These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12242#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3341 fasta sequence [CTAGAAACTGTTACATTATCTAAGCTAGCCGCTGAGGAAAGAGCTGNCCATCTGGATGGTGCTCTCAAGGAATGTATGAAGCAAGTGAGGACAGTNAAGGAGGAAAGCGAGCAAAAGCTGCAAGATGTTGTCTTTGCAAAAACCAAGCAGTGGGAGATGATGAAGGCCGAACTAGAAGCAAAATTAGCTTCTTTTGAACATGAGCTTATTAGAGCAGGTGCTGAGAATGACGCACTCTCAAGATCTCTTGAAGAGCGGGAACACTTAATGATGAAGGTTGGTGGGGAAAAAGAGCAAGCAGAATCTCAGATCG-AGTGTTGAAAGGCACTATTCAATCTNGTGAAAAAGAG-TTAGTTCATTGAAGTTTGAACTACATGTTCTTTCCAAAGAATTTGAAATTCGCAATGAAGAAAAGAACATGAGTGTGCGTTCAGCTGATGTAGCAACCAAGCAACATGTAGAGGATGTCAAGAAAATATCAAAACTGGAAGCGGAGTGCCAAAGGTTACGTGGTCTTGTTCGGAAAAAGTTACCCGGGCCAGCTGCATTAGCTCAAATGAAGCTGGAAGTGGATAGCTGGGGCAGAGACCATGCTGATAACAGATTGCGACGCTCCCCTTCAAGGAGTTCTAATTTCCATCATCCTTTGTCACCATCCCCTGATAATTCTCTTGAAAACTTGCAGCACATGCAGAAAGAGAATGAATTTCTGACTGCACGCTTGTTATCGATGGAGGATGAAACAAAGATGTTAAAAGAGGCGCTGTCAAAGCGTAATAATGAGTTGCAGGTGTCAAGAAACACATGTGCTAAGACAGCAGGCAAGCTCCGCAGCATGGATGTTCATATGGTGAGTGCTAGGCAGTATAAGAATCCAACAAATTCAAACCTTGATGTTCACCATGATGGTGCACTGAGCCTGAATGGAAGTAACCCACCAAGTCTGACTTCCATGTCCGAAGACGGAGTTGATGATGCAACAAGTTGTGCCGAATCTTGGGCCAATGCTTTGATATCTGAGCTCTCACACATCAAGAAAGATAATGGAGGTAAGGGCAGTTTGACAGAAAATTCCAATCAGATGGTACTCATGGATGACTTTCTAGAGATGGAGAGGTTGGCGTGTTTATCTCCTGAAGGAAAAGAATGTGGAAGCTTTATTGACAAGAAGAAGGCCACTAAAGTTCACACAACTCTCACTACCATCACTAAACGGGAAAGTGATAGAGATTCATGGCCATCCTCGCAGTTCCCAGATACACCATCCAGCAGTGAGCATCTGCCTGAGAACTCCCCACTTTCAAAATTGCACTCAAGAATTTCTTCTCTCTTAGGTTCTCATTCACCACAGAACAATGTTGGCAAGGTCCTAGAGGGTATCAGAAATATCCTAAGAGATATCAAGGAAGAAGCAGAATCAGTGAGTGCAAAAAAAAGAATCAGCCTGATAACATGAATGGACTTGCTGATAATGGATCTTTGACAAAGCAATCCAAGAACCTGAGGGATGTGGATCATGGTCTAAGACATGCTATTTTGGAAATTCTTGATTTTTTCCAGCCATTTAAAAGACAACTATCTGAGGTCCAAGGTAAAAGTTCCCACCAAAACACAATCCTTGAGAAAATAGAAAAGTTCTCCACTATAGCTGACAAAGTTGTGCTAAACGAAAATGCTCTTGCCGAAATGGTGATTGCATTAGCGGAAATTTTGGCAGGAAATTCTGCTATTAAACTCACATTGCCGAGAGACAGCATCACTGAAACCGAGAGCAATAATCTGGACTATGTTGATAAAGTGACCTTATTGGAAAACAAAGTGCATCATGAGCCAATTAAAGATAGCCTTGCTGATATTTGTTCACTTGCGCCTCATTCGTCTTCTGATCCTGACTTTGAGGGTTCTAGGGATGCATTTGTTGTCAAAACCACAGTGCAGATGTGCTCAATGGAGGAATATGAACAACTGAAATCGGAGAAGAGGAAATTGGAGATGGAATTAGCAAAGTGCAATGAAACTATCGAATGTAGAAAGCTTGAGTTTAGTCTGATGGAGAAAAACATGGAAGAGCTTACGTCAAAGTTATCTGCATGCGAGAAATCGAATAGCTTGACTGAGACACAGCTGAAGTGTATGGCTGAATCATACAAATCACTTGAGTTACACAAGTTGAAATTAGAAAGTGAAATAGAAGTTATGCATAGACAAATAAATACTTTGAGAACTGAACTTGCTGATGAAAGACAAAACCATCAGGACGATTTGGCGAAGTACAGAGATCTTAAGGAGAAGATTGAAAGGTATG-AGAATGAGAAGAATACTTCATCTGTAGATGAGGATGCAGGTGTTAAAATAAAGCAGGACAAAGAGATCGCAGCAGCAGCAGAGAAGCTTGCAGAATGCCAGGAGACAATATTGCTTCTTGGCCGTCAGCTGCAGACTCTTCGCCCCCCTCCAGCAGAACCACTGGGTTCTGTGTTAAACCAACAACCTGTGGGGGTGTTTTCTGAAGATCAAGCTAGAACAACCCAAGGCTTGCATTTTAAGAAGCTGTCAGGTCAATTTGATACAGATCACACATTCTCAAGTGCACCGGGAACAGGAAACGTATCTCCGCTAAATGGATATAGAACACACAAAAGCCCCTCCAATCTTGATGGAAACACTTACTTCGCTTCTCCAAACAACTCCAAGCGTCCAAAGCACAGATCAAGGTCTTCTTCCTCTTCCTCATTTACTAACCAGTTCACAGAGAAACAGAGCCGAGGTTTCAGTCGGTTATTTTCGAAGAGCAAGAGCGAATACTAACCGACTTTTGAGCTTGTTTTGCTTGTCGTGGCAAGCACTGCAGGTGTATATTTTTGCCAAC-AAAACCTACCACCTATTTGTGTATTATGTA-GATGATGCCTGCACTTACCAGATTCTAGTAGTTTTTGCTTGAGATTTTAGCTGTAT-CCATATT-CAGTGTGGTTGTCAGCCGTCAGTACTAAGAACCATCCTTTGCCCTGGATTTTTTTGGGTTGCTGTTACTGCTTATACCTCATGGAACCTCACTGTAAATTTGCCTAGCTACCTCGATGAAGATTGAGAAGGTAATGTTGTTAGCGTGAAGAGATTTCTCTTGCCAAGGTTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTAGTTCTCTGTACAGATAACCTGAAAAAAGTTTGGAGTTTGCTGTCAAGTTTTTGATTGTAAAGTATTTGGATACTCTGTGTGCTAACAGTTTGGAATGTAATGTGTTGCCCCAGTTCAAACAATATCAGTTTTATGCTGCAACCGAGTTCAGTTTTGTNTATAAAAAAAAAAAAAAA] [+] EMBL OSC104471 [CTAGAAACTGTTACATTATCTAAGCTAGCCGCTGAGGAAAGAGCTGNCCATCTGGATGGTGCTCTCAAGGAATGTATGAAGCAAGTGAGGACAGTNAAGGAGGAAAGCGAGCAAAAGCTGCAAGATGTTGTCTTTGCAAAAACCAAGCAGTGGGAGATGATGAAGGCCGAACTAGAAGCAAAATTAGCTTCTTTTGAACATGAGCTTATTAGAGCAGGTGCTGAGAATGACGCACTCTCAAGATCTCTTGAAGAGCGGGAACACTTAATGATGAAGGTTGGTGGGGAAAAAGAGCAAGCAGAATCTCAGATCG AGTGTTGAAAGGCACTATTCAATCTNGTGAAAAAGAG TTAGTTCATTGAAGTTTGAACTA ] [+] EMBL AK064809 [ GGAGGAAAGCGAGCAAAAGCTGCAAGATGTTGTCTTTGCAAAAACCAAGCAGTGGGAGATGATGAAGGCCGAACTAGAAGCAAAATTAGCTTCTTTTGAACATGAGCTTATTAGAGCAGGTGCTGAGAATGACGCACTCTCAAGATCTCTTGAAGAGCGGGAACACTTAATGATGAAGGTTGGTGGGGAAAAAGAGCAAGCAGAATCTCAGATCGAAGTGTTGAAAGGCACTATTCAATCTGGTGAAAAAGAGATAAGTTCATTGAAGTATGAACTACATGTTCTTTCCAAAGAATTTGAAATTCGCAATGAAGAAAAGAACATGAGTGTGCGTTCAGCTGATGTAGCAACCAAGCAACATGTAGAGGATGTCAAGAAAATATCAAAACTGGAAGCGGAGTGCCAAAGGTTACGTGGTCTTGTTCGGAAAAAGTTACCCGGGCCAGCTGCATTAGCTCAAATGAAGCTGGAAGTGGATAGCTGGGGCAGAGACCATGCTGATAACAGATTGCGACGCTCCCCTTCAAGGAGTTCTAATTTCCATCATCCTTTGTCACCATCCCCTGATAATTCTCTTGAAAACTTGCAGCACATGCAGAAAGAGAATGAATTTCTGACTGCACGCTTGTTATCGATGGAGGATGAAACAAAGATGTTAAAAGAGGCGCTGTCAAAGCGTAATAATGAGTTGCAGGTGTCAAGAAACACATGTGCTAAGACAGCAGGCAAGCTCCGCAGCATGGATGTTCATATGGTGAGTGCTAGGCAGTATAAGAATCCAACAAATTCAAACCTTGATGTTCACCATGATGGTGCACTGAGCCTGAATGGAAGTAACCCACCAAGTCTGACTTCCATGTCCGAAGACGGAGTTGATGATGCAACAAGTTGTGCCGAATCTTGGGCCAATGCTTTGATATCTGAGCTCTCACACATCAAGAAAGATAATGGAGGTAAGGGCAGTTTGACAGAAAATTCCAATCAGATGGTACTCATGGATGACTTTCTAGAGATGGAGAGGTTGGCGTGTTTATCTCCTGAAGGAAAAGAATGTGGAAGCTTTATTGACAAGAAGAAGGCCACTAAAGTTCACACAACTCTCACTACCATCACTAAACGGGAAAGTGATAGAGATTCATGGCCATCCTCGCAGTTCCCAGATACACCATCCAGCAGTGAGCATCTGCCTGAGAACTCCCCACTTTCAAAATTGCACTCAAGAATTTCTTCTCTCTTAGGTTCTCATTCACCACAGAACAATGTTGGCAAGGTCCTAGAGGGTATCAGAAATATCCTAAGAGATATCAAGGAAGAAGCAGAATCAGTGAGTGCAAAAAAAAGAATCAGCCTGATAACATGAATGGACTTGCTGATAATGGATCTTTGACAAAGCAATCCAAGAACCTGAGGGATGTGGATCATGGTCTAAGACATGCTATTTTGGAAATTCTTGATTTTTTCCAGCCATTTAAAAGACAACTATCTGAGGTCCAAGGTAAAAGTTCCCACCAAAACACAATCCTTGAGAAAATAGAAAAGTTCTCCACTATAGCTGACAAAGTTGTGCTAAACGAAAATGCTCTTGCCGAAATGGTGATTGCATTAGCGGAAATTTTGGCAGGAAATTCTGCTATTAAACTCACATTGCCGAGAGACAGCATCACTGAAACCGAGAGCAATAATCTGGACTATGTTGATAAAGTGACCTTATTGGAAAACAAAGTGCATCATGAGCCAATTAAAGATAGCCTTGCTGATATTTGTTCACTTGCGCCTCATTCGTCTTCTGATCCTGACTTTGAGGGTTCTAGGGATGCATTTGTTGTCAAAACCACAGTGCAGATGTGCTCAATGGAGGAATATGAACAACTGAAATCGGAGAAGAGGAAATTGGAGATGGAATTAGCAAAGTGCAATGAAACTATCGAATGTAGAAAGCTTGAGTTTAGTCTGATGGAGAAAAACATGGAAGAGCTTACGTCAAAGTTATCTGCATGCGAGAAATCGAATAGCTTGACTGAGACACAGCTGAAGTGTATGGCTGAATCATACAAATCACTTGAGTTACACAAGTTGAAATTAGAAAGTGAAATAGAAGTTATGCATAGACAAATAAATACTTTGAGAACTGAACTTGCTGATGAAAGACAAAACCATCAGGACGATTTGGCGAAGTACAGAGATCTTAAGGAGAAGATTGAAAGGTATG AGAATGAGAAGAATACTTCATCTGTAGATGAGGATGCAGGTGTTAAAATAAAGCAGGACAAAGAGATCGCAGCAGCAGCAGAGAAGCTTGCAGAATGCCAGGAGACAATATTGCTTCTTGGCCGTCAGCTGCAGACTCTTCGCCCCCCTCCAGCAGAACCACTGGGTTCTGTGTTAAACCAACAACCTGTGGGGGTGTTTTCTGAAGATCAAGCTAGAACAACCCAAGGCTTGCATTTTAAGAAGCTGTCAGGTCAATTTGATACAGATCACACATTCTCAAGTGCACCGGGAACAGGAAACGTATCTCCGCTAAATGGATATAGAACACACAAAAGCCCCTCCAATCTTGATGGAAACACTTACTTCGCTTCTCCAAACAACTCCAAGCGTCCAAAGCACAGATCAAGGTCTTCTTCCTCTTCCTCATTTACTAACCAGTTCACAGAGAAACAGAGCCGAGGTTTCAGTCGGTTATTTTCGAAGAGCAAGAGCGAATACTAACCGACTTTTGAGCTTGTTTTGCTTGTCGTGGCAAGCACTGCAGGTGTATATTTTTGCCAAC AAAACCTACCACCTATTTGTGTATTATGTA GATGATGCCTGCACTTACCAGATTCTAGTAGTTTTTGCTTGAGATTTTAGCTGTAT CCATATT CAGTGTGGTTGTCAGCCGTCAGTACTAAGAACCATCCTTTGCCCTGGATTTTTTTGGGTTGCTGTTACTGCTTATACCTCATGGAACCTCACTGTAAATTTGCCTAGCTACCTCGATGAAGATTGAGAAGGTAATGTTGTTAGCGTGAAGAGATTTCTCTTGCCAAGGTTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTAGTTCTCTGTACAGATAACCTGAAAAAAGTTTGGAGTTTGCTGTCAAGTTTTTGATTGTAAAGTATTTGGATACTCTGTGTGCTAACAGTTTGGAATGTAATGTGTT ] [+] EMBL AU108646 [ TCAAAATTGCACTCAAGAATTTCTNCTNTNTTAGGTTCTCATTCACCACAGAACAATGTTGGCAAGGTCCTAGAGGGTATCAGAAATATCCTAAGAGATATCAAGGAAGAAGCAGAATCAGTGAGTGC AAAAAAGAATCAGCCTGATAACATGAATGGACTTGCTGATAATGGATCTTTGACAAAGCAATCCAAGAACCTGAGGGATGTGGATCATGGTCTAAGACATGCTATTTTGGAAATTCTTGATTTTTTCCAGCCATTTAAAAGACAACTATCTGAGGTCCAAGGTAAAAGTTCCCACCAAAACACAATCCT ] [+] EMBL CF322833 [ TAAGACATGCTATTTTGGAAATTCTTGATTTTTTCCAGCCATTTAAAAGACAACTATCTGAGGTCCAAGGTAAAAGTTCCCACCAAAACACAATCCTTGAGAAAATAGAAAAGTTCTCCACTATAGCTGACAAAGTTGTGCTAAACGAAAATGCTCTTGCCGAAATGGTGATTGCATTAGCGGAAATTTTGGCAGGAAATTCTGCTATTAAACTCACATTGCCGAGAGACAGCATCACTGAAACCGAGAGCAATAATCTGGACTATGTTGATAAAGTGACCTTATTGGAAAACAAAGTGCATCATGAGCCAATTAAAGATAGCCTTGCTGATATTTGTTCACTTGCGCCTCATTCGTCTTCTGATCCTGACTTTGAGGGTTCTAGGGATGCATTTGTTGTCAAAACCACAGTGCAGATGTGCTCAATGGAGGAATATGAACAACTGAAATCGGAGAAGAGGAAATTGGAGATGGAATTAGCAAAGTGCAATGAAACTATCGAATGTAGAAAGCTTGAGTTTAGTCTG ] [+] EMBL BP184408 [ TTGTTGTCAAAACCACAGTGCAGATGTGCTCAATGGAGGAATATGAACAACTGAAATCGGAGAAGAGGAAATTGGAGATGGAATTAGCAAAGTGCAATGAAACTATCGAATGTAGAAAGCTTGAGTTTAGTCTGATGGAGAAAAACATGGAAGAGCTTACGTCAAAGTTATCTGCATGCGAGAAATCGAATAGCTTGACTGAGACACAGCTGAAGTGTATGGCTGAATCATACAAATCACTTGAGTTACACAAGTTGAAATTAGAAAGTGAAATAGAAGTTATGCATAGACAAATAAATACTTTGAGAACTGAACTTGCTGATGAAAGACAAAACCATCAGGACGATTTGGCGAAGTACAGAGATCTTAAGGAGAAGATTGAAAGGTATGAAGAATGAGAAGAATACTTCATCTGTAGATGAGGATGCAGGTGTTAAAATAAAGCAGGACAAAGAGATCGCAGCAGCAGCAGAGAAGCTTGCAGAATGCCAGGAGACAATATTGCTTCTTGGCCGTCAGCTGCAGACTCTTCG CCCCCTTCAGCAGAACCACTGGGTTCTGTG TAAACCAACAACCTGTGGGGGTGTTTTCTGAAGATCAAGCTTGAACAACCCAAGGCTTGCATTTTAAGAAGCTGTCAGGTCAATTTGAT CAGATCACACATTCT ] [+] EMBL BP185032 [ acGAGGCACAGCTGAAGTGTATGGCTGAATCATACAAATCACTTGAGTTACACAAGTTGAAATTAGAAAGTGAAATAGAAGTTATGCATAGACAAATAAATACTTTGAGAACTGAACTTGCTGATGAAAGACAAAACCATCAGGACGATTTGGCGAAGTACAGAGATCTTAAGGAGAAGATTGAAAGGTATG AGAATGAGAAGAATACTTCATCTGTAGATGAGGATGCAGGTGTTAAAATAAAGCAGGACAAAGAGATCGCAGCAGCAGCAGAGAAGCTTGCAGAATGCCAGGAGACAATATTGCTTCTTGGCCGTCAGCTGCAGACTCTTCGCCCCCCTCCAGCAGAACCACTGGGTTCTGTGTTAAACCAACAACCTGTGGGGGTGTTTTCTGAAGATCAAGCTAGAACAACCCAAGGCTTGCATTTTAAGAAGCTGTCAGGTCAATTTGATACAGATCACACATTC ] [+] EMBL OSS2348A [ ACCGGGAACAGGAAACGTATCTCCGCTAAATGGATATAGAACACACAAAAGCCCCTCCAATCTTGATGGAAACACTTACTTCGCTTCTCCAAACAACTCCAAGCGTCCAAAGCACAGATCAAGGTCTTCTTCCTCTTCCTCATTTACTAACCAGTTCACAGAGAAACAGAGCCGAGGTTTCAGTCGGTTATTTTCGAAGAGCAAGAGCGAATACTAACCGACTTTTGAGCTTGTTTTGCTTGTCGTGGCAAGCACTGCAGGTGTATATTTTTGCCAAC AAAACCTACCACCTATTTGTGTATTATGTAGGATGATG ] [+] EMBL AU033064 [ TTGAGCTTGTTTTGCTTGCCGTGGCAAGCACTGCAGGNGTATATTTTTGCCAACAAAAACCTACCACCTATTTGTGTATTATGTA