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Oryza sativa
cluster # 12258 cluster # 12258       Sequences # 10       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12258#0 length = 3809 sequences # 7  
 consensus_12258#1 length = 665 sequences # 3  
consensusID : consensus_12258#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 3809
fasta sequence 
                              [CACCACAGCGCTCATACCCGCTGCGCACACAAATCCGCCTCCTCTTCCGCTCGAATTTACGATTCTGCCCCCCTCCGCTCCACCGCGCGAAGGCGAAGCCGGTAGCCATGAAGCTGGAGGTGATGCCGAAGCAGAGGGCCATGGAGGCCGAGCAGAGGGAGGAGGCCATGGAGATGAGCGGGCTCGAGCTGTGGAAGCACGAGAAGCCCGCGTCCATGGTGGTGTTCCTCCCGCCGCCGCCGCCGCCGCCGCCGCTTGTGCCGGCGGCGGCGGCCGCGGTCGCGGCGGCGTGTGGTGAGGAGGCGACGCT-GGTGCCACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCAAGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCAAGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGTAAACGAAACATGGAAAAAATTTGAGTTATCTTTCGTTGTCAATTCCGATTCTTACTAGAATCATATAAAACCGGTTCATGTTTTCCAATAACGTATCGTCGTACGGTTTGATCATCGCGTTGTTCACTCCTGATTGGTAGTGCTGCCACTGGCGGTGATTTTGGGGGAAGAATTCGATTCGTTTGTGAATTTATTAATCATCAACTGAATTTCCAAAAAGGGCCCCTTCGGCTACTCGCCTAGGCTCCTAGTTGTTCGTTGTAACGCTGGGGAATTTTCATTATCTAAAAAAGACCTGCTGAATTTTCAAATTTCACGGCGAATCGGCAGTGGTCCCTGTCAGCATTGTTAATCAAGCCAGCTGTGCGGTGGATTTTAAACAATTCTTTTTCCAGTATTCCGATTTTTTTTTATTTGCGTGATCCTGCAATTACAAGGCTATCAGTGAGTGTGCATCATATCATCCCTTTTGGCAGACAGCATCTTCTCTGTACAGGAGGTGCCTGTTCGTTTCTCTTCTTTGTTCTGTTTCTTGTTTGAATGATTTCTTCACTGTTCTGATAGGTAGGTAAATTGTGGAATTACTCTGACACATGAATTTTCTTGTTGTGGATTCAGGGTGAGCAGCTTAAGTTCCTGTTCATGTCCTACTTATCTGCTCACCGTCCTGTTCATACCCTATGTTCTTCAGAACTTGTTGGTTTTCGTTGGCAGCTTTAATGATCCCAACAGTATATACAATTTTAGCCAATGTTATGATTCTTTTGATTATGTTAAATATGCATTATTGCAAAAAAAAAGACAGTTTGTGAAAGTTTTACGAATTTAAAATCTTGTCAAAGTTGTTTGAGTAAACTTCTTGGTCAATGCAGAATTTTGAGTAATCCGCATTGGGCTTACTAAGCTGTCAAAGCTATCTGCAGATAGTGTCCATTTAGCTTCTTGAGGCAAGTTGCATGAAATGGAGTTGTAGTTTTCCGCTACACGGATGGCACCTAAGAATAGATATAATAGATTGCATGCCCATATCCACACATTGTGCTGTCCAATATCTTGTTTGGTTGTTTGCCGGACCTATCTTGTTTTGTTGTTGATGGGAGCACTAACGGTCTGGATCTGTCTCCGTTTTTTGAGAACTGTAATTTTGTGCTAGATACAAAAATGGGGAGATGAACTTGATAATTCTTACTGGAGAGATACTGATTTTCTTTTATGTACTATATGTTTGCCGTTAATTTATCAGTTGGATCACCTCACATGCCTGTGGTCGTCAAGCAGCAATGGGTCTAAGCACTGGGAATAACTTTAGCTTTATTTCTTGCTGTACTGTCAACACATGGCTTCCATATATTCCCCAATTTCCCACTGAAGTAGCTGTGGATCTTGTCTATGTGTCTTGGTTGCCCTGGATGTAAGATGTCATGGTATGAGTAAAATGTACATGATTTTGTACCTTAATTGGAAATATGTTTCCGCCACATGTAGAAGGCTTTGATAAAAAAAAAACAAACATGTAGAGGCCCAATAAATTATCAATATGTAAAACTTCATAATTTTGTCAACATTTTTAATGAGAAGATTTTGGAAGGCATCTTAGCTGACAAGTTTTCGTACAGCTTTACCTGTGGATGATTTTGAGTTGTTATTTTCGGAGTTTACTAATTTACAACTTGGTTATGCACTACTCATGAAATTAATATACCCAAATTAGGCAAATATGTATACAGTTACGCCTCAGATTTTCTGAGTGCCATTGTTGAGTTTGTGGTTTATTGGTTTTCTGTACTGGTCAAGATCAGTTATCTAGTAGTGTTTGATTTTTTCTTTCACCCTTCTTGCTTTAGCTTTATGCTATAAATACTCAAAAGCAAATGTCCCATTCATTC-TTTTTTTTTTCAAATTTTGACATCATCGATGACCTAACTGAAGTTGAGTAGATTGTCATTTATATGAACCGGCAACCTTGTGGTGTATGAGTCATAGTTGCTGTCCATAATCCACAGTTTGCTCTGTGTTGGCACTGTCTGACCATTTTTTGCAGAAGCCATGAGCAGGAATTCCCAATGAACTCGATAGGAATTCTTGATGCAGGGCCACTAGGA-TTTTTTTTTTACTAACAGGGCCACTAGGATGGTTGACCTAATTCCAAATCCTACTTTATTTTCGTTAGAAAAACAATGAAATCTCTTAGATTTAGCAAAGTTGCTTTTTTTCTCTCCATTAAAAAAATAGGCCCTGTTGCTGAAATTCACTCAAGGAAGGAAACTAGGGGACTCATAAAATAGTTCACTGTCAGAGTTTTATAGGAATTGACCATCTTGTATTTCTTCTGATCTGCGTTGACCTTGGTGCATTTTCTCCAGTGACATGGCCAACCTTACTGAAAATGATAACCTTGTTCCTGACACTTTGTATAAAATGTTTTAAATGTAAAATATTTAGGATTATGCAACTACGTGCACCACATATCACTTATAAATATGATTCTTGTCACAACAATTCATTATGCACTCTGTTTTTTCTTAGTCTGAAAACCTGATATCTCCACAGCTGATGACTGACAACATCTGAACTACTGTTGCTACAGGAACCATTCGTCAACATCCCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGCAAGCA-CCGCA-CCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGT-----AAAAAAAGAAAATGT-TT-GT-AATTGAGTTGAGAGTTCTAGTTTTCTCCTGCTTAGCTCCCTGCAGATCCTATGAACCAGACAGTTGTGGGTAGGATTGCAAGAGGTTTTTTCCCCATTTTTTTTTCTGGTAACTCTTGCGAGGAATTCACCAATTGTTTTCGGGTACTGAAAGCTGTACTCGAGCAGCATTGCTCGGCGGGAATGAACTTTCTCTTGATGCAAAAAAAGCTTGACTAGCTCTTCTTGCATGGATATATACATGATCATGTGCATTAACCGCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK065860             [CACCACAGCGCTCATACCCGCTGCGCACACAAATCCGCCTCCTCTTCCGCTCGAATTTACGATTCTGCCCCCCTCCGCTCCACCGCGCGAAGGCGAAGCCGGTAGCCATGAAGCTGGAGGTGATGCCGAAGCAGAGGGCCATGGAGGCCGAGCAGAGGGAGGAGGCCATGGAGATGAGCGGGCTCGAGCTGTGGAAGCACGAGAAGCCCGCGTCCATGGTGGTGTTCCTCCCGCCGCCGCCGCCGCCGCCGCCGCTTGTGCCGGCGGCGGCGGCCGCGGTCGCGGCGGCGTGTGGTGAGGAGGCGACGCT GGTGCCACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCAAGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCAAGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGTAAACGAAACATGGAAAAAATTTGAGTTATCTTTCGTTGTCAATTCCGATTCTTACTAGAATCATATAAAACCGGTTCATGTTTTCCAATAACGTATCGTCGTACGGTTTGATCATCGCGTTGTTCACTCCTGATTGGTAGTGCTGCCACTGGCGGTGATTTTGGGGGAAGAATTCGATTCGTTTGTGAATTTATTAATCATCAACTGAATTTCCAAAAAGGGCCCCTTCGGCTACTCGCCTAGGCTCCTAGTTGTTCGTTGTAACGCTGGGGAATTTTCATTATCTAAAAAAGACCTGCTGAATTTTCAAATTTCACGGCGAATCGGCAGTGGTCCCTGTCAGCATTGTTAATCAAGCCAGCTGTGCGGTGGATTTTAAACAATTCTTTTTCCAGTATTCCGATTTTTTTTTATTTGCGTGATCCTGCAATTACAAGGCTATCAGTGAGTGTGCATCATATCATCCCTTTTGGCAGACAGCATCTTCTCTGTACAGGAGGTGCCTGTTCGTTTCTCTTCTTTGTTCTGTTTCTTGTTTGAATGATTTCTTCACTGTTCTGATAGGTAGGTAAATTGTGGAATTACTCTGACACATGAATTTTCTTGTTGTGGATTCAGGGTGAGCAGCTTAAGTTCCTGTTCATGTCCTACTTATCTGCTCACCGTCCTGTTCATACCCTATGTTCTTCAGAACTTGTTGGTTTTCGTTGGCAGCTTTAATGATCCCAACAGTATATACAATTTTAGCCAATGTTATGATTCTTTTGATTATGTTAAATATGCATTATTGCAAAAAAAAAGACAGTTTGTGAAAGTTTTACGAATTTAAAATCTTGTCAAAGTTGTTTGAGTAAACTTCTTGGTCAATGCAGAATTTTGAGTAATCCGCATTGGGCTTACTAAGCTGTCAAAGCTATCTGCAGATAGTGTCCATTTAGCTTCTTGAGGCAAGTTGCATGAAATGGAGTTGTAGTTTTCCGCTACACGGATGGCACCTAAGAATAGATATAATAGATTGCATGCCCATATCCACACATTGTGCTGTCCAATATCTTGTTTGGTTGTTTGCCGGACCTATCTTGTTTTGTTGTTGATGGGAGCACTAACGGTCTGGATCTGTCTCCGTTTTTTGAGAACTGTAATTTTGTGCTAGATACAAAAATGGGGAGATGAACTTGATAATTCTTACTGGAGAGATACTGATTTTCTTTTATGTACTATATGTTTGCCGTTAATTTATCAGTTGGATCACCTCACATGCCTGTGGTCGTCAAGCAGCAATGGGTCTAAGCACTGGGAATAACTTTAGCTTTATTTCTTGCTGTACTGTCAACACATGGCTTCCATATATTCCCCAATTTCCCACTGAAGTAGCTGTGGATCTTGTCTATGTGTCTTGGTTGCCCTGGATGTAAGATGTCATGGTATGAGTAAAATGTACATGATTTTGTACCTTAATTGGAAATATGTTTCCGCCACATGTAGAAGGCTTTGATAAAAAAAAAACAAACATGTAGAGGCCCAATAAATTATCAATATGTAAAACTTCATAATTTTGTCAACATTTTTAATGAGAAGATTTTGGAAGGCATCTTAGCTGACAAGTTTTCGTACAGCTTTACCTGTGGATGATTTTGAGTTGTTATTTTCGGAGTTTACTAATTTACAACTTGGTTATGCACTACTCATGAAATTAATATACCCAAATTAGGCAAATATGTATACAGTTACGCCTCAGATTTTCTGAGTGCCATTGTTGAGTTTGTGGTTTATTGGTTTTCTGTACTGGTCAAGATCAGTTATCTAGTAGTGTTTGATTTTTTCTTTCACCCTTCTTGCTTTAGCTTTATGCTATAAATACTCAAAAGCAAATGTCCCATTCATTC TTTTTTTTTTCAAATTTTGACATCATCGATGACCTAACTGAAGTTGAGTAGATTGTCATTTATATGAACCGGCAACCTTGTGGTGTATGAGTCATAGTTGCTGTCCATAATCCACAGTTTGCTCTGTGTTGGCACTGTCTGACCATTTTTTGCAGAAGCCATGAGCAGGAATTCCCAATGAACTCGATAGGAATTCTTGATGCAGGGCCACTAGGA TTTTTTTTTTACTAACAGGGCCACTAGGATGGTTGACCTAATTCCAAATCCTACTTTATTTTCGTTAGAAAAACAATGAAATCTCTTAGATTTAGCAAAGTTGCTTTTTTTCTCTCCATTAAAAAAATAGGCCCTGTTGCTGAAATTCACTCAAGGAAGGAAACTAGGGGACTCATAAAATAGTTCACTGTCAGAGTTTTATAGGAATTGACCATCTTGTATTTCTTCTGATCTGCGTTGACCTTGGTGCATTTTCTCCAGTGACATGGCCAACCTTACTGAAAATGATAACCTTGTTCCTGACACTTTGTATAAAATGTTTTAAATGTAAAATATTTAGGATTATGCAACTACGTGCACCACATATCACTTATAAATATGATTCTTGTCACAACAATTCATTATGCACTCTGTTTTTTCTTAGTCTGAAAACCTGATATCTCCACAGCTGATGACTGACAACATCTGAACTACTGTTGCTACAGGAACCATTCGTCAACATCCCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGCAAGCA CCGCA CCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGT     AAAAAAAGAAAATGT TT GT AATTGAGTTGAGAGTTCTAGTTTTCTCCTGCTTAGCTCCCTGCAGATCCTATGAACCAGACAGTTGTGGGTAGGATTGCAAGAGGTTTTTTCCCCATTTTTTTTTCTGGTAACTCTTGCGAGGAATTCACCAATTGTTTTCGGGTACTGAAAGCTGTACTCGAGCAGCATTGCTCGGCGGGAATGAACT                                                                                          ]
