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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12217#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1872 fasta sequence
[TTAAGCTCGCCAAGAACACACCCGAGAAATCCAAAAGGGAGGGAAAAGAAAGGGGGTGGCCGGCCGGTCGGTCGGTCGGCGGCCATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTCTGAGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCCAAGCCGGGAGGTGGAGTCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGGGCGAGGTATCGGGAGTGCCTCAAGAACCACGCCGTCGGCATCGGCGGGCACGCCGTGGA-CGGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGCTCCATCGACGCGCTCCGCTGCGCCGCCTGCGGCTGCCACCGTAACTTCCACCGCAAGGAGTCGGAGTCCCCCACGGGCGTCGGGCCGGCCGAGCCTTCCGCCGTGTCCCCCGCCGCCATCTCGGCCTACGGCGCCTCGCCGCACCACCAGTTCTCCCCCTACTACCGCACCCCGGCAGGGTACCTCCACCACCAGCAGCACCAGATGGCGGCCGCGGCGGCGGCCGCGGCCGCCGCCGCAGCGGGCGGCTACCCGCAGCGGCCCCTCGCGCTGCCGTCCACCTCCCACTCGGGACGCGACGAGGGCGACGACATGTCCGGGATGGTCGGCCCCATGGTGATTGGCCCCATGGTCGGCATGTCCCTCGGCTCCGCCGGCCCCTCCGGCTCCGGCTCCGGCAAGAAGCGGTTCCGCACAAAGTTCACGCAGGAGCAGAAGGACAAGATGCTCGCCTTCGCGGAGCGGCTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGCGAGGAGGTCTGCGTCAAGCGCCATGTCCTCAAGGTTTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGGCGCCATAGCTAAGCTAAGCCAAGCAAGCTCAGCTCAGCTCATCTCCTCCCGGTGCTAGGTACCTGCACTGCAACTGCAACTGCATGCATCACCATCTCCATCTACTTCTACTACCTCCTTACCCGCGGCTAATTAGCCTTTTTCTTTGCCTTCTTTTACCTCACCTGAGTAGAAGCTTAGCTAGGTTCGTAGCGAGC-AAGCTGTTCTTGTTGGTTTTAGGGGAGGTGGTGGTTGCTGCTGCTGCTGCTTTTGCATCCTTCCTTGTTTCTTTTTCGTTATTTTATTCCATTGTGGTTGGGTTCTTTGGGCTTGTGGTTGCCGTCGTTGTTGTTTCCTAGTAGATGATGACGACGACGTTTGGTGTTGGGAAGGAAGAGGACATGGATGGCGATTTGCCGATCGATTTAGATCTTGGGAATGTAGTACTTTTGTGTTGCAATTGAAATTTCCTTCCTGGGGATTTGGGTTGCTGCACGGTTTGTTTGTTTCATCATTTCTTTTCCCCTATATTTCTTGTGCTTGGCACTTCATCATCAGTAGCACTTGTAGTTCGTCTAGCTAACAACTAGGGCAGATAAAGATTCAGAAAGGTCGGCTGCAACTATATGAGCTGCAACACTGTTGCATTCACATCGATCTCCCTCGCTTCCAATTTCCAGACCTGGGCACCAACTTGTCCATGATCCGTCCGCTTCACCTGTCTACTCTGAAATTCCAATTTCTCTAGCTACCATGTTCGCTGCATTTTTCTTCCGAGTTCTCGATCTCACTGTATCCGCTGCATTTACTCGTCTTCCACATCTCGCGAGCAGTGATGCCGCATTGCTGCCCATGTGTTAGGACGCAGAGCTTGCAGAAGCTATAGCAATGGCCGGGGACTTTTTAGAATTTAGTCTATGTGAATTCAATGAAGCCTCGTCCTC]
