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Oryza sativa
cluster # 12285 cluster # 12285       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12285#0 length = 1505 sequences # 7  
consensus_12285#1 length = 782 sequences # 3  

consensusID : consensus_12285#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1505
fasta sequence
                              [CTCCATCCACAGTATCCACTCCGCCGCCACCACCGTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCCACCCGCCGCCGCGGCCGCCGCTGCTCATCACCATCTCCTTCACCTTCTCTTTCCCCACACTCACGCCGCCGCCTACCACGCCGTCGTCGTCCTTCTCCGGGAACGGCCGGGAACTGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTCTCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTTTTCTCAAGCCGTCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGCCCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTCGACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTCCCGTTCTCTCCCCACCCCGAGCGATCCATCCATTCCCCCTCCCCTCAAGCGATTCCCCGGTTCCCCTTCGCAATCCGCACTCAACTCCCTTCCAAGATCCGATTCCCCAACCACTGCTCAGTCGCCTAAACCCTAGCGCCGCCATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTAGATCTGGGACTGGGAGGATGAGGGGTGGGTGGGTGTGGCTGCTTCTGCGGTCATCGACGCCGCCCCCGCCTCCTCCTGCTCCTTGTTATTCTCCTCCCTAGCATCCACGATCACGCTGCCTCCAGCCCTCTACTGGTACATCCACGCTACCTCCAGCCCTCCAGCCATCTAACCCGGGTCCTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCACCTGGGATTCTAGATTTCAAGGAAGCAGAAATGGGGGCAAAGGGGATGGGCACCTGGTTGTTCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGACTTGTGGGTGGAGCCGTGGAGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTTGCGTTGGTTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACGCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTATTCATGTTTTGTGCTTTTGTATGGAAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTATGGCTGGAATGTGATTATAATATAATTATGCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK103811             [CTCCATCCACAGTATCCACTCCGCCGCCACCACCGTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCCACCCGCCGCCGCGGCCGCCGCTGCTCATCACCATCTCCTTCACCTTCTCTTTCCCCACACTCACGCCGCCGCCTACCACGCCGTCGTCGTCCTTCTCCGGGAACGGCCGGGAACTGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTCTCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTTTTCTCAAGCCGTCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGCCCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTCGACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTCCCGTTCTCTCCCCACCCCGAGCGATCCATCCATTCCCCCTCCCCTCAAGCGATTCCCCGGTTCCCCTTCGCAATCCGCACTCAACTCCCTTCCAAGATCCGATTCCCCAACCACTGCTCAGTCGCCTAAACCCTAGCGCCGCCATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTAGATCTGGGACTGGGAGGATGAGGGGTGGGTGGGTGTGGCTGCTTCTGCGGTCATCGACGCCGCCCCCGCCTCCTCCTGCTCCTTGTTATTCTCCTCCCTAGCATCCACGATCACGCTGCCTCCAGCCCTCTACTGGTACATCCACGCTACCTCCAGCCCTCCAGCCATCTAACCCGGGTCCTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCACCTGGGATTCTAGATTTCAAGGAAGCAGAAATGGGGGCAAAGGGGATGGGCACCTGGTTGTTCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGACTTGTGGGTGGAGCCGTGGAGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTTGCGTTGGTTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACGCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTATTCATGTTTTGTGCTTTTGTATGGAAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTATGGCTGGAATGTGATTATAAT                              ]
[+] EMBL CB679763             [                               ACCGCCTTCTTCCTCCTCCTCCTCCACCTCCTCCCACCCGCCGCCGCGGCCGCCGCTGCTCATCACCATCTCCTTCACCTTCTCTTTCACGACACTCACGCCGCCGCCTACCACGCCGTCGACGTGATTCTCCGGGAACGGCCGGGAACTGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTCTCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTGTTCGCAAGCCGTCTCATGGCGCCTGCCCACGGCCGGAGGTTGGGCAGCAAAGGCGGCAGCGGCAACCACGCCCTCCCCTCCGCCAAATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU068145             [                                                                                             TCACCATCTCCTTCACCTTCTCTTTCCCCACACTCACGCCGCCGCCTACCACGCCGTCGTCGTCCTTCTCCGGGAACGGCCGGGAACTGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTCTCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTTTTCTCAAGCCGTCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGCCCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTCGACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB678316             [                                                                                                                                            ACCACCCCTTCGACGTCCTTCTCCGGGAACGGCCGGGAACTGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTCTCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTTTTCTCAAGCCGTCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGCCCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTCGACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTCCCGTTCTCTCCCCACCCCGAGCGATCCATCCATTCCCCCTCCCCTCAAGCGATTCCCCGGTTCCCCTTCGCAATCCGCACTCAACTCCCTTCCAAGATCCGATTCCCCAACCACTGCTCAGTCGCCTAAACCCTAGCGCCGCCATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTAGATCTGGGACTGGGAGGATGAGGGGTGGGTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB683459             [                                                                                                                                                                                                                                                                                                     CAAGCCGTCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGCCCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTCGACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTCCCGTTCTCTCCCCACCCCGAGCGATCCATCCATTCCCCCTCCCCTCAAGCGATTCCCCGGTTCCCCTTCGCAATCCGCACTCAACTCCCTTCCAAGATCCGATTCCCCAACCACTGCTCAGTCGCCTAAACCCTAGCGCCGCCATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTAGATCTGGGACTGGGAGGATGAGGGGTGGGTGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU068486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCCCCTTCGCAATCCGCACTCAACTCCNNTNCAAGATCCGATTNNNCAACCACTGCTCAGTCGCCTAAACCTTAGCGCCGCCATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTAGATCTGGGACTGGGAGGATGAGGGGTGGGTGGGTGTGGCTGCTTCTGCGGTCATCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU068144             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACGCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTATTCATGTTTTGTGCTTTTGTATGGAAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTATGGCTGGAATGTGATTATAATATAATTATGCAAAAAAAAAAAAAAAAAAAA]