[+] EMBL BI798989             [                 CCGCTGCGCACACAAATCCGCCTCCTCTTCCGCTCGAATTTACGATTCTGCCCCCCTCCGCTCCACCGCGCGAAGGCGAAGCCGGTAGCCATGAAGCTGGAGGTGATGCCGAAGCAGAGGGCCATGGAGGCCGAGCAGAGGGAGGAGGCCATGGAGATGAGCGGGCTCGAGCTGTGGAAGCACGAGAAGCCCGCGTCCATGGTGGTGTTCCTCCCGCCGCCGCCGCCGCCGCCGCCGCTTGTGCCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB966541             [                                                                                                                                                                                                                                                                                               GCGTGTGGTGAGGAGGCGACGCTNGGTGCCACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCAAGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF277410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGGTTATGCACTACTCATGAAATTAATATACCCAAATTAGGCAAATATGTATACAGTTACGCCTCAGATTTTCTGAGTGCCATTGTTGAGTTTGTGGTTTATTGGTTTTCTGTACTGGTCAAGATCAGTTATCTAGTAGTGTTTGATTTTTTCTTTCACCCTTCTTGCTTTAGCTTTATGCTATATTTTCTTAAAAGCAAATGTCCCATTCATTCTTTTTTTTTTTCAAATTTTGACATCATCGATGACCTAACTGAAGTTGAGTAGATTGTCATTTATATGAACCGGCAACCTTGTGGTGTATGAGTCATAGTTGCTGTCCATAATCCACAGTTTGCTCTGTGTTGGCACTGTCTGACCATTTTTTGCAGAAGCCATGAGCAGGAATTCCCAATGAACTCGATAGGAATTCTTGATGCAGGGCCACTAGGATTTTTTTTTTTACTAACAGGGCCACTAGGATGGTTGACCTAATTCCAAATCCTACTTTATTTTCGTTAGAAAAACAATGAAATCTCTTAGATTTAGCAAAGTTGCTTTTTTTCTCTCCATTAAAAAAATAGGCCCTGTTGCTGAAATTCACTCAAGGAAGGAAACTAGGGGACTCATAAAATAGTTCACTGTCAGAGTTTTATAGGAATTGACCATCTTGTATTTCTTCTGATCTGCGTTGACCTTGGTGCATTTTCTCCAGTGACATGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS16568A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGNAAGCA CCGCA CCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGT     AAANAAAGAAAATGT TT GTAAATTGAGTTGAGAG TCTAGTTTTtc                                                                                                                                                                                                                                                             ]
[-] EMBL CF277409             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCAAGAGAGGCAAGCACCCGCACCCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAGGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGT     AAAAAAAGAAAATGT TT GT AATTGAGTTGAGAGTTCTAGTTTTCTCCTGCTTAGCTCCCTGCAGATCCTATGAACCAGACAGTTGTGGGTAGGATTGCAAGAGGTTTTTTCCCCATTTTTTTTTCTGGTAAaaaaa                                                                                                                                                                  ]
[+] EMBL AU101883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgnttagGAATGAACCCCGTTACANACAACAAGGAAATGTCTTCGTCAATTGAGTTGAGAGTTCTAGTTTTCTCCTGCTTAGCTCCCTGCAGATCCTATGAACCAGACAGTTGTGGGTAGGATTGCAAGAGGTTTTTTCCCCATTTTTTTTTCTGGTAACTCTTGCGAGGAATTCACCAATTGTTTTCGGGTACTGAAAGCTGTACTCGAGCAGCATTGCTCGGCGGGAATGAACTTTCTCTTGATGCAAAAAAAGCTTGACTAGCTCTTCTTGCATGGATATATACATGATCATGTGCATTAACCGCAAAAAAAAAAAAAAAAAA]