[+] EMBL AK109528 [TTAAGCTCGCCAAGAACACACCCGAGAAATCCAAAAGGGAGGGAAAAGAAAGGGGGTGGCCGGCCGGTCGGTCGGTCGGCGGCCATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTCTGAGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCCAAGCCGGGAGGTGGAGTCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGGGCGAGGTATCGGGAGTGCCTCAAGAACCACGCCGTCGGCATCGGCGGGCACGCCGTGGA CGGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGCTCCATCGACGCGCTCCGCTGCGCCGCCTGCGGCTGCCACCGTAACTTCCACCGCAAGGAGTCGGAGTCCCCCACGGGCGTCGGGCCGGCCGAGCCTTCCGCCGTGTCCCCCGCCGCCATCTCGGCCTACGGCGCCTCGCCGCACCACCAGTTCTCCCCCTACTACCGCACCCCGGCAGGGTACCTCCACCACCAGCAGCACCAGATGGCGGCCGCGGCGGCGGCCGCGGCCGCCGCCGCAGCGGGCGGCTACCCGCAGCGGCCCCTCGCGCTGCCGTCCACCTCCCACTCGGGACGCGACGAGGGCGACGACATGTCCGGGATGGTCGGCCCCATGGTGATTGGCCCCATGGTCGGCATGTCCCTCGGCTCCGCCGGCCCCTCCGGCTCCGGCTCCGGCAAGAAGCGGTTCCGCACAAAGTTCACGCAGGAGCAGAAGGACAAGATGCTCGCCTTCGCGGAGCGGCTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGCGAGGAGGTCTGCGTCAAGCGCCATGTCCTCAAGGTTTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGGCGCCATAGCTAAGCTAAGCCAAGCAAGCTCAGCTCAGCTCATCTCCTCCCGGTGCTAGGTACCTGCACTGCAACTGCAACTGCATGCATCACCATCTCCATCTACTTCTACTACCTCCTTACCCGCGGCTAATTAGCCTTTTTCTTTGCCTTCTTTTACCTCACCTGAGTAGAAGCTTAGCTAGGTTCGTAGCGAGC AAGCTGTTCTTGTTGGTTTTAGGGGAGGTGGTGGTTGCTGCTGCTGCTGCTTTTGCATCCTTCCTTGTTTCTTTTTCGTTATTTTATTCCATTGTGGTTGGGTTCTTTGGGCTTGTGGTTGCCGTCGTTGTTGTTTCCTAGTAGATGATGACGACGACGTTTGGTGTTGGGAAGGAAGAGGACATGGATGGCGATTTGCCGATCGATTTAGATCTTGGGAATGTAGTACTTTTGTGTTGCAATTGAAATTTCCTTCCTGGGGATTTGGGTTGCTGCACGGTTTGTTTGTTTCATCATTTCTTTTCCCCTATATTTCTTGTGCTTGGCACTTCATCATCAGTAGCACTTGTAGTTCGTCTAGCTAACAACTAGGGCAGATAAAGATTCAGAAAGGTCGGCTGCAACTATATGAGCTGCAACACTGTTGCATTCACATCGATCTCCCTCGCTTCCAATTTCCAGACCTGGGCACCAACTTGTCCATGATCCGTCCGCTTCACCTGTCTACTCTGAAATTCCAATTTCTCTAGCTACCATGTTCGCTGCATTTTTCTTCCGAGTTCTCGATCTCACTGTATCCGCTGCATTTACTCGTCTTCCACATCTCGCGAGCAGTGATGCCGCATTGCTGCCCATGTGTTAGGACGCAGAGCTTGCAGAAGCTATAGCAATGGCCGGGGACTTTTTAGAATTTAGTCTATGTGAATTCAATGAAGCCTCGTCCTC]
[+] EMBL OS1767A [ GGGGGTGGCCGGCCGGTCGGTCGGTCGGCGGCCATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTCTGAGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCCAAGCCGGGAGGTGGAGTCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGGGCGAGGTATCGGGAGTTCCTCAAGAACCACGCCGTC GCATCGGCGGGCACGCTTGGGACCGGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGC ]