GATGATGCCTGCACTTACCAGATTCTAGTAGTTTTTGCNNGAGATTTTANCTGTATCCCATATTACAGTGTGGTTGTCAGCCGTCAGTACTAAGAACCATCCTTTGCCCTGGATTTTTTTGGGTTGCTGTTACTGCTTATACCTCATGGAACCTCACTGTAAATTTGCCTAGCTACCTCGATGAAGATTGAGAAGGTAATGTTGTTAGCGTGAAGAGATTTCTCTTGCCAAGGTTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTAGTTCTCTGTACAGATAACCTGAAAAAAGTTTGGAGTTTGCTGTCAAGTTTTTGATTGTAAAGTATTTGGATACTCTGTGTGCTAACAGTTTGGAATGTAATGTGTTGCCCCAGTTCAAACAATATCAGTTTTATGCTGCAACCGAGTTCAGTTTTGTNTATAAAAAAAAAAAAAAA] [+] EMBL AU108645 [ GTACTAAGAACCATCCTTTGCCCTGGATTTTTTTGGGTTGCTGTTACTGCTTATACCTCATGGAACCTCACTGTAAATTTGCCTAGCTACCTCGATGAAGATTGAGAAGGTAATGTTGTTAGCGTGAAGAGATTTCTCTTGCCAAGGTTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTAGTTCNCTGTACAGATAACCTGAAAAAAGTTTGGAGTTTGCTGTCAAGTTTTTGATTGTAAAGTATTTGGATACTCTGTGTGCTAACAGTTTGGAATGTAATGTGTTGCCCCAGTTCAAACAATATCAGTTTTATGCTGCAACCGAGTTCAGTTTaaaaaaaa ] consensusID : consensus_12242#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 581 fasta sequence [TTCCCCCCCCAAGCCCCCCCCTTCTTTTTTTTTGGGAGCCCTCTTTTTTTTTTTTTNACACACNACCCCCCCCCCCCCCCTCNNNNNNNNANGGGGGGGCCTNNNNNNNNCTNCTNCCCTCTATCATTNNACGCCTTNNNNNNNNNNNNNNNNGGGGGGGGGGTTTCCCGGGGGGTTTTTTTTTTCAAGGACCCAAAGGGGGGTTTTTTCCCCCCCTTTTAAAACTTTTTTTTCTTTTTGGGGGCGCAACCCCCCCAGGGGGTTGTTATTTTTTTCCCCAAAAAACTTCCCCCCTTTGTGGTTTAGGAAAAAGCCCCCCCTCCAATTTGTGTTTGCTAGTTAGCGATCAATAGGGGTGTCACCGCAGTCTTAGAACCATCCTTGCCCTGGATTTTTTTGGGTTGCTGTACTGCTTATACCTCATGACCCCGTAATTCCAGTCCCAATAAGTTAAAGGTAATGTGTTAGTTAAAGATTTCTCTTCCAAGGTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTAGTTCTCTGTACAGATAACCTGAAAAAGTTTGGAGTTTGCTGTCAAAAAAAAAAAAAAA] [-] EMBL CA761666 [TTCCCCCCCCAAGCCCCCCCCTTCTTTTTTTTTGGGAGCCCTCTTTTTTTTTTTTTNACACACNACCCCCCCCCCCCCCCTCNNNNNNNNANGGGGGGGCCTNNNNNNNNCTNCTNCCCTCTATCATTNNACGCCTTNNNNNNNNNNNNNNNNGGGGGGGGGGTTTCCCGGGGGGTTTTTTTTTTCAAGGACCCAAAGGGGGGTTTTTTCCCCCCCTTTTAAAACTTTTTTTTCTTTTTGGGGGCGCAACCCCCCCAGGGGGTTGTTATTTTTTTCCCCAAAAAACTTCCCCCCTTTGTGGTTTAGGAAAAAGCCCCCCCTCCAATTTGTGTTTGCTAGTTAGCGATCAATAGGGGTGTCACCGCAGTCTTAGAACCATCCTTGCCCTGGATTTTTTTGGGTTGCTGTACTGCTTATACCTCATGACCCCGTAATTCCAGTCCCAATAAGTTAAAGGTAATGTGTTAGTTAAAGATTTCTCTTCCAAGGTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTAGTTCTCTGTACAGATAACCTGAAAAAGTTTGGAGTTTGCTGTCAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12242#0 CTAGAAACTGTTACATTATCTAAGCTAGCCGCTGAGGAAAGAGCTGNCCATCTGGATGGT 60 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GCTCTCAAGGAATGTATGAAGCAAGTGAGGACAGTNAAGGAGGAAAGCGAGCAAAAGCTG 120 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CAAGATGTTGTCTTTGCAAAAACCAAGCAGTGGGAGATGATGAAGGCCGAACTAGAAGCA 180 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AAATTAGCTTCTTTTGAACATGAGCTTATTAGAGCAGGTGCTGAGAATGACGCACTCTCA 