>consensus_12258#0
CACCACAGCGCTCATACCCGCTGCGCACACAAATCCGCCTCCTCTTCCGCTCGAATTTAC
GATTCTGCCCCCCTCCGCTCCACCGCGCGAAGGCGAAGCCGGTAGCCATGAAGCTGGAGG
TGATGCCGAAGCAGAGGGCCATGGAGGCCGAGCAGAGGGAGGAGGCCATGGAGATGAGCG
GGCTCGAGCTGTGGAAGCACGAGAAGCCCGCGTCCATGGTGGTGTTCCTCCCGCCGCCGC
CGCCGCCGCCGCCGCTTGTGCCGGCGGCGGCGGCCGCGGTCGCGGCGGCGTGTGGTGAGG
AGGCGACGCTGGTGCCACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCG
GCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCAAGTCGCTCAACCTCCGCTCCATCGTGT
ACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCA
AGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGTAAACGAAACATGGAAAAAATTTGAGT
TATCTTTCGTTGTCAATTCCGATTCTTACTAGAATCATATAAAACCGGTTCATGTTTTCC
AATAACGTATCGTCGTACGGTTTGATCATCGCGTTGTTCACTCCTGATTGGTAGTGCTGC
CACTGGCGGTGATTTTGGGGGAAGAATTCGATTCGTTTGTGAATTTATTAATCATCAACT
GAATTTCCAAAAAGGGCCCCTTCGGCTACTCGCCTAGGCTCCTAGTTGTTCGTTGTAACG
CTGGGGAATTTTCATTATCTAAAAAAGACCTGCTGAATTTTCAAATTTCACGGCGAATCG
GCAGTGGTCCCTGTCAGCATTGTTAATCAAGCCAGCTGTGCGGTGGATTTTAAACAATTC
TTTTTCCAGTATTCCGATTTTTTTTTATTTGCGTGATCCTGCAATTACAAGGCTATCAGT
GAGTGTGCATCATATCATCCCTTTTGGCAGACAGCATCTTCTCTGTACAGGAGGTGCCTG
TTCGTTTCTCTTCTTTGTTCTGTTTCTTGTTTGAATGATTTCTTCACTGTTCTGATAGGT
AGGTAAATTGTGGAATTACTCTGACACATGAATTTTCTTGTTGTGGATTCAGGGTGAGCA
GCTTAAGTTCCTGTTCATGTCCTACTTATCTGCTCACCGTCCTGTTCATACCCTATGTTC
TTCAGAACTTGTTGGTTTTCGTTGGCAGCTTTAATGATCCCAACAGTATATACAATTTTA
GCCAATGTTATGATTCTTTTGATTATGTTAAATATGCATTATTGCAAAAAAAAAGACAGT
TTGTGAAAGTTTTACGAATTTAAAATCTTGTCAAAGTTGTTTGAGTAAACTTCTTGGTCA
ATGCAGAATTTTGAGTAATCCGCATTGGGCTTACTAAGCTGTCAAAGCTATCTGCAGATA
GTGTCCATTTAGCTTCTTGAGGCAAGTTGCATGAAATGGAGTTGTAGTTTTCCGCTACAC
GGATGGCACCTAAGAATAGATATAATAGATTGCATGCCCATATCCACACATTGTGCTGTC
CAATATCTTGTTTGGTTGTTTGCCGGACCTATCTTGTTTTGTTGTTGATGGGAGCACTAA
CGGTCTGGATCTGTCTCCGTTTTTTGAGAACTGTAATTTTGTGCTAGATACAAAAATGGG
GAGATGAACTTGATAATTCTTACTGGAGAGATACTGATTTTCTTTTATGTACTATATGTT
TGCCGTTAATTTATCAGTTGGATCACCTCACATGCCTGTGGTCGTCAAGCAGCAATGGGT
CTAAGCACTGGGAATAACTTTAGCTTTATTTCTTGCTGTACTGTCAACACATGGCTTCCA
TATATTCCCCAATTTCCCACTGAAGTAGCTGTGGATCTTGTCTATGTGTCTTGGTTGCCC
TGGATGTAAGATGTCATGGTATGAGTAAAATGTACATGATTTTGTACCTTAATTGGAAAT
ATGTTTCCGCCACATGTAGAAGGCTTTGATAAAAAAAAAACAAACATGTAGAGGCCCAAT
AAATTATCAATATGTAAAACTTCATAATTTTGTCAACATTTTTAATGAGAAGATTTTGGA
AGGCATCTTAGCTGACAAGTTTTCGTACAGCTTTACCTGTGGATGATTTTGAGTTGTTAT
TTTCGGAGTTTACTAATTTACAACTTGGTTATGCACTACTCATGAAATTAATATACCCAA
ATTAGGCAAATATGTATACAGTTACGCCTCAGATTTTCTGAGTGCCATTGTTGAGTTTGT
GGTTTATTGGTTTTCTGTACTGGTCAAGATCAGTTATCTAGTAGTGTTTGATTTTTTCTT
TCACCCTTCTTGCTTTAGCTTTATGCTATAAATACTCAAAAGCAAATGTCCCATTCATTC
TTTTTTTTTTCAAATTTTGACATCATCGATGACCTAACTGAAGTTGAGTAGATTGTCATT
TATATGAACCGGCAACCTTGTGGTGTATGAGTCATAGTTGCTGTCCATAATCCACAGTTT
GCTCTGTGTTGGCACTGTCTGACCATTTTTTGCAGAAGCCATGAGCAGGAATTCCCAATG
AACTCGATAGGAATTCTTGATGCAGGGCCACTAGGATTTTTTTTTTACTAACAGGGCCAC
TAGGATGGTTGACCTAATTCCAAATCCTACTTTATTTTCGTTAGAAAAACAATGAAATCT
CTTAGATTTAGCAAAGTTGCTTTTTTTCTCTCCATTAAAAAAATAGGCCCTGTTGCTGAA
ATTCACTCAAGGAAGGAAACTAGGGGACTCATAAAATAGTTCACTGTCAGAGTTTTATAG
GAATTGACCATCTTGTATTTCTTCTGATCTGCGTTGACCTTGGTGCATTTTCTCCAGTGA
CATGGCCAACCTTACTGAAAATGATAACCTTGTTCCTGACACTTTGTATAAAATGTTTTA
AATGTAAAATATTTAGGATTATGCAACTACGTGCACCACATATCACTTATAAATATGATT
CTTGTCACAACAATTCATTATGCACTCTGTTTTTTCTTAGTCTGAAAACCTGATATCTCC
ACAGCTGATGACTGACAACATCTGAACTACTGTTGCTACAGGAACCATTCGTCAACATCC
CTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTGC
TTATTCACTGCAAGAGAGGCAAGCACCGCACCGGCTGCGTCGTGGGGTGCTTGAGGAAGC
TTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGG
CGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGA
CAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCT
AGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGA
ATAATTTTGGAACCCGTAGAATGAACCCCGTAAAAAAAGAAAATGTTTGTAATTGAGTTG
AGAGTTCTAGTTTTCTCCTGCTTAGCTCCCTGCAGATCCTATGAACCAGACAGTTGTGGG
TAGGATTGCAAGAGGTTTTTTCCCCATTTTTTTTTCTGGTAACTCTTGCGAGGAATTCAC
CAATTGTTTTCGGGTACTGAAAGCTGTACTCGAGCAGCATTGCTCGGCGGGAATGAACTT
TCTCTTGATGCAAAAAAAGCTTGACTAGCTCTTCTTGCATGGATATATACATGATCATGT
GCATTAACCGCAAAAAAAAAAAAAAAAAA