[+] EMBL C97310 [ gGCCATGTCCTCAAGGTTTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGGCGCCATAGCTAAGCTAAGCCAAGCAAGCTCAGCTCAGCTCATCTCCTCCCGGTGCTAGGTACCTGCACTGCAACTGCAACTGCATGCATCACCATCTCCATCTACTTCTACTACCTCCTTACCCGCGGCTAATTAGCCTTTTTCTTTGCCTTCTTTTACCTCACCTGAGTAGAAGCTTAGCTAGGTTCGTAGCGAGCAAAGCTGTTCTTGTTGGTTTTAGGGGAGGTGGTGGTTGCTGCTGCTGCTGCTTTTGCATCCTTCCTTGTTTCTTTTTCGGTATTTTATTCCATTGTGGTTGGGGTCTTTGGGCTTNTGGTT CCGTCGTTGTTGTTT CTAGTAGATGATGACG CGACGGTTTGTGTT GGAAGGAAGA GACAT GATGG GNTTT CCG TCGNTTaa ]
consensusID : consensus_12217#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1685 fasta sequence
[GCTGCCATCTAGCGGCGCGTCAAAACTGGCAGCCAGATGGTGTCCACACTCTGCTGCATCTCTTATCCCTTCATCTCGGTCTTAACCTCGCTAAAGCTTCTCTTAGCCTCCTTCCATGCTCAGCAACACACACAAACCAAAGACTAGACAAAGCAGCTAGGACAGTAAAGCTAAGTGTTTTCCTAGCTAGGTAGCTAGCTAGCTAGACAAGCTTGCCGGCCGGCCGGCCGGCGACGGCG-ACCATGGACTTCGATGACCATGACGACGGCGACGAGGAGATGCCGCCGATGCCGGTGAGCTCGAGCTACGAGACTCCGCCGCAGCATGGCCTTGCCGGCGGTGGGATGGCGCCCAAGCCTCCTGGTGAGATTGGCAGCCGTGTGAAGGGCCCCAGCT-GCGGTGGCGGCAGGTACCGCGAGTGCCTCAAGAACCACGCGGTTGGCATCGGCGGCCACGCCGTGGACGGCTGCGGCGAGTTCATGGCGGCCGGCGAGGAGGGCACCATCGACGCGCTCCGCTGCGCCGCGTGCAACTGCCACCGCAACTTCCACCGGAAGGAGTCCGAGTCGCTTGCCGGCGAGGGCTCGCCCTTC-TCCCCGGCCGCCGTCGTCCCCTACGGCGCCACGCCGCACCACCA-GTTCTCCCCGTACTACCGCACCCCTGCCGGTTACCTTCCACCACCACCAGCACCACATGGGCCGCGGCAGCCGCGGCCGCCGCCGCCGCAGCCGGCGGCTACCCGCAGCGGCCCCTCGCGCTCCCGTC-CACCTCCCACAGCGGCCGCGACGACGGCGACGACC-TG-TCCGGGATGGT-GGGGCCCATGTCGGCGGTGGGGCCGCTCAGCGGCATGTCCCTCGGCGCCGGCCCG-TCCGGCTCCG-GCTCCGGCAAGAAGGCGGTTACCGCAACAAGTTCACCCAGGAGCAGAAGGACAAGATGCTGGCGTTCGCCGAGCGCGTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGTGACGAGGTCGGCGTCAAGCGCCACGTGCTCAAGGTGTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGCTGCCATGACCGGGAGCAAATGCATTTGATCTCATCGTCGGCATGCATGACCAAGTTGTGGGACGACGCATGCATCCATGTCCATCCCAAGCTAGCTGAGCTGATCGACCGGCCGTGGCTTAGCCACCCGGACCCCGGTATGGTAGGTACCTGAACCTTATTTATTTAGAGTTGGACTTAATTAATTGGTGGCTTAGGTTAATCTGTAGCAAGAGAGACTGAGAGAGCATTCGTTCTCGGCTCTAGTAGGTGGTTCTTTCTTCTTTTCATTTTAACTGTTGCTCGTGCTGTTTAATTCCTATGCATGGCTTGGCCATTTGCCGATTTGGTTTTTCTTGGGAATGTCCCTGATGTTTCAAGTGATCGATCAGCGCAGGTGAGGAATTGTGTCTGGGGATTGGGGCTAGCTAGAGTAGCTGCATGGATTCAGTGTATGTGCTCTTATATTTTTTGTGGTTGGGACCTGCGCGCTGGGATAATTTTACCCATGGGTCGGGCCATTCGTCTAGGTTTGCTAGTAGCAATAGTTTGTTGGTTACTACGGAGTACTGCCACTCCTAAAAAAGATAGGCCACTGTTGCATTCCTTCTCAAAAAAAAAAAAAAAGG]