240 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AGATCTCTTGAAGAGCGGGAACACTTAATGATGAAGGTTGGTGGGGAAAAAGAGCAAGCA 300 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GAATCTCAGATCGAGTGTTGAAAGGCACTATTCAATCTNGTGAAAAAGAGTTAGTTCATT 360 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GAAGTTTGAACTACATGTTCTTTCCAAAGAATTTGAAATTCGCAATGAAGAAAAGAACAT 420 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GAGTGTGCGTTCAGCTGATGTAGCAACCAAGCAACATGTAGAGGATGTCAAGAAAATATC 480 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AAAACTGGAAGCGGAGTGCCAAAGGTTACGTGGTCTTGTTCGGAAAAAGTTACCCGGGCC 540 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AGCTGCATTAGCTCAAATGAAGCTGGAAGTGGATAGCTGGGGCAGAGACCATGCTGATAA 600 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CAGATTGCGACGCTCCCCTTCAAGGAGTTCTAATTTCCATCATCCTTTGTCACCATCCCC 660 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TGATAATTCTCTTGAAAACTTGCAGCACATGCAGAAAGAGAATGAATTTCTGACTGCACG 720 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CTTGTTATCGATGGAGGATGAAACAAAGATGTTAAAAGAGGCGCTGTCAAAGCGTAATAA 780 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TGAGTTGCAGGTGTCAAGAAACACATGTGCTAAGACAGCAGGCAAGCTCCGCAGCATGGA 840 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TGTTCATATGGTGAGTGCTAGGCAGTATAAGAATCCAACAAATTCAAACCTTGATGTTCA 900 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CCATGATGGTGCACTGAGCCTGAATGGAAGTAACCCACCAAGTCTGACTTCCATGTCCGA 960 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AGACGGAGTTGATGATGCAACAAGTTGTGCCGAATCTTGGGCCAATGCTTTGATATCTGA 1020 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GCTCTCACACATCAAGAAAGATAATGGAGGTAAGGGCAGTTTGACAGAAAATTCCAATCA 1080 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GATGGTACTCATGGATGACTTTCTAGAGATGGAGAGGTTGGCGTGTTTATCTCCTGAAGG 1140 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AAAAGAATGTGGAAGCTTTATTGACAAGAAGAAGGCCACTAAAGTTCACACAACTCTCAC 1200 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TACCATCACTAAACGGGAAAGTGATAGAGATTCATGGCCATCCTCGCAGTTCCCAGATAC 1260 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 ACCATCCAGCAGTGAGCATCTGCCTGAGAACTCCCCACTTTCAAAATTGCACTCAAGAAT 1320 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TTCTTCTCTCTTAGGTTCTCATTCACCACAGAACAATGTTGGCAAGGTCCTAGAGGGTAT 1380 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CAGAAATATCCTAAGAGATATCAAGGAAGAAGCAGAATCAGTGAGTGCAAAAAAAAGAAT 1440 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CAGCCTGATAACATGAATGGACTTGCTGATAATGGATCTTTGACAAAGCAATCCAAGAAC 