consensusID : consensus_12258#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 665
fasta sequence 
                              [AAGGGAATAG-TGGGCCGCGGCGGCGTGTGGTGAGGAGGCGACGCTGGTG-CACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCA-AGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCAAGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGAACCATTCGTCAACATCCCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGCAAGCACCGCACCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGTAAAAAAAAC]

[+] EMBL CB964542             [AAGGGAATAG TGGGCCGCGGCGGCGTGTGGTGAGGAGGCGACGCTGGTG CACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGG CGCCAACTTCCGGTTCCTCA AGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCAAGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGAACCATTCGTCAACATCCCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGCAAGCACCGCACCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGTAAAAAAAAC]
[+] EMBL BU673597             [ AGGGAATAGCTTGG CGTGGCGGCGTGTGGTGAGGAGGCGACGCTGGTGCCACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCACAGTCGCTCAACCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB964814             [                      GGCGTGTGGTGAGGAGGCGACGCTGGTG CACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCA AGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCAAGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGAACCATTCGTCAACATCCCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGCAAGCACCGCACCGGCTGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTGAATAAGTTTGGAACCCGTAGAATGAACCCCGTAGAAACAAa]




>consensus_12258#1
AAGGGAATAGTGGGCCGCGGCGGCGTGTGGTGAGGAGGCGACGCTGGTGCACCGCTCAAC
TTCGCGATGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCGGCCGCCAACTTCCGG
TTCCTCAAGTCGCTCAACCTCCGCTCCATCGTGTACCTGTGCCCGGAGCCGTACCCGGAG
ACGAACGCGGAGTTCCTCGCCAAGAACGGGATCAAGCTCCACCAGTTCGGAATCGAGGGG
CGCAAGGAACCATTCGTCAACATCCCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTC
CTAGACGTAAAAAACCAACCTCTGCTTATTCACTGCAAGAGAGGCAAGCACCGCACCGGC
TGCGTCGTGGGGTGCTTGAGGAAGCTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAG
TACCAGCGCTTCGCCGCTGCGAAGGCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTC
GACATCTCAAGCTTGAAGCACCTGACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCG
CGCTGTCTCCTCCTCTTTAAGTCCTAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCA
GCTACTGAATTTGATTCAGCAGTGAATAATTTTGGAACCCGTAGAATGAACCCCGTAAAA
AAAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12258#0      CACCACAGCGCTCATACCCGCTGCGCACACAAATCCGCCTCCTCTTCCGCTCGAATTTAC 60
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GATTCTGCCCCCCTCCGCTCCACCGCGCGAAGGCGAAGCCGGTAGCCATGAAGCTGGAGG 120
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TGATGCCGAAGCAGAGGGCCATGGAGGCCGAGCAGAGGGAGGAGGCCATGGAGATGAGCG 180
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GGCTCGAGCTGTGGAAGCACGAGAAGCCCGCGTCCATGGTGGTGTTCCTCCCGCCGCCGC 240
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CGCCGCCGCCGCCGCTTGTGCCGGCGGCGGCGGCCGCGGTCGCGGCGGCGTGTGGTGAGG 300
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AGGCGACGCTGGTGCCACCGCTCAACTTCGCGATGGTCGACGACGGCATCTTCCGCTCCG 360
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GCTTCCCCGCGGCCGCCAACTTCCGGTTCCTCAAGTCGCTCAACCTCCGCTCCATCGTGT 420
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      ACCTGTGCCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCGCCAAGAACGGGATCA 480
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AGCTCCACCAGTTCGGAATCGAGGGGCGCAAGGTAAACGAAACATGGAAAAAATTTGAGT 540
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TATCTTTCGTTGTCAATTCCGATTCTTACTAGAATCATATAAAACCGGTTCATGTTTTCC 600
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AATAACGTATCGTCGTACGGTTTGATCATCGCGTTGTTCACTCCTGATTGGTAGTGCTGC 660
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CACTGGCGGTGATTTTGGGGGAAGAATTCGATTCGTTTGTGAATTTATTAATCATCAACT 720
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GAATTTCCAAAAAGGGCCCCTTCGGCTACTCGCCTAGGCTCCTAGTTGTTCGTTGTAACG 780
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CTGGGGAATTTTCATTATCTAAAAAAGACCTGCTGAATTTTCAAATTTCACGGCGAATCG 840