[+] EMBL CB682271 [GCTGCCATCTAGCGGCGCGTCAAAACTGGCAGCCAGATGGTGTCCACACTCTGCTGCATCTCTTATCCCTTCATCTCGGTCTTAACCTCGCTAAAGCTTCTCTTAGCCTCCTTCCATGCTCAGCAACACACACAAACCAAAGACTAGACAAAGCAGCTAGGACAGTAAAGCTAAGTGTTTTCCTAGCTAGGTAGCTAGCTAGCTAGACAAGCTTGCCGGCCGGCCGGCCGGCGACGGCG ACCATGGACTTCGATGACCATGACGACGGCGACGAGGAGATGCCGCCGATGCCGGTGAGCTCGAGCTACGAGACTCCGCCGCAGCATGGCCTTGCCGGCGGTGGGATGGCGCCCAAGCCTCCTGGTGAGATTGGCAGCCGTGTGAAGGGCCCCAGCT GCGGTGGCGGCAGGTACCGCGAGTGCCTCAAGAACCACGCGGTTGGCATCGGCGGCCACGCCGTGGACGGCTGCGGCGAGTTCATGGCGGCCGGCGAGGAGGGCACCATCGACGCGCTCCGCTGCGCCGCGTGCAACTGCCACCGCAACTTCCACCGGAAGGAGTCCGAGTCGCTTGCCGGCGAGGGCTCGCCCTTC TCCCCGGCCGCCGTCGTCCCCTACGGCGCCACGCCGCACCACCA GTTCTCCCCGTACTACCGCACCCC ]
[+] EMBL OS0013A [ GACAAAGCAGCTAGGACAGTAAAGCTAAGTGTTTTCCTAGCTAGGTAGCTAGCTAGCTAGACAAGCTTGCCGGCCGGCCGG CGGTATCGGCGAACCATGGACTTCGATGACCATGACGACGGCGACGAGGAGATGCCGCCGATGCCGGTGAGCTCGAGCTACGAGACTNCGCCGCAGCATGGCCTTGCCGGCGGTGGGATGGCGCCCAAGNCTNCTGGTGAGATTGGCAGCCGTGTGAAGGGCCCCAGCTNGCGGTGGCGGTAGGT ]
[+] EMBL C97855 [ ACAAAGCAGCTAGGACAGTAAAGCTAAGTGTTTTCCTAGCTAGGTAGCTAGCTAGCTAGACAAGCTTTGCGGCCGGCCGGCCGGNGACGGCG ACCATGGA TTCGATGACCATGACGACGGCGACGAGGAGATGCCGCCGATGCCGGTGAGCTCGAGCTACGAGA TCCGCCGCAGCATGGCCTTGCCGGCGGTGGGATGGCGCCNAAGCCTCCTGGTGAGATTGGCAGCCGTGTGAAGGGCCCCAGCT GCGGTGGCGGNAGGTACCGCGAGTGCCTCAAGAACCACGCGGTTGGNATCGGCGGCCACGCCGTGGACGGCTGCGGCGAGTTCATGGCGGCCGGCGAGGAGGGCACCATCGACGCGCTCCG TGCGCCGCGTGCAACTGCCACCGCAACTTCCACCGGAAGGAGTCCGAGTCGCTTGCCGGCGAGGGCTCGCCCTTC TCCCNGGCCGCCGTCGTCCCCTACGGCGCCACGCCGCACCACCA GTTCTCCCCGTACTACCGCACCCC ]
[+] EMBL AU225145 [ gcCGC TGCCGGCGAGGGCTCGCCCTTCTTCCCCGGCCGCCGTCGTCCCCTACGGCGCCACGCCGCACCACCATGTTCTCCCCGTACTACCGCACCCCTGCCGGTTACCTTCCACCACCACCAGCACCACATGGGCCGCGGCAGCCGCGGCCGCCGCCGCCGCAGCCGGCGGCTACCCGCAGCGGCCCCTCGCGCTCCCGTCACACCTCCCACAGCGGCCGCGACGACGGCGACGACCTTGTTCCGGGATGGTGGGGGCCCATGTCGGCGGTGGGGCCGCTCAGCGGCATGTCCCTCGGCGCCGGCCCGTTCCGGCTCCG GCTCCGGCAAGAAGGCGGTTACCGCAA ]
