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Oryza sativa
cluster # 12222 cluster # 12222       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12222#0 length = 1683 sequences # 6  
consensus_12222#1 length = 772 sequences # 4  

consensusID : consensus_12222#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1683
fasta sequence
                              [CAAAATACTAGCGGCCGCCAAGAAATTCCCCCCCTCTCGCCCTCGCCTTCTCCGAGTTTCCAGCATATGCGCCCCGGATTTTCCTTCAGATTTGCCTAGTTTTTCTCCCTCGCTCTTGACTCGCGATCTCCCGATCTGGAGGAGGGCGGTTGCGGCGGTGGTGTCGTTTGCGGATTGGATTCTTTGTCTGATCTCGCGTGGTGAGGATCTTGTCTGTGTGGATTCGCGGGTTTCTTGGATCGGAAAGGGGGAATGCTGGTATCAATATGCTAGCCCGCGGAGCCGTGCGGTCGCTGTTCGATCGTCTCCGGCCGCCGCCGCATCACCGGAGGAGGAGGAGTAGCCCCGCCGCGATTATGCCGGCCGCCGCCGCCGCCCACCGTGGCTGCTTCTGCAGCCTCAGCCACTCGAATCTGTGCGGGGAGGGCAGTGTGATTCAGAGGAAGGGATTTCTTGATCTTGGGATGGGTCGGAGGTTCGCGCCGGGCAGCGCATTGGGATCCAAGGGATGCCTGAATTGGCAGGATCGGGGTAGATCCAAGAGGGGGGTGGATGGTGGCGAGGCCGTGAGGATCAAGGCGCAGGTTCTGGCGCCGCAGCGGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGAACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGACGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCT-CAACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATGAGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCTTTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGCAAAATCTCTCTTCTTTCTGTAGCTTATCTGTTGTCACATCTCGGCAGGATGCAATTAAAAATCACACATTAGACTGGATCGACAAGTACTATCCAGGGTTATTTGAGCAGATCCATTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTGGTGCTCAGGTTTTGGTAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGATGGCATGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGTTGACGAATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTTCTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTGCAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAAAAAAAAAAAAAA]