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GCAGTGGTCCCTGTCAGCATTGTTAATCAAGCCAGCTGTGCGGTGGATTTTAAACAATTC 900
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTTTTCCAGTATTCCGATTTTTTTTTATTTGCGTGATCCTGCAATTACAAGGCTATCAGT 960
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GAGTGTGCATCATATCATCCCTTTTGGCAGACAGCATCTTCTCTGTACAGGAGGTGCCTG 1020
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTCGTTTCTCTTCTTTGTTCTGTTTCTTGTTTGAATGATTTCTTCACTGTTCTGATAGGT 1080
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AGGTAAATTGTGGAATTACTCTGACACATGAATTTTCTTGTTGTGGATTCAGGGTGAGCA 1140
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GCTTAAGTTCCTGTTCATGTCCTACTTATCTGCTCACCGTCCTGTTCATACCCTATGTTC 1200
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTCAGAACTTGTTGGTTTTCGTTGGCAGCTTTAATGATCCCAACAGTATATACAATTTTA 1260
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GCCAATGTTATGATTCTTTTGATTATGTTAAATATGCATTATTGCAAAAAAAAAGACAGT 1320
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTGTGAAAGTTTTACGAATTTAAAATCTTGTCAAAGTTGTTTGAGTAAACTTCTTGGTCA 1380
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      ATGCAGAATTTTGAGTAATCCGCATTGGGCTTACTAAGCTGTCAAAGCTATCTGCAGATA 1440
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GTGTCCATTTAGCTTCTTGAGGCAAGTTGCATGAAATGGAGTTGTAGTTTTCCGCTACAC 1500
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GGATGGCACCTAAGAATAGATATAATAGATTGCATGCCCATATCCACACATTGTGCTGTC 1560
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CAATATCTTGTTTGGTTGTTTGCCGGACCTATCTTGTTTTGTTGTTGATGGGAGCACTAA 1620
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CGGTCTGGATCTGTCTCCGTTTTTTGAGAACTGTAATTTTGTGCTAGATACAAAAATGGG 1680
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GAGATGAACTTGATAATTCTTACTGGAGAGATACTGATTTTCTTTTATGTACTATATGTT 1740
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TGCCGTTAATTTATCAGTTGGATCACCTCACATGCCTGTGGTCGTCAAGCAGCAATGGGT 1800
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CTAAGCACTGGGAATAACTTTAGCTTTATTTCTTGCTGTACTGTCAACACATGGCTTCCA 1860
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TATATTCCCCAATTTCCCACTGAAGTAGCTGTGGATCTTGTCTATGTGTCTTGGTTGCCC 1920
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TGGATGTAAGATGTCATGGTATGAGTAAAATGTACATGATTTTGTACCTTAATTGGAAAT 1980
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      ATGTTTCCGCCACATGTAGAAGGCTTTGATAAAAAAAAAACAAACATGTAGAGGCCCAAT 2040
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AAATTATCAATATGTAAAACTTCATAATTTTGTCAACATTTTTAATGAGAAGATTTTGGA 2100
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AGGCATCTTAGCTGACAAGTTTTCGTACAGCTTTACCTGTGGATGATTTTGAGTTGTTAT 2160
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTTCGGAGTTTACTAATTTACAACTTGGTTATGCACTACTCATGAAATTAATATACCCAA 2220
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      ATTAGGCAAATATGTATACAGTTACGCCTCAGATTTTCTGAGTGCCATTGTTGAGTTTGT 2280
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GGTTTATTGGTTTTCTGTACTGGTCAAGATCAGTTATCTAGTAGTGTTTGATTTTTTCTT 2340
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TCACCCTTCTTGCTTTAGCTTTATGCTATAAATACTCAAAAGCAAATGTCCCATTCATTC 2400
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTTTTTTTTTCAAATTTTGACATCATCGATGACCTAACTGAAGTTGAGTAGATTGTCATT 2460
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TATATGAACCGGCAACCTTGTGGTGTATGAGTCATAGTTGCTGTCCATAATCCACAGTTT 2520
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GCTCTGTGTTGGCACTGTCTGACCATTTTTTGCAGAAGCCATGAGCAGGAATTCCCAATG 2580
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      AACTCGATAGGAATTCTTGATGCAGGGCCACTAGGATTTTTTTTTTACTAACAGGGCCAC 2640
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TAGGATGGTTGACCTAATTCCAAATCCTACTTTATTTTCGTTAGAAAAACAATGAAATCT 2700
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CTTAGATTTAGCAAAGTTGCTTTTTTTCTCTCCATTAAAAAAATAGGCCCTGTTGCTGAA 2760
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      ATTCACTCAAGGAAGGAAACTAGGGGACTCATAAAATAGTTCACTGTCAGAGTTTTATAG 2820
consensus_12258#1      --------------------------------------------------------AAGG 4
                                                                               *  *