[+] EMBL AK108246 [ CGGCAGCCGCGGCCGCCGCCGCCGCAGCCGGCGGCTACCCGCAGCGGCCCCTCGCGCTCCCGTC CACCTCCCACAGCGGCCGCGACGACGGCGACGACC TG TCCGGGATGGT GGGGCCCATGTCGGCGGTGGGGCCGCTCAGCGGCATGTCCCTCGGCGCCGGCCCG TCCGGCTCCG GCTCCGGCAAGAA GCGGTT CCGCACCAAGTTCACCCAGGAGCAGAAGGACAAGATGCTGGCGTTCGCCGAGCGCGTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGTGACGAGGTCGGCGTCAAGCGCCACGTGCTCAAGGTGTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGCTGCCATGACCGGGAGCAAATGCATTTGATCTCATCGTCGGCATGCATGACCAAGTTGTGGGACGACGCATGCATCCATGTCCATCCCAAGCTAGCTGAGCTGATCGACCGGCCGTGGCTTAGCCACCCGGACCCCGGTATGGTAGGTACCTGAACCTTATTTATTTAGAGTTGGACTTAATTAATTGGTGGCTTAGGTTAATCTGTAGCAAGAGAGACTGAGAGAGCATTCGTTCTCGGCTCTAGTAGGTGGTTCTT ]
[+] EMBL AU225143 [ CGGCAGCCGCGGCCGCCGCCGCCGCAGCCGGCGGCTACCCGCAGCGGCCCCTCGCGCTCCCGTC CACCTCCCACAGCGGCCGCGACGACGGCGACGACC TG TCCGGGATGGT GGGGCCCATGTCGGCGGTGGGGCCGCTCAGCAGCATGTCCCTCGGCGCCGGCTCG TCCGGCTCCGAGCTCCGG ]
[-] EMBL CB682272 [ ACAAGATGCTGGCGTTCGCCGAGCGCGTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGTGACGAGGTCGGCGTCAAGCGCCACGTGCTCAAGGTGTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGCTGCCATGACCGGGAGCAAATGCATTTGATCTCATCGTCGGCATGCATGACCAAGTTGTGGGACGACGCATGCATCCATGTCCATCCCAAGCTAGCTGAGCTGATCGACCGGCCGTGGCTTAGCCACCCGGACCCCGGTATGGTAGGTCCCTGAACCTTATTTATTTAGAGTTGGACTTAATTAATTGGTGGCTTAGGTTAATCTGTAGCAAGAGAGACTGAGAGAGCATTCGTTCTCGGCTCTAGTAGGTGGTTCTTTCTTCTTTTCATTTTAACTGTTGCTCGTGCTGTTTAATTCCTATGCATGGCTTGGCCATTTGCCGATTTGGTTTTTCTTGGGAATGTCCCTGATGTTTCAAGTGATCGATCAGCGCAGGTGAGGAATTGTGTCTGGGGATTGGGGCTAGCTAGAGTAGCTGCATGGATTCAGTGTATGTGCTCTTATATTTTTTGTGGTTGGGACCTGCGCGCTGGGATAATTTTACCCATGGGTCGGGCCATTCGTCTAGGTTTGCTAGTAGCAATAGTTTGTTGGTTACTACGGAGTACTGCCACTCCTAAAAAAGATAGGCCACTGTTGCATTCCTTCTCAAAAAAAAAAAAAAAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12217#0 ------------------------------------------------------------
consensus_12217#1 GCTGCCATCTAGCGGCGCGTCAAAACTGGCAGCCAGATGGTGTCCACACTCTGCTGCATC 60
consensus_12217#0 ------------------------------------------------------------
consensus_12217#1 TCTTATCCCTTCATCTCGGTCTTAACCTCGCTAAAGCTTCTCTTAGCCTCCTTCCATGCT 120
consensus_12217#0 ---------------------------TTAAGCTCGCCAAGA--ACACACCCGAGAAATC 31
consensus_12217#1 CAGCAACACACACAAACCAAAGACTAGACAAAGCAGCTAGGACAGTAAAGCTAAGTGTTT 180