1500 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CTGAGGGATGTGGATCATGGTCTAAGACATGCTATTTTGGAAATTCTTGATTTTTTCCAG 1560 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CCATTTAAAAGACAACTATCTGAGGTCCAAGGTAAAAGTTCCCACCAAAACACAATCCTT 1620 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GAGAAAATAGAAAAGTTCTCCACTATAGCTGACAAAGTTGTGCTAAACGAAAATGCTCTT 1680 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GCCGAAATGGTGATTGCATTAGCGGAAATTTTGGCAGGAAATTCTGCTATTAAACTCACA 1740 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TTGCCGAGAGACAGCATCACTGAAACCGAGAGCAATAATCTGGACTATGTTGATAAAGTG 1800 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 ACCTTATTGGAAAACAAAGTGCATCATGAGCCAATTAAAGATAGCCTTGCTGATATTTGT 1860 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TCACTTGCGCCTCATTCGTCTTCTGATCCTGACTTTGAGGGTTCTAGGGATGCATTTGTT 1920 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GTCAAAACCACAGTGCAGATGTGCTCAATGGAGGAATATGAACAACTGAAATCGGAGAAG 1980 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AGGAAATTGGAGATGGAATTAGCAAAGTGCAATGAAACTATCGAATGTAGAAAGCTTGAG 2040 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TTTAGTCTGATGGAGAAAAACATGGAAGAGCTTACGTCAAAGTTATCTGCATGCGAGAAA 2100 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TCGAATAGCTTGACTGAGACACAGCTGAAGTGTATGGCTGAATCATACAAATCACTTGAG 2160 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TTACACAAGTTGAAATTAGAAAGTGAAATAGAAGTTATGCATAGACAAATAAATACTTTG 2220 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AGAACTGAACTTGCTGATGAAAGACAAAACCATCAGGACGATTTGGCGAAGTACAGAGAT 2280 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 CTTAAGGAGAAGATTGAAAGGTATGAGAATGAGAAGAATACTTCATCTGTAGATGAGGAT 2340 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GCAGGTGTTAAAATAAAGCAGGACAAAGAGATCGCAGCAGCAGCAGAGAAGCTTGCAGAA 2400 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TGCCAGGAGACAATATTGCTTCTTGGCCGTCAGCTGCAGACTCTTCGCCCCCCTCCAGCA 2460 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 GAACCACTGGGTTCTGTGTTAAACCAACAACCTGTGGGGGTGTTTTCTGAAGATCAAGCT 2520 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 AGAACAACCCAAGGCTTGCATTTTAAGAAGCTGTCAGGTCAATTTGATACAGATCACACA 2580 consensus_12242#1 ------------------------------------------------------------ consensus_12242#0 TTCTCAAGTGCACCGGGAACAGGAAACGTATCTCCGCTAAATGGATATAGAACACACAAA 2640 consensus_12242#1 -----------------------TTCCCCCCCCAAGCCCCCCCCTTCTTTTTTTTTGGGA 37 * * ** * * * consensus_12242#0 