>consensus_12285#0 CTCCATCCACAGTATCCACTCCGCCGCCACCACCGTCCCCTTCCTCCTCCTCCTCCTCCT CCTCCCACCCGCCGCCGCGGCCGCCGCTGCTCATCACCATCTCCTTCACCTTCTCTTTCC CCACACTCACGCCGCCGCCTACCACGCCGTCGTCGTCCTTCTCCGGGAACGGCCGGGAAC TGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTC TCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTTTTCTCAAGCCG TCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGC CCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTC GACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTCCCGTTCTCTCCCCACCCCGAGCG ATCCATCCATTCCCCCTCCCCTCAAGCGATTCCCCGGTTCCCCTTCGCAATCCGCACTCA ACTCCCTTCCAAGATCCGATTCCCCAACCACTGCTCAGTCGCCTAAACCCTAGCGCCGCC ATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTA GATCTGGGACTGGGAGGATGAGGGGTGGGTGGGTGTGGCTGCTTCTGCGGTCATCGACGC CGCCCCCGCCTCCTCCTGCTCCTTGTTATTCTCCTCCCTAGCATCCACGATCACGCTGCC TCCAGCCCTCTACTGGTACATCCACGCTACCTCCAGCCCTCCAGCCATCTAACCCGGGTC CTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCAC CTGGGATTCTAGATTTCAAGGAAGCAGAAATGGGGGCAAAGGGGATGGGCACCTGGTTGT TCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGACTTGTGGGTGGAGCCGTGGAGGCG ACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCG GAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTTGCGTTGG TTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGA AGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACGCCGCCGA AACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAAC TTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTATTCATGTT TTGTGCTTTTGTATGGAAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGC TAGAAAATTAATTATGGCTGGAATGTGATTATAATATAATTATGCAAAAAAAAAAAAAAA AAAAA



consensusID : consensus_12285#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 782
fasta sequence
                              [CTACCTCCAGCCCTCCAGCCATTTAACCCGGGTCCTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCACCTGGGATTCTAGATTTCAAGGAAGCA-GAAATGGGGGCAAAGGGGATGGGCACCTGGTTGTTCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGATTTGTGGGTGGAGCCGTGGAGGCTGAAGCTGTCTCATCAGGAGAATCCTTGAAACTAAGTCCAGAGGAGCGGCTGCAGGACCAGAGAAAGTAACCATATATCAGCCACTCTAAAATCATGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTGCGTT-GGTTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACCCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTA-TTCATGTTTTGTGCTTTTGTATGG-AAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTATGGCTGGAATGTGATTATAATATAAAACAAAAAAGA]

[-] EMBL CB679764             [CTACCTCCAGCCCTCCAGCCATTTAACCCGGGTCCTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCACCTGGGATTCTAGATTTCAAGGAAGCA GAAATGGGGGCAAAGGGGATGGGCACCTGGTTGTTCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGATTTGTGGGTGGAGCCGTGGAGGCTGAAGCTGTCTCATCAGGAGAATCCTTGAAACTAAGTCCAGAGGAGCGGCTGCAGGACCAGAGAAAGTAACCATATATCAGCCACTCTAAAATCATGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTGCGTT GGTTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACGCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTA TTCATGTTTTGTGCTTTTGTATGG AAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAGTTAATTATGGCTGGAATGTGATTATAATATA            ]
[-] EMBL CB683845             [                                                                                                              agcaGAAGTACGAGATGGGGGCAAAGGGGATGCGCACCTGTTTGTTCTTGTTCTTTTCTGACGGGGCAGATGGGATGGAGACTTGTGGGTGGAGCCGTGGAGGCTGAAGCTGTCTCATCAGGAGAATCCTTGAAATTAAGTCCAGAGGAGCGGCTGCAGGACCAGAGAAAGTAACCATATCTCACCCACTCTAAAATCATGGCGACAAGGGTTTATTGTTTCGTGCACAAGGTTCCTGTGTGCGGGGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTGCGTT GGTTGCTGGAACGCAGGATTTTTTGGCTCTAGTTGCTGACTGCTGGCAGGATCCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGATGCACCCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTTTGTA TTCATGTTTTGTGCTTTTGTATGG AAATATGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATGAATTATGGCTGGAATGTGATTATAATATAAAACAAAAAAGA]
[+] EMBL AU166619             [                                                                                                                                                                                                                                                                                                           TCTAAAATCATGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTTTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTTTTTTTGCGTTNNNTTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAACGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGANGCACCCCCCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCCCTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGANGGTGGANGGATCCNTTTGGANTCCANGTTTTGGGCNTTTGNAAGGAAAAAATGTTGGAAACTGNATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTAAGGCTGGAATGTGATTAAAAaaaa            ]