** ** * ** * * * ** *
consensus_12217#0 CAAAAGGGAGGGA-------AAAGAAAGGGGGTGGCCGGCCGGTCGGTCGGT--CGGCGG 82
consensus_12217#1 TCCTAGCTAGGTAGCTAGCTAGCTAGACAAGCTTGCCGGCCGGCCGGCCGGCGACGGCGA 240
** *** * * * * * * ********* *** *** *****
consensus_12217#0 CCATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTC 142
consensus_12217#1 CCATGGACTTCGATGACCATGACGA------CGGCGACGAGGAGATGCCGCCGATGCCGG 294
******* ***** *********** ****************** ********
consensus_12217#0 TGAGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGC 202
consensus_12217#1 TGAGCTCGAGCTACGAGACTCCGCCGCAGCATGGCCTTGC---CGGCGGTGGGATGGCGC 351
******** ******* * *** ***** ** **** ******** ** **
consensus_12217#0 CCAAGCCGGGAGGTGGAGTCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAG 262
consensus_12217#1 CCAAGCCTCCTGGTGAGATTGGCAGCCGTGTGAAGGGCCCCAGCTGCGGTGGCGGC---- 407
******* **** * *** ** * * ** * * ***** **
consensus_12217#0 GGGCGAGGTATCGGGAGTGCCTCAAGAACCACGCCGTCGGCATCGGCGGGCACGCCGTGG 322
consensus_12217#1 -----AGGTACCGCGAGTGCCTCAAGAACCACGCGGTTGGCATCGGCGGCCACGCCGTGG 462
***** ** ******************** ** *********** **********
consensus_12217#0 ACGGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGCTCCATCGACGCGCTCCGCTGCG 382
consensus_12217#1 ACGGCTGCGGCGAGTTCATGGCGGCCGGCGAGGAGGGCACCATCGACGCGCTCCGCTGCG 522
********************** ************** *********************
consensus_12217#0 CCGCCTGCGGCTGCCACCGTAACTTCCACCGCAAGGAGTCGGAGTCCCCCACGGGCGTCG 442
consensus_12217#1 CCGCGTGCAACTGCCACCGCAACTTCCACCGGAAGGAGTCCGAGTCGCTTGCCGGCGA-G 581
**** *** ********* *********** ******** ***** * * **** *
consensus_12217#0 GGCCGGCCGAGCCTTCCGCCGTGTCCCCCGCCGCCATCTCGGCCTACGGCGCCTCGCCGC 502
consensus_12217#1 GGCTCGC----CCTTC-------TCCCCGGCCGCCGTCGTCCCCTACGGCGCCACGCCGC 630
*** ** ***** ***** ****** ** *********** ******
consensus_12217#0 ACCACCAGTTCTCCCCCTACTACCGCACCCCGGCAGGGTACCT-CCACCACCAGCAGCAC 561
consensus_12217#1 ACCACCAGTTCTCCCCGTACTACCGCACCCCTGCCGGTTACCTTCCACCACCACCAGCAC 690
**************** ************** ** ** ***** ********* ******
consensus_12217#0 CAGATGGCGGCCGCGGCGGCGGCCGCGGCCGCCGCCGCAGCGGGCGGCTACCCGCAGCGG 621
consensus_12217#1 CACATGG--GCCGCGGCAGCCGCGGCCGCCGCCGCCGCAGCCGGCGGCTACCCGCAGCGG 748
