTGACCATGCATGACCCTCGTCGGCCTCCTCGCGTAGGTCACTGCTGGCCTCCTTGCACCGTGGGCCACAGCCTCACGCCGCGTCAGTCGTGCCTCGCCAGCAATGGCCATGCATCGCTCCAGCTAGATCCATGTGCCGCCGGCCGCTGCCTTGCACACCACCGTCCGCCACCTCACACGCCGTCAGTTGCGTGGCCTCCAACACCTGCCGACGAGCCGTTGTTGTCGCCGGCTCTGACCAGATCTGGCAGGAGACACCAGATCCGGCCACGCGCCACCGGTCGCTAGAGCCCACTCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCACCCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCTTGTTTGATGCATACTCGTACAAATTAATATTCTTGCTGCGTTCATATATATATATGTCC]
[+] EMBL AK072065 [ GGCAATAGAGAACAAACTCTCCACCTTCTAACCGCTTCCTTGCTTGCTGCCATAAGCCGCTGAGGTCACCACGGGCGGCCGACCACCACCGCTGCCGACCCATGTCGCCGTTCGCGGCCGCCCGGCTGACCATGCATGACCCTCGTCGGCCTCCTCGCGTAGGTCACTGCTGGCCTCCTTGCACCGTGGGCCACAGCCTCACGCCGCGTCAGTCGTGCCTCGCCAGCAATGGCCATGCATCGCTCCAGCTAGATCCATGTGCCGCCGGCCGCTGCCTTGCACACCACCGTCCGCCACCTCACACGCCGTCAGTTGCGTGGCCTCCAACACCTGCCGACGAGCCGTTGTTGTCGCCGGCTCTGACCAGATCTGGCAGGAGACACCAGATCCGGCCACGCGCCACCGGTCGCTAGAGCCCACTCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCACCCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACA ]
[+] EMBL CB646741 [ CACCACGGGCGGCCGACCACCACCGCTGCCGACCCATGTCGCCGTTCGCGGCCGCCCGGCTGACCATGCATGACCCTCGTCGGCCTCCTCGCGTAGGTCACTGCTGGCCTCCTTGCACCGTGGGCCACAGCCTCACGCCGCGTCAGTCGTGCCTCGCCAGCAATGGCCATGCATCGCTCCAGCTAGATCCATGTGCCGCCGGCCGCTGCCTTGCACACCACCGTCCGCCACCTCACACGCCGTCAGTTGCGTGGCCTCCAACACCTGCCGACGAGCCGTTGTTGTCGCCGGCTCTGACCAGATCTGGCAGGAGACACCAGATCCGGCCACGCGCCACCGGTCGCTAGAGCCCACTCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCATGCGGCGGTGAGGTGGAGAAAGGAGGAG ]
[-] EMBL CB646742 [ tgGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCACCCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCTTG ]
[+] EMBL CF280846 [ TTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGGGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCAaaaa ]
[-] EMBL CF280847 [ GGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGGGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTAGAAACAAAGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTACCAAGGAAAAAAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCA ]
consensusID : consensus_12211#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1294 fasta sequence
[ATTAGAACTCGAGAAAATCCTAGACCTTAAGAAAAGGAATATGAAAAAGAACAAATTATACATAGACTTTGGGACTCATTATCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCACCCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCTTGTTTGAAAAAAAAAAAGA]
[+] EMBL CB657564 [ATTAGAACTCGAGAAAATCCTAGACCTTAAGAAAAGGAATATGAAAAAGAACAAATTATACATAGACTTTGGGACTCATTATCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAAT ]
[+] EMBL AK061560 [ TGGGACTCATTATCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCG ]
[+] EMBL AK061756 [ TGGGACTCATTATCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTCCCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGCTGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGGGAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAGCGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAATAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGAGCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGCATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCG ]
[-] EMBL CB657565 [ ATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATTGTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGTTGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCATGTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCGGCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGGCGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACTCCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTGGTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACTGGCTAGATAGGAGGGAATGGGCGGTGTTGGG TTTTTAGCTGCCATGTCGTTTTAAAATTTAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGACCATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATAGTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCACCCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCTTGTTTGAAAAAAAAAAAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12211#0 GGCCGGCAATAGAGAACAAACTCTCCACCTTCTAACCGCTTCCTTGCTTGCTGCCATAAG 60
consensus_12211#1 ------------------------------------------------------------
consensus_12211#0 CCGCTGAGGTCACCACGGGCGGCCGACCACCACCGCTGCCGACCCATGTCGCCGTTCGCG 120
consensus_12211#1 ------------------------------------------------------------
consensus_12211#0 GCCGCCCGGCTGACCATGCATGACCCTCGTCGGCCTCCTCGCGTAGGTCACTGCTGGCCT 180
consensus_12211#1 ------------------------------------------------------------
consensus_12211#0 CCTTGCACCGTGGGCCACAGCCTCACGCCGCGTCAGTCGTGCCTCGCCAGCAATGGCCAT 240
consensus_12211#1 ------------------------------------------------------------
consensus_12211#0 GCATCGCTCCAGCTAGATCCATGTGCCGCCGGCCGCTGCCTTGCACACCACCGTCCGCCA 300
consensus_12211#1 ------------------------------------------------------------
consensus_12211#0 CCTCACACGCCGTCAGTTGCGTGGCCTCCAACACCTGCCGACGAGCCGTTGTTGTCGCCG 360
consensus_12211#1 -------------------------------------ATTAGAACTCGAGAAAATCCTAG 23
* * ** ** *
