These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12236#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1795 fasta sequence [GCACATTCGCACTCGTCTCGTCTTACTCACCCCGCACGTTTCCACTTCCCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCGCGCGAGAGGGTCCCATCCCCGACTTCGCCGCCATGGCCGGCGCTCCCCCGACGGAGGCGGAGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCGGCGGCGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTA-GGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGAGGACGGG-GATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGATCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTCCAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCAGTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAAATCT] [+] EMBL AK073170 [GCACATTCGCACTCGTCTCGTCTTACTCACCCCGCACGTTTCCACTTCCCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCGCGCGAGAGGGTCCCATCCCCGACTTCGCCGCCATGGCCGGCGCTCCCCCGACGGAGGCGGAGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCGGCGGCGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTA GGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGAGGACGGG GATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGATCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTCCAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCAAGTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAAATCT] [+] EMBL C27202 [ TCGTCTTACTCACCCCGNACGTTTCCACTTCCCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGNCGCGCGCGAGAGGGTCCCATCCCCGACTTCGCCGNCATNGCCGNCGNTCCCCCGACGGAGGCGGAGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGNCGTCGGNCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGNTGGCATCTGGAGGAGGCGTTGNAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGc ] [+] EMBL AA750111 [ CCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCG GCGAGAGGGTCCCATCCCCGACTTCGCCGCCATGGCCGG GCTCCCCCGACGGAGGC GAGAAGGCTTTCCTCGT ACCTCCTTCCT GAGATC ] [+] EMBL CF326572 [ AGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCCGCGGCGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCG CAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTA ] [+] EMBL BP185013 [ acgagGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAA ] [+] EMBL AK072097 [ TTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTA GGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGGGGACGGG GATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGATCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTCCAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCAGTTCTCTTTTAATGCATATAATATT ] [+] EMBL CF324455 [ GATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCG ] [+] EMBL CF322767 [ TGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTAGGGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGAGGACGGGNGATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGA ] [+] EMBL BE230695 [ cgtgCCGAATTCTGCACGA GTAAAGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAACTCAACCTCAAAAACGGCCAAGAAAAGTTGATCA AAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCT ] [-] EMBL AU225367 [ ccgcTTTTTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCAGTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAgcggc] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||