** **** ******** ** ** ** ************** ******************
consensus_12217#0 CCCCTCGCGCTGCCGTCCACCTCCCACTCGGGACGCGACGAGGGCGACGACATGTCCGGG 681
consensus_12217#1 CCCCTCGCGCTCCCGTCCACCTCCCACAGCGGCCGCGACGACGGCGACGACCTGTCCGGG 808
*********** *************** ** ******** ********* ********
consensus_12217#0 ATGGTCGGCCCCATG---GTGATTGGCCCCATGGTCGGCATGTCCCTCGGCTCCGCCGGC 738
consensus_12217#1 ATGGTGGGGCCCATGTCGGCGGTGGGGCCGCTCAGCGGCATGTCCCTCGG---CGCCGGC 865
***** ** ****** * * * ** ** * *************** *******
consensus_12217#0 CCCTCCGGCTCCGGCTCCGGCAAGAAG-CGGTT-CCGCACAAAGTTCACGCAGGAGCAGA 796
consensus_12217#1 CCGTCCGGCTCCGGCTCCGGCAAGAAGGCGGTTACCGCAACAAGTTCACCCAGGAGCAGA 925
** ************************ ***** ***** ******** **********
consensus_12217#0 AGGACAAGATGCTCGCCTTCGCGGAGCGGCTCGGGTGGCGCATCCAGAAGCACGACGAGG 856
consensus_12217#1 AGGACAAGATGCTGGCGTTCGCCGAGCGCGTCGGGTGGCGCATCCAGAAGCACGACGAGG 985
************* ** ***** ***** ******************************
consensus_12217#0 CCGCCGTGCAGCAGTTCTGCGAGGAGGTCTGCGTCAAGCGCCATGTCCTCAAGGTTTGGA 916
consensus_12217#1 CCGCCGTGCAGCAGTTCTGTGACGAGGTCGGCGTCAAGCGCCACGTGCTCAAGGTGTGGA 1045
******************* ** ****** ************* ** ******** ****
consensus_12217#0 TGCACAACAACAAGCACACCCTGGGCAAGAAGGCGCCATAGCTAAGCTAAGCCAAGCAAG 976
consensus_12217#1 TGCACAACAACAAGCACACCCTGGGCAAGAAGCTGCCATGACCGGG--------AGCAAA 1097
******************************** ***** * * *****
consensus_12217#0 CTCAGCTCAGCTCATCTCCTCCCGGTGCTAGGTACCTGCACTGCAACTGCAACTGCATGC 1036
consensus_12217#1 TGCATTTGATCTCATCGTCGGCATGCATGACCAAGTTG---TGGGACGACGCATGCATCC 1154
** * * ****** * * * * * ** ** ** * ***** *
consensus_12217#0 ATCACCATCTCCATCTACTTCTACTACCTCCTTACCCGCGGCTAATTAGCCTTTTTCTTT 1096
consensus_12217#1 ATGTCCATCCCAAGCTAGCTGAGCTGATCGACCGGCCGTGGC---TTAGCCACCCGGACC 1211
** ***** * * *** * ** *** *** ******
consensus_12217#0 GCCTTCTTTTACCTCACCTGAGTAGAAGCTTAGCTAGGTTCGTAGCGAGCAAGCTGTTCT 1156
consensus_12217#1 CCGGTATGGTAGGT-ACCTGAACCTTA-TTTATTTAGAGTTGGACTTAATTAATTGGT-- 1267
* * * ** * ****** * *** *** * * * * * ** *
consensus_12217#0 TGTTGGTTTTAGGGGAGGTGGTGGTTGCTGCTGCTGCTGCTTTTGCATCCTTCCTTGTTT 1216
consensus_12217#1 -----GGCTTAGGTTAATCTGTAG---CAAGAGAGACTGAGAGAGCATTCGTTCTCGGCT 1319