[+] EMBL AK103169             [CAAAATACTAGCGGCCGCCAAGAAATTCCCCCCCTCTCGCCCTCGCCTTCTCCGAGTTTCCAGCATATGCGCCCCGGATTTTCCTTCAGATTTGCCTAGTTTTTCTCCCTCGCTCTTGACTCGCGATCTCCCGATCTGGAGGAGGGCGGTTGCGGCGGTGGTGTCGTTTGCGGATTGGATTCTTTGTCTGATCTCGCGTGGTGAGGATCTTGTCTGTGTGGATTCGCGGGTTTCTTGGATCGGAAAGGGGGAATGCTGGTATCAATATGCTAGCCCGCGGAGCCGTGCGGTCGCTGTTCGATCGTCTCCGGCCGCCGCCGCATCACCGGAGGAGGAGGAGTAGCCCCGCCGCGATTATGCCGGCCGCCGCCGCCGCCCACCGTGGCTGCTTCTGCAGCCTCAGCCACTCGAATCTGTGCGGGGAGGGCAGTGTGATTCAGAGGAAGGGATTTCTTGATCTTGGGATGGGTCGGAGGTTCGCGCCGGGCAGCGCATTGGGATCCAAGGGATGCCTGAATTGGCAGGATCGGGGTAGATCCAAGAGGGGGGTGGATGGTGGCGAGGCCGTGAGGATCAAGGCGCAGGTTCTGGCGCCGCAGCGGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGAACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGACGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCT CAACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATGAGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCTTTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGCAAAATCTCTCTTCTTTCTGTAGCTTATCTGTTGTCACATCTCGGCAGGATGCAATTAAAAATCACACATTAGACTGGATCGACAAGTACTATCCAGGGTTATTTGAGCAGATCCATTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTGGTGCTCAGGTTTTGGTAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGATGGCATGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGTTGACGAATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTTCTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTGCAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGG                           ]
[+] EMBL CB679134             [                      AAATCCTCCCCCTCTCGCCCTCGCCTTCTCCGAGTTTCCAGCATATGCGCCCCGGATTTTCCTTCAGATTTGCCTAGTTTTTCTCCCTCGCTCTTGACTCGCGATCTCCCGATCTGGAGGAGGGCGGTTGCGGCGGTGGTGTCGTTTGCGGATTGGATTCTTTGTCTGATCTCGCGTGGTGAGGATCTTGTCTGTGTGGATTCGCGGGTTTCTTGGATCGGAAAGGGGGAATGCTGGTATCAATATGCTAGCCCGCGGAGCCGTGCGGTCGCTGTTCGATCGTCTCCGGCCGCCGCCGCATCACCGGAGGAGGAGGAGTAGCCCCGCCGCGATTATGCCGGCCGCCGCCGCCGCCCACCGTGGCTGCTTCTGCAGCCTCAGCCACTCGAATCTGTGCGGGGAGGGCAGTGTGATTCAGAGGAAGGGATTTCTTGATCTTGGGATGGGTCGGAGGTTCGCGCCGGGCAGCGCATTGGGATCCAAGGGATGCCTGAATTGGCAGGATCGGGGTAGATCCAAGAGGGGGGTGGATGGTGGCGAGGCCGTGAGGATCAAGGCGCAGGTTCTGGCGCCGCAGCGGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGAACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGACGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCTNCAAC AATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB651852             [                                                                                                                                                                                                                                     GTTTCTTGGATCGGAAAGGGGGAATGCTGGTATCAATATGCTAGCCCGCGGAGCCGTGCGGTCGCTGTTCGATCGTCTCCGGCCGCCGCCGCATCACCGGAGGAGGAGGAGTAGCCCCGCCGCGATTATGCCGGCCGCCGCCGCCGCCCACCGTGGCTGCTTCTGCAGCCTCAGCCACTCGAATCTGTGCGGGGAGGGCAGTGTGATTCAGAGGAAGGGATTTCTTGATCTTGGGATGGGTCGGAGGTTCGCGCCGGGCAGCGCATTGGGATCCAAGGGATGCCTGAATTGGCAGGATCGGGGTAGATCCAAGAGGGGGGTGGATGGTGGCGAGGCCGTGAGGATCAAGGCGCAGGTTCTGGCGCCGCAGCGGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGAACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGACGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCT CAACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATGAGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCTTTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGCAAAATCTCTCTTCTTTCTGTAGCTTATCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF322584             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGTTCTGGCGCCGCAGCGGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGAACGGTAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGACGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCT CAACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATGAGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCTTTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGCAAAATCTCTCTTCTTTCTGTAGCTTATCTGTTGTCACATCTCGGCAGGATGCAATTAAAAATCACACATTACACTGGATCGACAAGTACTATCCAGGGTTATTTGAGCAGATCCATTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C97979               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGAACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGACGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCT CAACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATGAGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCTTTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGCAAAATCTCTCTTCTTTCTGTAGCTTATCTGTTGTCACATCTCGGCAGGATGCAATTAAAAATCACACATTAGACTGGATCGACAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C97980               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTCACATCTCGGCAGGATGCAATTAAAAATCACACATTAGACTGGATCGACAAGTACTATCCAGGGTTATTTGAGCAGATCCATTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTGGTGCTCAGGTTTTGATAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGATGGCATGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGTTGACGAATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTTCTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTGCAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAAAAAAAAAAAAAA]


>consensus_12222#0 CAAAATACTAGCGGCCGCCAAGAAATTCCCCCCCTCTCGCCCTCGCCTTCTCCGAGTTTC CAGCATATGCGCCCCGGATTTTCCTTCAGATTTGCCTAGTTTTTCTCCCTCGCTCTTGAC TCGCGATCTCCCGATCTGGAGGAGGGCGGTTGCGGCGGTGGTGTCGTTTGCGGATTGGAT TCTTTGTCTGATCTCGCGTGGTGAGGATCTTGTCTGTGTGGATTCGCGGGTTTCTTGGAT CGGAAAGGGGGAATGCTGGTATCAATATGCTAGCCCGCGGAGCCGTGCGGTCGCTGTTCG ATCGTCTCCGGCCGCCGCCGCATCACCGGAGGAGGAGGAGTAGCCCCGCCGCGATTATGC CGGCCGCCGCCGCCGCCCACCGTGGCTGCTTCTGCAGCCTCAGCCACTCGAATCTGTGCG GGGAGGGCAGTGTGATTCAGAGGAAGGGATTTCTTGATCTTGGGATGGGTCGGAGGTTCG CGCCGGGCAGCGCATTGGGATCCAAGGGATGCCTGAATTGGCAGGATCGGGGTAGATCCA AGAGGGGGGTGGATGGTGGCGAGGCCGTGAGGATCAAGGCGCAGGTTCTGGCGCCGCAGC GGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGA ACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGA CGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCTCA ACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATG AGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCT TTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGC AAAATCTCTCTTCTTTCTGTAGCTTATCTGTTGTCACATCTCGGCAGGATGCAATTAAAA ATCACACATTAGACTGGATCGACAAGTACTATCCAGGGTTATTTGAGCAGATCCATTTTG GAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTG GTGCTCAGGTTTTGGTAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGATGGCA TGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGTTGACG AATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTT CTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAG CAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCA GAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAG AATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTG CAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTA TATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAAAAAAAAAAA AAA



