These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12218#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2192 fasta sequence [ACTGCACTTCCCTTTTCAGCTCTTCTCCAACCTCAATTTCACCCCATTTTTCCATATCCTCTCTGCACACGTACGTACAGGTAAACGTGCCTGATCATGGACATGGACTCGTCGCCGTCGACACAGGACTGTGGCGGCTGGCTGCTGTACGTCTCCCTCGCTGCCAAATGCGGCGGCGACCCTTGCCGCGTCGTCGGCTTCGTCGCCGTTGCCGTCGTCGCCTTCGCCGTCACGTCGCTCCTGCACTGGCTGTCGCCCGGTGGCCCGGCGTGGGGGAGGTATTGGTGGAACAGGAGGGGTGGTCTGGGCATTGCTGCCGCCATTCCTGGGCCCCGTGGGTTGCCCGTGCTCGGCAGCATGTCGCTCATGGCGGGACTCGCGCACCGGAAGCTCGCCGCGGCGGCGGGGGGCTCGCCGGCGAGGCGGCGCCTCATGGCGCTGTCTCTCGGGGAGACACGG-GTGGTGGTCACCGCCGACCCCGGCGTCGCGCGGGAGCTCCTCGCCAGCGCGGCGTTCGCCGACCGGCCGGTGAAGGAGTCCGCGTACGGGATGCTGTTCCACCGCGCCATCGGGTTCGCGCCCTACGGCACGTACTGGCGCGCGCTCCGCCGCGTCGCGTCCACGCACCTCTTCTCGCCGAGGCAGGTGTCCGCCTCCGCCGCGCAGCGCGCGGTGATCGCGCGCCAGATGGTGGAGGCCATGAGGTCCGCCGCCGCCGCCGCCGCCGGTGGCGGCGTGGCGGCGAGGCCGTTCCTGAAGCGCGCGTCGCTGCACAACGTGATGTGGTCGGTGTTCGGGAGGAAGTACGAGCTGGCGGCGCCGGAGAGCGAGGAGACGGCGGAGCTGAGGAGCATGGTGGACGAAGGCTACGACCTCCTCGGCCAGCTCAACTGGTCCGACCACCTCCCATGGCTCGCACCCTTTGACCTCAAGAAGACGCGGTCAAGGTGCTCGTCCCTTGTCCCCCGCGTCAACCGCTTCGTCACCCGCATCATCGACGAGCACCGTGCTCGCCTCAGCCTCGCCGTCGACGCCGCCGTCGACTTCACCGACGTCCTTCTCTCCCTCCACGGCGGCGACAAGCTCTCCGACGCCGACATGGTCGCCGTCCTCTGGGAGATGATCTTTCGAGGGACGGACACGGTGGCGGTCCTGATCGAGTGGGTGGCGGCGAGGCTGGTGCTGCACCAGGACGTGCAGGCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCCTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGGTC-GGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTCTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGTAATGCTTGTATTTTTGTGTGTTTTGCACGTCCTAAGTAGTGGAGTAGTAGCTGATAATAGTTAGTTAATTACTCTGCTATTTAGTCATAGTTAACTACCTACCTGCAGGTGATGAGAGTGACAG--TTTTTTTTTGTTTAATTAACTGCAGGTGATGAGTGTAGAATAGCTCGGTATGCCCATCTCTATCCTAAGTGCACGCGTGCGTGTGTAATTGTTGTCAGATGTATGTTGTTTTCAATGATAATGTACATAATTGGGCCGAAAAAAAAAA] [+] EMBL AK072163 [ACTGCACTTCCCTTTTCAGCTCTTCTCCAACCTCAATTTCACCCCATTTTTCCATATCCTCTCTGCACACGTACGTACAGGTAAACGTGCCTGATCATGGACATGGACTCGTCGCCGTCGACACAGGACTGTGGCGGCTGGCTGCTGTACGTCTCCCTCGCTGCCAAATGCGGCGGCGACCCTTGCCGCGTCGTCGGCTTCGTCGCCGTTGCCGTCGTCGCCTTCGCCGTCACGTCGCTCCTGCACTGGCTGTCGCCCGGTGGCCCGGCGTGGGGGAGGTATTGGTGGAACAGGAGGGGTGGTCTGGGCATTGCTGCCGCCATTCCTGGGCCCCGTGGGTTGCCCGTGCTCGGCAGCATGTCGCTCATGGCGGGACTCGCGCACCGGAAGCTCGCCGCGGCGGCGGGGGGCTCGCCGGCGAGGCGGCGCCTCATGGCGCTGTCTCTCGGGGAGACACGG GTGGTGGTCACCGCCGACCCCGGCGTCGCGCGGGAGCTCCTCGCCAGCGCGGCGTTCGCCGACCGGCCGGTGAAGGAGTCCGCGTACGGGATGCTGTTCCACCGCGCCATCGGGTTCGCGCCCTACGGCACGTACTGGCGCGCGCTCCGCCGCGTCGCGTCCACGCACCTCTTCTCGCCGAGGCAGGTGTCCGCCTCCGCCGCGCAGCGCGCGGTGATCGCGCGCCAGATGGTGGAGGCCATGAGGTCCGCCGCCGCCGCCGCCGCCGGTGGCGGCGTGGCGGCGAGGCCGTTCCTGAAGCGCGCGTCGCTGCACAACGTGATGTGGTCGGTGTTCGGGAGGAAGTACGAGCTGGCGGCGCCGGAGAGCGAGGAGACGGCGGAGCTGAGGAGCATGGTGGACGAAGGCTACGACCTCCTCGGCCAGCTCAACTGGTCCGACCACCTCCCATGGCTCGCACCCTTTGACCTCAAGAAGACGCGGTCAAGGTGCTCGTCCCTTGTCCCCCGCGTCAACCGCTTCGTCACCCGCATCATCGACGAGCACCGTGCTCGCCTCAGCCTCGCCGTCGACGCCGCCGTCGACTTCACCGACGTCCTTCTCTCCCTCCACGGCGGCGACAAGCTCTCCGACGCCGACATGGTCGCCGTCCTCTGGGAGATGATCTTTCGAGGGACGGACACGGTGGCGGTCCTGATCGAGTGGGTGGCGGCGAGGCTGGTGCTGCACCAGGACGTGCAGGCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCCTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGATC GGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTCTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGTAATGCTTGTATTTTTGTGTGTTTTGCACGTCCTAAGTAGTGGAGTAGTAGCTGATAATAGTTAGTTAATTACTCTGCTATTTAGTCATAGTTAACTACCTACCTGCAGGTGATGAGAGTGACAG TTTTTTTTTGTTTAATTAACTGCAGGTGATGAGTGTAGA ] [+] EMBL CB657899 [ GCTCTTCTCCAACCTCAATTTCACCCCATTTTTCCATATCCTCTCTGCACACGTACGTACAGGTAAACGTGCCTGATCATGGACATGGACTCGTCGCCGTCGACACAGGACTGTGGCGGCTGGCTGCTGTACGTCTCCCTCGCTGCCAAATGCGGCGGCGACCCTTGCCGCGTCGTCGGCTTCGTCGCCGTTGCCGTCGTCGCCTTCGCCGTCACGTCGCTCCTGCACTGGCTGTCGCCCGGTGGCCCGGCGTGGGGGAGGTATTGGTGGAACAGGAGGGGTGGTCTGGGCATTGCTGCCGCCATTCCTGGGCCCCGTGGGTTGCCCGTGCTCGGCAGCATGTCGCTCATGGCGGGACTCGCGCACCGGAAGCTCGCCGCGGCGGCGGGGGGCTCGCCGGCGAGGCGGCGCCTCATGGCGCTGTCTCTCGGGGAGACACGG GTGGTGGTCACCGCCGACCCCGGCGTCGCGCGGGAGCTCCTCGCCAGCGCGGCGTTCGCCGACCGGCCGGTGAAGGAGTCCGCGTACGGGATGCTGTTCCACCGCGCCATCGGGTTCGCGCCCTACGGCACGTACTGGCGCGCGCTCCGCCGCGTCGCGTCCACGCACCTCTTCTCGCCGAGGCAGGTGTCCGCCTCCGCCGCGCAGCGCGCGGTGATCGCGCGCCAGATGGTGGAGGCCATGAAGTCCGCCGCCGCCGCCGCCGCCGGTGGCGGCGTGGCGGCAAGGCCGTTCCTGAAGCGCGCGTCGCTGCACAACGT ] [+] EMBL CB673949 [ CGGGGAGACACGGAGTGGTGGTCACCGCCGACCCCGGCGTCGCGCGGGAGCTCCTCGCCAGCGCGGCGTTCGCCGACCGGCCGGTGAAGGAGTCCGCGTACGGGATGCTGTTCCACCGCGCCATCGGGTTCGCGCCCTACGGGACGTACTGGCGCGCGCTCCGCCGCGTCGCGTCCACGCACCTCTTCTCGCCGAGGCAGGTGTCCGCCTCCGCCGCGCAGCGCGCGGTGATCGCGCGCCAGATGGTGGAGGCCATGAGGTCCGCCGCCGCCGCCGCCGCCGGTGGCGGCGTGGCGGTTAGGCCGTTCCTGAAGCGCGCGTCGCTGCACAACGTGATGTGGTCGGTGTTCTGGAGGAAGTACGATCTGGCGGCGCCGGAGAGCGAGGATACGGCTGAGCTGAGGAGCATGGTGGACGAAGGCTACCACCTCCTCTGTCAGCTCATCTGGTCCGACCACCTCCCATGGCTCGCACCCTTTGACCTCAAGAAGACGCGGTCAAGGTGCTCGTCCCTTGTCCCCCGCGTCGACCGCTTCGTCACCCGCATCATCGACGAGCACCGTGCTCGCCTCAGCCTCACCGTCGACGCCGCCGTCGACTTCACCGACGTCCTTCTCTCCCTCCACGGCGGCGACAAGCTCTCCGACGCCGACATGGTCGCCGTCCTCTGGGAGATGATCTTTCGAGGGACGGACACGGTGG ] [+] EMBL CB655569 [ GCTGGCGGCGCCGGAGAGCGAGGAGACGGCGGAGCTGAGGAGCATGGTGGACGAAGGCTACGACCTCCTCGGCCAGCTCAACTGGTCCGACCACCTCCCATGGCTCGCACCCTTTGACCTCAAGAAGACGCGGTCAAGGTGCTCGTCCCTTGTCCCCCGCGTCAACCGCTTCGTCACCCGCATCATCGACGAGCACCGTGCTCGCCTCAGCCTCGCCGTCGACGCCGCCGTCGACTTCACCGACGTCCTTCTCTCCCTCCACGGCGGCGACAAGCTCTCCGACGCCGACATGGTCGCCGTCCTCTGGGAGATGATCTTTCGAGGGACGGACACGGTGGCGGTCCTGATCGAGTGGGTGGCGGCGAGGCTGGTGCTGCACCAGGACGTGCAGGCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCCTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGGTCGGGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGGTGC ] [+] EMBL CB628186 [ CCTCCCATGGCTCGCACCCTTTGACCTCCAGAAGACGCGGTCAAGGTGCTCGTCCCTTGTCCCCCGCGTCAACCGCTTCGTCACCCGCATCATCGACGAGCACCGTGCTCGCCTCAGCCTCGCCGTCGACGCCGCCGTAGACTTCACCGACGTCCTTCTCTCCCTCCACGGCGGCGACAAGCTCTCCGACGCCGACATGGTCGCCGTCCTCTGGGAGATGATCTTTCGAGGGACGGACACGGTGGCGGTCCTGATCGAGTGGGTGGCGGCGAGGCTGGTGCTGCACCAGGACGTGCAGGCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCCTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCCGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAGCCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCGCGGAGTTTCCG ] [-] EMBL CB673950 [ CGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCCTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGGTC GGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTCTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCC ] [-] EMBL CB628187 [ TACACGTCGGCGGGTTCCTCATACCCTCCGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAGCCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCGCGGAGTTTCCGATAATGGGGTC GGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACCGTTGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCGAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACTGCCACGTGAGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTCTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGTAATGCTTGTATTTTTGTGTGTTTTGCACGTCCTAAGTAGTGGAGTAGTAGCTGATAATAGTTAGTTAATTACTCTGCTATTTAGTCATAGTTAACTACCTACCTGCAGGTGATGAGAGTGACAGTTTTTTTTTTTGTTTAATTAACTGCAGGTGATGAGTGTATAATAGCTCGGTATGCCCATCTCTATCCTAAGTGCACGCGTGCGTGTGTAATTGTTGTCAGATGTATGTTGTTTTCAATGATAATGTACATAATTGGGC ] [-] EMBL CB655570 [ TCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGGTC GGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTCTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGTAATGCTTGTATTTTTGTGTGTTTTGCACGTCCTAAGTAGTGGAGTAGTAGCTGATAATAGTTAGTTAATTACTCTGCTATTTAGTCATAGTTAACTACCTACCTGCAGGTGATGAGAGTGACAG TTTTTTTTTGTTTAATTAACTGCAGGTGATGAGTGTAGAATAGCTCGGTATG ] [+] EMBL BI812325 [ AGGCTAA GCCGCGACGCAAGGTGTGATGACGTGTCACCACCGCCACGTGGGACTAAGACGAGGAGAGGGAA CCGACTTCCACTTCCTTCTAGGGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGCATGTAATGCTTGTATTTTTGTGTGTTTTGCACGTCCTAAGTAGTGGAGTAGTAGCTGATAATAGTTAGTTAATTACTCTGCTATTTAGTCATAGTTAACTACCTACCTGCCGGTGATGAGAGTGACAGT TTTTTTTTTGTTTAATTAACTGCCGGTGATGAGTGTATAATAGCTCGGTATGCCCATCTCTATCCTAAGTGCACGCGTGCGTGTGTAATTATTGTCAGATGTATGTTGTTTTCAATGATAATGTACATATTTTTGGCGAAAAAAAAAA] consensusID : consensus_12218#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 788 fasta sequence [CGAGGCTGGTGCTGCACCAGGACGTGCAGGCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCNTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGGTCGGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTTTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGTAATGCTTGTATTTTTGTGTGTTTTGCAAAAAAAAAAAGA] [-] EMBL CB657900 [CGAGGCTGGTGCTGCACCAGGACGTGCAGGCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCGGACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCNTGCGCCTCCACCCGCCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTCCTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCCGTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGACCAGGCCACGGAGTTTCCGATAATGGGGTCGGATCTCAGGCTCGCGCCGTTCGGGTCAGGAAGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACGTTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCGGAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGACGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCCGACTTCCACTTCCTTTTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTTACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGTAATGCTTGTATTTTTGTGTGTTTTGCAAAAAAAAAAAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12218#0 