consensus_12211#0 GCTCTGACCAGATCTGGCAGGAGACACCAGATCCGGCCACGCGCCACCGGTCGCTAGAGC 420
consensus_12211#1 ACCTTAAGAAAA----GGAATATGAAAAAGAACAAATTATACAT----AGACTTTGGGAC 75
* * * * * * * * * *** * * * * * * * *
consensus_12211#0 CCACT--CCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTC 478
consensus_12211#1 TCATTATCCCAAAGTGCCACCGGCTCTCCCTCTTTGCCTCCCGGTGCTGCGGCGGCTGTC 135
** * *****************************************************
consensus_12211#0 CCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGC 538
consensus_12211#1 CCCGAGGCCATGGGATCAGGCCTCAGACCTCCGGGGGGAGAGGGAAGGCCCCGCTGCCGC 195
************************************************************
consensus_12211#0 TGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGG 598
consensus_12211#1 TGTCCTTGCAGTTACATGGTTTTCCGGCGGCTTGCTCAGGCGGCGGTGAGGTGGAGAAGG 255
************************************************************
consensus_12211#0 GAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAG 658
consensus_12211#1 GAGGAGGTGGTGGGTGGCAGCAGGGGAGGGAGACATCGCCCATGTCGCCCAATCCTAGAG 315
************************************************************
consensus_12211#0 CGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAA 718
consensus_12211#1 CGACGCAGGGGCGCAAATGGATGGTCTCTCCTCTGTGCTCTTCTTCCCAGCATATCTCAA 375
************************************************************
consensus_12211#0 TAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGA 778
consensus_12211#1 TAATTCAGTTGCTGGGGAGTACCACATGCATCAGATGCCGTGTTGGCACATTGTAAGAGA 435
************************************************************
consensus_12211#0 GCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGC 838
consensus_12211#1 GCAAAGGAGCCTTGAGGTGGTGATTCAAATTGTGGTGCAAATTACACGTGGAGTTGAAGC 495
************************************************************
consensus_12211#0 ATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATT 898
consensus_12211#1 ATATGCATGGAGTAGCCATGGGCTAGCTAGCTAAGCTGCTTACCAGTGGATGGTAACATT 555
************************************************************
consensus_12211#0 GTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGT 958
consensus_12211#1 GTGAGCTACATGATTGACGACCTTGACTAGGACATTATCGCCTTCTCTTGCATACAGGGT 615
************************************************************
consensus_12211#0 TGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCAT 1018
consensus_12211#1 TGGCCCCGGGAACTTGCCATTGACAGTGAGGATAGGCTTGGTTGAGCAAAGCCGTGTCAT 675
************************************************************
consensus_12211#0 GTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCG 1078
consensus_12211#1 GTTCCGCATGACCACCTGCACAAGACACAGAAAAGACAGACAAAACCGTGTTATCATGCG 735
************************************************************
consensus_12211#0 GCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGG 1138
consensus_12211#1 GCAAAGTTTGATGACGATATATCCTCACATTGAACTTGTAATGCCGGGTGATGGCGTGGG 795
************************************************************
consensus_12211#0 CGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACT 1198
consensus_12211#1 CGCTGAGAGCCTGAAGCAGGAAGCAGGCGGCCATGAGGAGCAGGGAGAGCCGGCGTGACT 855
************************************************************
consensus_12211#0 CCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTG 1258
consensus_12211#1 CCGGCAGGACGGCCATGTTTGCTGCGTGACCAGCGGCAGGGGAAGGAGAACTAAGAGCTG 915
************************************************************
consensus_12211#0 GTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACT 1318
consensus_12211#1 GTGAGAGTGCAGTGCAGTGCATGGAAATACGGAGGTAACGAATGCTTATAATGGCGCACT 975
************************************************************
consensus_12211#0 GGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTT-AGCTGCCATGTCGTTTTAAAATT 1377
consensus_12211#1 GGCTAGATAGGAGGGAATGGGCGGTGTTGGGTTTTTTAGCTGCCATGTCGTTTTAAAATT 1035
************************************ ***********************
consensus_12211#0 TAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGAC 1437
consensus_12211#1 TAGGTGGGGAAGCCTTGCTTAACAAGGCTAGGAACCTTCTGATTCATTTACTTTCACGAC 1095
************************************************************
consensus_12211#0 CATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATA 1497
consensus_12211#1 CATTCGCCTAAATTTTACCAGCCCAATCCCAGCTGCTGCTGCTTCTGTACATGCCTGATA 1155
************************************************************
consensus_12211#0 GTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCAC 1557
consensus_12211#1 GTGCATTCCTTCAGTACCACATAAAGCTACCTACCCGATTACTCCACTATGCTGCCGCAC 1215
************************************************************
consensus_12211#0 CCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCT 1617
consensus_12211#1 CCAGTTTCTGGCTGTTCATACTTGGTGAAACCTTCACTTAATTAGCTATACATACACTCT 1275
************************************************************
consensus_12211#0 TGTTTGATGCATACTCGTACAAATTAATATTCTTGCTGCGTTCATATATATATATGTCC 1676
consensus_12211#1 TGTTTGAAAAAAAAAAAGA---------------------------------------- 1294
******* * * *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||