* ***** * ** * * * *** **** * * ** * *
consensus_12217#0 CTTTTTCGTTATTTTATTCCATTGTGGTTGGGTTCTTTGGGCTTGTGGTTGCCGTCGTTG 1276
consensus_12217#1 CTAGTAGGTGGTTCTTTCTTCTTTTCATTTTAACTGTTGCTCGTGCTGTTTAATTCCTAT 1379
** * ** ** * * ** * ** *** * ** *** ** *
consensus_12217#0 TTGTTTCCTAGTAGATGATGACGACGACGTTTGGTGTTGGGAAGGAAGAGGACATGGATG 1336
consensus_12217#1 GCATGGCTTGGCCATT--TGCCGATTTGGTTTT-TCTTGGGAATGTCCCTGATGTTTCAA 1436
* * * * * ** *** **** * ******* * ** *
consensus_12217#0 GCGATTTGCCGATCGATTTAGATCTTGGGAATGTAGTACTTTTGTGTTGCAATTGAAATT 1396
consensus_12217#1 GTGAT----CGATCAGCGCAGGTG----------AGGAATTGTGTCTGGGGATTGGGGCT 1482
* *** ***** ** * ** * ** *** * * **** *
consensus_12217#0 TCCTTCCTGGGGATTTGGGTTGCTGCACGGTTTGTTTGTTTCATCATTTCTTTTCCCCTA 1456
consensus_12217#1 -----------AGCTAGAGTAGCTGCATGGATTCAGTGTATG----------TGCTCTTA 1521
* * ** ****** ** ** *** * * * * **
consensus_12217#0 TATTTCTTGTGCTTGGCACTTCATCATCAGTAGCACTTG--TAGTTCGTCTAGCTAA-CA 1513
consensus_12217#1 TATTTTTTGTGGTTGGGACCTGCGCGCTGGGATAATTTTACCCATGGGTCGGGCCATTCG 1581
***** ***** **** ** * * * * * ** * *** ** * *
consensus_12217#0 ACTAGGGCAGATAAAGATTCAGAAAGGTCGGCTGCAACTATATGAGCTGCAACACTGTTG 1573
consensus_12217#1 TCTAGGTTTGCTAGTAGC---AATAGTTTGTTGGTTACTACG-GAGTACTGCCACTCCTA 1637
***** * ** * ** * * * **** *** **** *
consensus_12217#0 CATTCACATCGATCTCCCTCGCTTCCAATTTCCAGACCTGGGCACCAACTTGTCCATGAT 1633
consensus_12217#1 AAAA-AGATAGGCCACTGTTGCATTCCTTCTCAAAAAAAAAAAAAAAGG----------- 1685
* * ** * * * * ** * * * ** * * * *
consensus_12217#0 CCGTCCGCTTCACCTGTCTACTCTGAAATTCCAATTTCTCTAGCTACCATGTTCGCTGCA 1693
consensus_12217#1 ------------------------------------------------------------
consensus_12217#0 TTTTTCTTCCGAGTTCTCGATCTCACTGTATCCGCTGCATTTACTCGTCTTCCACATCTC 1753
consensus_12217#1 ------------------------------------------------------------
consensus_12217#0 GCGAGCAGTGATGCCGCATTGCTGCCCATGTGTTAGGACGCAGAGCTTGCAGAAGCTATA 1813
consensus_12217#1 ------------------------------------------------------------
consensus_12217#0 GCAATGGCCGGGGACTTTTTAGAATTTAGTCTATGTGAATTCAATGAAGCCTCGTCCTC 1872
consensus_12217#1 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||