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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12225#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 502 fasta sequence
[CCGCNAAGAAGGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGGAGGNTCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG-NGGCGAGGCCGTCGGCG-CCGACGACGG-A-CAGG-CCGCTGTGGTTCCCCGGCGCGGTGGCG-CGGANC-TACCTGGACGGGTCGC-TCGTCGGCGAC-TACGGC-TTCGA-CCCG-TTCGG-CC-TCGGGAAGCC--GGC-GG-AGTACC-TGC-AG-TTCGAGC-TGGAC-TCGCTGG-ACCAG-AACCT-GGCCAAGAACAACGCCGGCGAGATCATCGGCACCCGG-TTCGAGACCGGCGAGGTGAAGTCCACCCCGTTCCAGCCCTACACCGAGGTGTTCGGCCTCCAGCGCTTCC-GCGATTCAACTTATCACGGCCGTTGGCATNTTGCACCTTGGGGCTTTCGTGATTGTAACGGGT]
[+] EMBL OSS11202A [CCGCGAAGAAGGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGTGAGGNTCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG NGGCGAGGCCGTCGGCG CCGACGACGGTA CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG CGAACT TACCTGGACGGNTCGCTTCGTCGGCGACTTACGGCTTTCGA CCCGTTTCGGNCT TCGGGAAGCC GGC GGNANTACCTTGC AA TTCGAGCTTGGAC ]
[+] EMBL OSS12246A [CCG NAAGAAGGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGC GGAGGNTCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG CGGCGAGGCCGTCGGCG CCGACGACGG A CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG NCAACT TACCTGGACGGNTCGC TCGTCGGCGAT TACGGN TTCGA CCCG TTCGG CC TCGGGAAGCC GGC GG AGTANC TTCAAT TTCGAGC TTGACTTCCTTGG ACCAA AACCT TGNCAAGAA ]
[+] EMBL OSS11271A [CCGCNAAGAAGGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGNGAGGNTCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG NGGCGAGGCCGTCGGCG CCGACGACGG A CANG CCGCTTTNGTTCCCCGGCGCGGTTGCG CGGACT TACCTNGACGGGTCGC TCGTCGGCGA ]
[+] EMBL OSS12554A [ AGAAGGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGNAGGNTCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGNGGCGGCGAAGAAGGTAGGCGAGGCCGTCGGCG CCGACGACGGAA CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG C CANCTTACCTGGACGGNTCGN TCGTCGGCGAC TACGGT TTCGA CCCG TTCGG CC TC ]
[+] EMBL AU063934 [ AGAAGGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGNAGGATCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG CGGCGAGGCCGTCGGCG CCGACGACGGAA CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG CGGAACTTACCTGGACGGGTCGC TCGTCGGCGAC TACGGC TTCGA CCCG TTCGG CC TCGGGAAGCC GGC GG AGTACC TGN AG TTCGAGT TGGAC TCGNTGG ACAAG A CT GGCCAAGAACAACGCCGGCGA ATTATNGGAACCCGT TTna ]
[+] EMBL OSS11351A [ GGAGAAGAAGGAGAGGAGCAGCCATGGCGTCGCCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGC GGAGGATCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG CGGCGAGGCCGTCGGCG CCGACGACGT A CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG C GANCTTACCTGGACGGGTCGN TCGTCGGCGAC TACGGC TTCGA CCCG TTCGN CC TCGGGAAGCC GGC GG AGTACC TGC AA TTCGAGT TGGAN TNGTTTG ACCAG AACTT TGCCAAGAACAACGGCG ]
[+] EMBL AU174047 [ AGAAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGGAGGATCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG CGGCGAGGCCGTCGGCGCCCGACGACGG A CAGGCCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGA C TACCTGGACGGGTCGC TCGTCGGCGAC TACGGCTTTCGACCCCT TTCGG CCTTCGGGAAACCCGGGCGGG AGTACCTTGC AGTTTCGAGCTTGGACTTCGCTGGAACCAGAAACCTGGGCCAAGAACAACGCCGGCGAGATCATCGGCACCCGGTTTCGAGACCGGCGAGGTGAAGTCCACCCCGTTCCAGCCCTACACCGAGGTGTTCGGCCTCCAGCGCTTCC GCGA ]
[+] EMBL OSS12122A [ AAGAAGGAGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGTGAGGTTCGTGGCGAGGTTCGGNTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG NGGCGAGGCCGTCGGCG CCGACGACGG A CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG CGAANN TACCTGGACGNTTCGC TCNTNGGCGAC TACGGC TTCNA CCCG ]
[+] EMBL OSS12176A [ AGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGGAGGATCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGG NGGCGAGGCCGTCGGCG CCGACGACGG A CAGG CCGCTGTGGTTCCCCGGCGCGGTGGCG CGNANC TACCTGGACGGGTCGC TCGTCGGCGAC TACGGC TTCGA CCCG TTCGG CC TCGGGAAGCC GGC GG AGTACC TGC AG TTCGAGC TGGAC TCGCTGG ACCAG AACCT GGCCAAGAACAACGCCGGCGAGATCATCGGCACCCGG TTCGAGACCNGCGAGGTGAAGTTCACCCCGTTTCAAGCCTACAACGAGGTGTTCGGCCTTCANCGCTTCCNGAG TTCAACTTATCACGGCCGTTGGCATNTTGCACCTTGGGGCTTTCGTGATTGTAACGGGT]
[+] EMBL OSS11963A [ AGAGGAGCAGCCATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGNGCCGCAGAG GGNAGGNTCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGN NGGCGAGGCCGTCGGCG CCGACGACGN ACCAGG CCGCTGTGGTTCCCCGNCGCGGTGGCN C ANCTTACCTGGACGGNTCGC TCGTCGGCGAC TACGGC TTCGA CCCG TTCGG CC TCGGGAAGCC GGC GG AGTACC TNC AN TTCGAGC TGGAC TNGCTNG ACCAA AACCT NGCCAAGAACAACG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||