consensusID : consensus_12222#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 772
fasta sequence
                              [TTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTGGTGCTCAGGTTTTGATAGATGACAACCCCA-GATATGCTTTA-GATTGTGCCGAGGATG-GCATGAGGGT-CCTTCTCTTTGA-TTATCACAACT-CGTA-CCCTTGGTGCAAAAC-TGGTGTTGAC-GAATCGCATCCG-CTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTTCTTGGGTAGTACCAGAGTTCTG-ACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTGCAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAATTTGACATGCGTGTGAGCGTGTTAGATCTTTAACTTTCTCGCCTGTGATCTCTCATTCTGCGTTTTTAAGTGTAGATCGGCAAAAGTTGAATCCAGGTCCGGGAGGCTCATGGCTTTGTAACTGGATACGGACAAATATAATACCACCTCCGTTGCAAAAATATACAATATCATTG]

[-] EMBL CB651853             [TTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTGGTGCTCAGGTTTTGATAGATGACAACCCCA GATATGCTTTA GATTGTGCCGAGGATG GCATGAGGGT CCTTCTCTTTGA TTATCACAACT CGTA CCCTTGGTGCAAAAC TGGTGTTGAC GAATCGCATCCG CTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTTCTTGGGTAGTACCAGAGTTCTG ACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTGCAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAATTTGACATGCGTGTGAGCGTGTTAGATCTTTAACTTTCTCGCCTGTGATCTCTCATTCTGCGTTTTTAAGTGTAGATCGGCAAAAGTTGAATCCAGGTCCGGGAGGCTCATGGCTTTGTAACTGGATACGGACAAATATAATACCACCTCCGTTGCAAAAATATACAATATCATTG]
[-] EMBL CA763321             [                                                                                           CCCACAATATGCCTTACGCATGTGCCCAGGACGCGCATGAGGGTCCCTTCTCTTTGATTTCTCCCACCTCCGTACCCCTTGCTGCAGAACTTGGTGTTCACGGGGTCGCATCCGCCTGGTGACCAAGGTTCCCAATGGGCAAGTAGTTGAGGAAAAGCTTCTTTCTTGGGTAGTCCCAGAGTTCTGAACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAAAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTGCAATGTTGACGACTGAAACCGTCTGCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAATTTGACATGCGTGTGAGCGTGTTAGATCTTTAACTTTCTCGCCTGTGATCTCTCATTCTGCGTTTTTAAGTGTAGATCGGCAAAAGTTGAATCCAGGTCCGGGAGGCTCATGGCTTTGTAACTGGATACGGACAAATATAATACCACCTCCGTTGCAAAAAaaaa           ]
[+] EMBL AA750205             [                                                                                                                                                                                                                                                                                                   TAGGAGACGCACCATTTGAGAGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGSTCTGGAA                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AA750155             [                                                                                                                                                                                                                                                                                                                         CAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAGAATGAAGGTCTGGAAGGCTCC                                                                                                                                                                                                                                                                                                                                      ]


>consensus_12222#1 TTTTGGAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATC TTTTGGTGCTCAGGTTTTGATAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGA TGGCATGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGT TGACGAATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCT TCTTTCTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAG AGCAGCAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTA TGTCAGAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGT TGCAGAATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGA ATTTGCAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGG GTGTATATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAATTTG ACATGCGTGTGAGCGTGTTAGATCTTTAACTTTCTCGCCTGTGATCTCTCATTCTGCGTT TTTAAGTGTAGATCGGCAAAAGTTGAATCCAGGTCCGGGAGGCTCATGGCTTTGTAACTG GATACGGACAAATATAATACCACCTCCGTTGCAAAAATATACAATATCATTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12222#0      CAAAATACTAGCGGCCGCCAAGAAATTCCCCCCCTCTCGCCCTCGCCTTCTCCGAGTTTC 60
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      CAGCATATGCGCCCCGGATTTTCCTTCAGATTTGCCTAGTTTTTCTCCCTCGCTCTTGAC 120
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      TCGCGATCTCCCGATCTGGAGGAGGGCGGTTGCGGCGGTGGTGTCGTTTGCGGATTGGAT 180
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      TCTTTGTCTGATCTCGCGTGGTGAGGATCTTGTCTGTGTGGATTCGCGGGTTTCTTGGAT 240
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      CGGAAAGGGGGAATGCTGGTATCAATATGCTAGCCCGCGGAGCCGTGCGGTCGCTGTTCG 300
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      ATCGTCTCCGGCCGCCGCCGCATCACCGGAGGAGGAGGAGTAGCCCCGCCGCGATTATGC 360
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      CGGCCGCCGCCGCCGCCCACCGTGGCTGCTTCTGCAGCCTCAGCCACTCGAATCTGTGCG 420
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      GGGAGGGCAGTGTGATTCAGAGGAAGGGATTTCTTGATCTTGGGATGGGTCGGAGGTTCG 480
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      CGCCGGGCAGCGCATTGGGATCCAAGGGATGCCTGAATTGGCAGGATCGGGGTAGATCCA 540
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      AGAGGGGGGTGGATGGTGGCGAGGCCGTGAGGATCAAGGCGCAGGTTCTGGCGCCGCAGC 600
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      GGCAGCTGCTCCATGACCCGGAGGTTCTGCCATTGGAGGAGGTTGCCACGAAGAGCTTGA 660
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      ACGGGAATGGCGCGTGCCGGCGTGGGAAGCCGCTGGGTTTCCCCGAGAACGCTGCGCCGA 720
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      CGAAGATGGTGGTTGCTGTTGATGTGGATGAAGTTCTTGGAAGCTTTCTTGCTGCTCTCA 780
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      ACAAATTTATTGCGGACCGTTATTCTTTGAATCACTCAGTATCAGAATACCATGTGTATG 840
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      AGTTCTTCAAGATATGGAATTGTTCTCGAGAAAGAGCTAATTTTCTTGTCCATGAGTTCT 900
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      TTACAACCCATTACTTCCAAGATGGTATACATCCTATCCCCGGTGCCCGAGATGCTCTGC 960
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      AAAATCTCTCTTCTTTCTGTAGCTTATCTGTTGTCACATCTCGGCAGGATGCAATTAAAA 1020
consensus_12222#1      ------------------------------------------------------------
                                                                                   