ACTGCACTTCCCTTTTCAGCTCTTCTCCAACCTCAATTTCACCCCATTTTTCCATATCCT 60 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 CTCTGCACACGTACGTACAGGTAAACGTGCCTGATCATGGACATGGACTCGTCGCCGTCG 120 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 ACACAGGACTGTGGCGGCTGGCTGCTGTACGTCTCCCTCGCTGCCAAATGCGGCGGCGAC 180 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 CCTTGCCGCGTCGTCGGCTTCGTCGCCGTTGCCGTCGTCGCCTTCGCCGTCACGTCGCTC 240 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 CTGCACTGGCTGTCGCCCGGTGGCCCGGCGTGGGGGAGGTATTGGTGGAACAGGAGGGGT 300 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GGTCTGGGCATTGCTGCCGCCATTCCTGGGCCCCGTGGGTTGCCCGTGCTCGGCAGCATG 360 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 TCGCTCATGGCGGGACTCGCGCACCGGAAGCTCGCCGCGGCGGCGGGGGGCTCGCCGGCG 420 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 AGGCGGCGCCTCATGGCGCTGTCTCTCGGGGAGACACGGGTGGTGGTCACCGCCGACCCC 480 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GGCGTCGCGCGGGAGCTCCTCGCCAGCGCGGCGTTCGCCGACCGGCCGGTGAAGGAGTCC 540 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GCGTACGGGATGCTGTTCCACCGCGCCATCGGGTTCGCGCCCTACGGCACGTACTGGCGC 600 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GCGCTCCGCCGCGTCGCGTCCACGCACCTCTTCTCGCCGAGGCAGGTGTCCGCCTCCGCC 660 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GCGCAGCGCGCGGTGATCGCGCGCCAGATGGTGGAGGCCATGAGGTCCGCCGCCGCCGCC 720 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GCCGCCGGTGGCGGCGTGGCGGCGAGGCCGTTCCTGAAGCGCGCGTCGCTGCACAACGTG 780 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 ATGTGGTCGGTGTTCGGGAGGAAGTACGAGCTGGCGGCGCCGGAGAGCGAGGAGACGGCG 840 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GAGCTGAGGAGCATGGTGGACGAAGGCTACGACCTCCTCGGCCAGCTCAACTGGTCCGAC 900 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 CACCTCCCATGGCTCGCACCCTTTGACCTCAAGAAGACGCGGTCAAGGTGCTCGTCCCTT 960 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GTCCCCCGCGTCAACCGCTTCGTCACCCGCATCATCGACGAGCACCGTGCTCGCCTCAGC 1020 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 CTCGCCGTCGACGCCGCCGTCGACTTCACCGACGTCCTTCTCTCCCTCCACGGCGGCGAC 1080 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 AAGCTCTCCGACGCCGACATGGTCGCCGTCCTCTGGGAGATGATCTTTCGAGGGACGGAC 1140 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 ACGGTGGCGGTCCTGATCGAGTGGGTGGCGGCGAGGCTGGTGCTGCACCAGGACGTGCAG 1200 consensus_12218#1 -------------------------------CGAGGCTGGTGCTGCACCAGGACGTGCAG 29 ***************************** consensus_12218#0 GCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCG 1260 consensus_12218#1 GCCAGGGTCCATGACGAGCTGGACCGAGTGGTCGGGTCGGACCGGGCAGTGACCGAGTCG 89 ************************************************************ consensus_12218#0 GACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCCTGCGCCTCCACCCG 1320 consensus_12218#1 GACGCGTCCAAGCTGGTCTACCTCCAAGCGGTGATCAAAGAGGTCNTGCGCCTCCACCCG 149 ********************************************* ************** consensus_12218#0 CCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTC 1380 consensus_12218#1 CCGGGCCCACTGCTCTCGTGGGCACGCCTCGCCACGTCGGATGTACACGTCGGCGGGTTC 209 ************************************************************ consensus_12218#0 CTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCC 1440 consensus_12218#1 CTCATACCCTCTGGGACCACCGCCATGGTGAACATGTGGGCCATAACCCATGACCCTGCC 269 ************************************************************ consensus_12218#0 GTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGAC 1500 consensus_12218#1 GTTTGGCCCGACCCGAACGAGTTCAAACCAGAGAGGTTCGTCGCAGGGCCCTCGTCGGAC 329 ************************************************************ consensus_12218#0 CAGGCCACGGAGTTTCCGATAATGGGGTCGGATCTCAGGCTCGCGCCGTTCGGGTCAGGA 1560 consensus_12218#1 CAGGCCACGGAGTTTCCGATAATGGGGTCGGATCTCAGGCTCGCGCCGTTCGGGTCAGGA 389 ************************************************************ consensus_12218#0 AGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACG 1620 consensus_12218#1 AGGCGAAGCTGCCCCGGCAAGTCGCTCGCCATCGCCACTGTCGGATTCTGGGTTGCCACG 449 ************************************************************ consensus_12218#0 TTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCG 1680 consensus_12218#1 TTGCTACACGAGTTCGATTGGCTTCCCTTGTCAGATAAGTCGCGCGGCGTCGATCTGTCG 509 ************************************************************ consensus_12218#0 GAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGA 1740 consensus_12218#1 GAGGTGCTGAAGCTGTCGTGCGAGATGGCAACCCCGCTGGAGGCAAGGCTAAGGCCGCGA 569 ************************************************************ consensus_12218#0 CGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCC 1800 consensus_12218#1 CGCAAGGTGTGATGACGTGTCACCACCGTCACGTGGGACTAAGACGAGGAGAGGGAAGCC 629 ************************************************************ consensus_12218#0 GACTTCCACTTCCTTCTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTT 1860 consensus_12218#1 GACTTCCACTTCCTTTTAGTGCTTGTTGAGATGTGTAAATGTCCCTAAATGTAAAGTGTT 689 *************** ******************************************** consensus_12218#0 ACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGT 1920 consensus_12218#1 ACGCTTTGAGTAGAAATGCCCCTACGTTGTAGTGCGTAGTATTGTACACTTGTAGTATGT 749 ************************************************************ consensus_12218#0 AATGCTTGTATTTTTGTGTGTTTTGCACGTCCTAAGTAGTGGAGTAGTAGCTGATAATAG 1980 consensus_12218#1 AATGCTTGTATTTTTGTGTGTTTTGCAAA----AAAAAAAAGA----------------- 788 *************************** ** * ** consensus_12218#0 TTAGTTAATTACTCTGCTATTTAGTCATAGTTAACTACCTACCTGCAGGTGATGAGAGTG 2040 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 ACAGTTTTTTTTTGTTTAATTAACTGCAGGTGATGAGTGTAGAATAGCTCGGTATGCCCA 2100 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 TCTCTATCCTAAGTGCACGCGTGCGTGTGTAATTGTTGTCAGATGTATGTTGTTTTCAAT 2160 consensus_12218#1 ------------------------------------------------------------ consensus_12218#0 GATAATGTACATAATTGGGCCGAAAAAAAAAA 2192 consensus_12218#1 -------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||