consensus_12258#0      GAATTGACCATCTTGTATTTCTTCTGATCTGCGTTGACCTTGGTGCATTTTCTCCAGTGA 2880
consensus_12258#1      GAATAGTGGGCCGCGGCGGCGTGTGGTGAGGAGGCGACGCTGGTGCACCGCT-----CAA 59
                       **** *     *  *      *   *    * *  ***  *******            *

consensus_12258#0      CATGGCCAACCTTACTGAAAATGATAACCTT-GTTCCTGACACTTTGTATAAAATGTTTT 2939
consensus_12258#1      CTTCGCGA---TGGTCGACGACGGCATCTTCCGCTCCGGCTTCCCCGCG------GCCGC 110
                       * * ** *   *    **  * *  * * *  * *** *   *   *        *    

consensus_12258#0      AAATGTAAAATATTTAGGATTATGCAACTACGTGCACCACATATCACTTATAAATATGAT 2999
consensus_12258#1      CAACTTCCGGTTCCTCAAGTCGCTCAACC---TCCGCTCCAT----CGTGTACCTGTG-- 161
                        **  *    *   *    *    ****    * * *  ***    * * **  * **  

consensus_12258#0      TCTTGTCACAACAATTCATTATGCACTCTGTTTTTTCTTAGTCTGAAAACCTGATATCTC 3059
consensus_12258#1      -CCCGGAGCCGTACCCGGAGACGAACGCGGAGTTCCTCG---CCAAGAACGGGAT----- 212
                        *  *   *   *       * * ** * *  **        *  * ***  ***     

consensus_12258#0      CACAGCTGATGACTGACAACATCTGAACTACTGTTGCTACAGGAACCATTCGTCAACATC 3119
consensus_12258#1      CA-AGCT-----CCACCA--GTTCGGAATCGAGGGGCGCAAGGAACCATTCGTCAACATC 264
                       ** ****     *   **   *  * * *   *  **   ********************

consensus_12258#0      CCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTG 3179
consensus_12258#1      CCTGACGACAAAATTCGAGAGGCGCTCAAAGTTGTCCTAGACGTAAAAAACCAACCTCTG 324
                       ************************************************************

consensus_12258#0      CTTATTCACTGCAAGAGAGGCAAGCACCGCACCGGCTGCGTCGTGGGGTGCTTGAGGAAG 3239
consensus_12258#1      CTTATTCACTGCAAGAGAGGCAAGCACCGCACCGGCTGCGTCGTGGGGTGCTTGAGGAAG 384
                       ************************************************************

consensus_12258#0      CTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAG 3299
consensus_12258#1      CTTCAGAAATGGTGCTTGTCTTCAGTGTTCGACGAGTACCAGCGCTTCGCCGCTGCGAAG 444
                       ************************************************************

consensus_12258#0      GCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTG 3359
consensus_12258#1      GCGAGGAGCACCGATCAGAGATTCATGGAGCTGTTCGACATCTCAAGCTTGAAGCACCTG 504
                       ************************************************************

consensus_12258#0      ACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCC 3419
consensus_12258#1      ACAGCTTCACATTGTTAACCAAGAGCGTGCGATTCGCGCTGTCTCCTCCTCTTTAAGTCC 564
                       ************************************************************

consensus_12258#0      TAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTG 3479
consensus_12258#1      TAGCAAATCTCCCAAACCTATGATCTTCTCCCTGCAGCTACTGAATTTGATTCAGCAGTG 624
                       ************************************************************

consensus_12258#0      AATAATTTTGGAACCCGTAGAATGAACCCCGTAAAAAAAGAAAATGTTTGTAATTGAGTT 3539
consensus_12258#1      AATAATTTTGGAACCCGTAGAATGAACCCCGTAAAAAAAAC------------------- 665
                       ***************************************                     

consensus_12258#0      GAGAGTTCTAGTTTTCTCCTGCTTAGCTCCCTGCAGATCCTATGAACCAGACAGTTGTGG 3599
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      GTAGGATTGCAAGAGGTTTTTTCCCCATTTTTTTTTCTGGTAACTCTTGCGAGGAATTCA 3659
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      CCAATTGTTTTCGGGTACTGAAAGCTGTACTCGAGCAGCATTGCTCGGCGGGAATGAACT 3719
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TTCTCTTGATGCAAAAAAAGCTTGACTAGCTCTTCTTGCATGGATATATACATGATCATG 3779
consensus_12258#1      ------------------------------------------------------------
                                                                                   

consensus_12258#0      TGCATTAACCGCAAAAAAAAAAAAAAAAAA 3809
consensus_12258#1      ------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)