AGCCCCTCCAATCTTGATGGAAACACTTACTTCGCTTCTCCAAACAACTCCAAGCGTCCA 2700 consensus_12242#1 GCCCTCTTTTTTTTTTTTTNACACACNACCCCCCCCCCCCCCCTCNNNNNNNNANGGGGG 97 ** ** * ** * * **** * * * * ** * * consensus_12242#0 AAGCACAGATCAAGGTCTTCTTCCTCTTCCTCATTTACTAACCAGTTCACAGAGAAACAG 2760 consensus_12242#1 GGCCTNNNNNNNNCTNCTNCCCTCTATCATTNNACGCCTTNNNNNNNNNNNNNNNNGGGG 157 * ** * ** * * ** * consensus_12242#0 AGCCGAGGTTTCAGTCGGTTATTTT---CGAAGAGCAAGAGCGAA---TACTAACCGACT 2814 consensus_12242#1 GGGGGGTTTCCCGGGGGGTTTTTTTTTTCAAGGACCCAAAGGGGGGTTTTTTCCCCCCCT 217 * * * * * **** **** * * ** * * ** * * * ** ** consensus_12242#0 TTTGAG-CTTGTTTTGCTTGTCGTGG---CAAGCACTGCAGGTG-----TATATTTTTGC 2865 consensus_12242#1 TTTAAAACTTTTTTTTCTTTTTGGGGGCGCAACCCCCCCAGGGGGTTGTTATTTTTTTCC 277 *** * *** **** *** * * ** *** * * **** * *** ***** * consensus_12242#0 CAACAAAACCTACCACCTATTTGTGTATTATGTAGATGATGCCTGCACTTACCAGATTCT 2925 consensus_12242#1 CCAAAAAACTTCCCCCCT--TTGTGGTTTA---GGAAAAAGCCCCCCCT--CCAATTT-- 328 * * ***** * ** *** ***** *** ** * *** * ** *** ** consensus_12242#0 AGTAGTTTTTGCTTGAGATTTTAGCTGTATCCATATTCAGTGTGGTTGTCAGCCGTCAGT 2985 consensus_12242#1 ----GTGTTTGCTAG-----TTAGCGAT---------CAATAGGGGTGTCA-CCG-CAGT 368 ** ****** * ***** * ** * ** ***** *** **** consensus_12242#0 ACTAAGAACCATCCTTTGCCCTGGATTTTTTTGGGTTGCTGTTACTGCTTATACCTCATG 3045 consensus_12242#1 -CTTAGAACCATCCTT-GCCCTGGATTTTTTTGGGTTGCTGT-ACTGCTTATACCTCATG 425 ** ************ ************************* ***************** consensus_12242#0 GAACCTCACTGTAAATTTGCCTAGCTACCTCGATGAAGATTGAGAAGGTAATGTTGTTAG 3105 consensus_12242#1 A-----CCCCGTAATTCCA-------GTCCCAAT-AAGTT---AAAGGTAATGT-GTTAG 468 * * **** * * * ** *** * ********** ***** consensus_12242#0 CGTGAAGAGATTTCTCTTGCCAAGGTTCAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTA 3165 consensus_12242#1 TT---AAAGATTTCTCTT-CCAAGGT-CAGTTAACCGCTAGCTTGTGTTGTGGTTGGTTA 523 * *********** ******* ********************************* consensus_12242#0 GTTCTCTGTACAGATAACCTGAAAAAAGTTTGGAGTTTGCTGTCAAGTTTTTGATTGTAA 3225 consensus_12242#1 GTTCTCTGTACAGATAACCTGAAAAA-GTTTGGAGTTTGCTGTCAAA-----AAAAAAAA 577 ************************** ******************* * ** consensus_12242#0 AGTATTTGGATACTCTGTGTGCTAACAGTTTGGAATGTAATGTGTTGCCCCAGTTCAAAC 3285 consensus_12242#1 AAAA-------------------------------------------------------- 581 * * consensus_12242#0 AATATCAGTTTTATGCTGCAACCGAGTTCAGTTTTGTNTATAAAAAAAAAAAAAAA 3341 consensus_12242#1 -------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||