consensus_12222#0      ATCACACATTAGACTGGATCGACAAGTACTATCCAGGGTTATTTGAGCAGATCCATTTTG 1080
consensus_12222#1      -------------------------------------------------------TTTTG 5
                                                                              *****

consensus_12222#0      GAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTG 1140
consensus_12222#1      GAAACCATTTTGCTTTGCAAGGTCAATCAAAGCCAAAATCAGAAATTTGCAGATCTTTTG 65
                       ************************************************************

consensus_12222#0      GTGCTCAGGTTTTGGTAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGATGGCA 1200
consensus_12222#1      GTGCTCAGGTTTTGATAGATGACAACCCCAGATATGCTTTAGATTGTGCCGAGGATGGCA 125
                       ************** *********************************************

consensus_12222#0      TGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGTTGACG 1260
consensus_12222#1      TGAGGGTCCTTCTCTTTGATTATCACAACTCGTACCCTTGGTGCAAAACTGGTGTTGACG 185
                       ************************************************************

consensus_12222#0      AATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTT 1320
consensus_12222#1      AATCGCATCCGCTGGTGACCAAGGTTCACAATTGGCAAGAAGTTGAGGAAAAGCTTCTTT 245
                       ************************************************************

consensus_12222#0      CTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAG 1380
consensus_12222#1      CTTGGGTAGTACCAGAGTTCTGACACTTGATTCGGTAGGAGACGCACCATTTGAGAGCAG 305
                       ************************************************************

consensus_12222#0      CAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCA 1440
consensus_12222#1      CAGATGTCTCGGTAGACTTTGATTTCTGAAGAAACATGTTCAACCCATTCCAGTATGTCA 365
                       ************************************************************

consensus_12222#0      GAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAG 1500
consensus_12222#1      GAGTTAAATAGGATCTACAACATCCCTAGGCAAAGACTGGCAGAATGAACGTTGTTGCAG 425
                       ************************************************************

consensus_12222#0      AATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTG 1560
consensus_12222#1      AATGAAGGTCTGGAAGGCTCCAGTTTTAGTATGTCTCCCATGTGATTCAAGACGAATTTG 485
                       ************************************************************

consensus_12222#0      CAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTA 1620
consensus_12222#1      CAATGTTGACGACTGAAACCGTCTTCACTCTTCAGTTCTTTTACCCTGCTGTGGGGTGTA 545
                       ************************************************************

consensus_12222#0      TATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAAAAAAAAAAA 1680
consensus_12222#1      TATATTGACACTGCTATAACCTCAATGAATTTGGGGAACGCTTCATATAAATTTGACATG 605
                       ***************************************************    * *  

consensus_12222#0      AAA--------------------------------------------------------- 1683
consensus_12222#1      CGTGTGAGCGTGTTAGATCTTTAACTTTCTCGCCTGTGATCTCTCATTCTGCGTTTTTAA 665
                                                                                   

consensus_12222#0      ------------------------------------------------------------
consensus_12222#1      GTGTAGATCGGCAAAAGTTGAATCCAGGTCCGGGAGGCTCATGGCTTTGTAACTGGATAC 725
                                                                                   

consensus_12222#0      -----------------------------------------------
consensus_12222#1      GGACAAATATAATACCACCTCCGTTGCAAAAATATACAATATCATTG 772
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)