>consensus_12285#1 CTACCTCCAGCCCTCCAGCCATTTAACCCGGGTCCTGCACATAGCTCCCCTGAGGAACGC CGCCATCATCCCTTCTGACCACATCAACCTCCACCTGGGATTCTAGATTTCAAGGAAGCA GAAATGGGGGCAAAGGGGATGGGCACCTGGTTGTTCTTGTTCTTTTCTGATGGGGCAGAT GGGATGGAGATTTGTGGGTGGAGCCGTGGAGGCTGAAGCTGTCTCATCAGGAGAATCCTT GAAACTAAGTCCAGAGGAGCGGCTGCAGGACCAGAGAAAGTAACCATATATCAGCCACTC TAAAATCATGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGTCTGCGGCGAATG CATCCGCTTCCCGGAGCATCAGTTATGCGTGGTTGGCACTTTTAGTGGCCAGAGTATTTT TTTTTGCGTTGGTTGCTGGAACGCAGGATTTTTTGGCACTAGTTGCTGACTGCTGGCAGG ATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGGAATTTTTTTGCTGGCTACTGGCAAGAT GCACCCCGCCGAAACTTAGTGGCTGCTAGGTGGAATTTTTTGGTGCAGGAACTTGGCACT ACCTGTAGGAACTTTGTAGTCAGCTGGGACTTGTGTAGTTGGATGGTGGATGGATCATTT TGTATTCATGTTTTGTGCTTTTGTATGGAAATATGTTGGAAACTGTATTTTGGAACTTGC TTTTGTATGGGCTAGAAAATTAATTATGGCTGGAATGTGATTATAATATAAAACAAAAAA GA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12285#0      CTCCATCCACAGTATCCACTCCGCCGCCACCACCGTCCCCTTCCTCCTCCTCCTCCTCCT 60
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      CCTCCCACCCGCCGCCGCGGCCGCCGCTGCTCATCACCATCTCCTTCACCTTCTCTTTCC 120
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      CCACACTCACGCCGCCGCCTACCACGCCGTCGTCGTCCTTCTCCGGGAACGGCCGGGAAC 180
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      TGCACCTCCATTCCCACCACCTCAGCCGAGCCCCTCCCCTCTCGACCTCTCGCGGCTCTC 240
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      TCCCAACGCTCTCTCTCTCTCTCTCTCTCGCTGTCTCTCTCCCTCCCTTTTCTCAAGCCG 300
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      TCTCATGGCGCCTGCCCACGGTCGGCGGCTGGCCAGCAAAGGCGGCAGCGGCAACCACGC 360
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      CCTCCCCTCCGCCAGATCCGGCGGGAGGGCAGGCGCAGTGAGAGGGCCTCCTCCGACGTC 420
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      GACCGCAAGACGGCCTCCGCGCCGCTATCTCATCTTCCCGTTCTCTCCCCACCCCGAGCG 480
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      ATCCATCCATTCCCCCTCCCCTCAAGCGATTCCCCGGTTCCCCTTCGCAATCCGCACTCA 540
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      ACTCCCTTCCAAGATCCGATTCCCCAACCACTGCTCAGTCGCCTAAACCCTAGCGCCGCC 600
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      ATGGATTCGGCTACGCTCTCGCCCACCACCACCAGCACGCAGCAGCTCGCCGCCGCGCTA 660
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      GATCTGGGACTGGGAGGATGAGGGGTGGGTGGGTGTGGCTGCTTCTGCGGTCATCGACGC 720
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      CGCCCCCGCCTCCTCCTGCTCCTTGTTATTCTCCTCCCTAGCATCCACGATCACGCTGCC 780
consensus_12285#1      ------------------------------------------------------------
                                                                                   

consensus_12285#0      TCCAGCCCTCTACTGGTACATCCACGCTACCTCCAGCCCTCCAGCCATCTAACCCGGGTC 840
consensus_12285#1      --------------------------CTACCTCCAGCCCTCCAGCCATTTAACCCGGGTC 34
                                                 ********************** ***********

consensus_12285#0      CTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCAC 900
consensus_12285#1      CTGCACATAGCTCCCCTGAGGAACGCCGCCATCATCCCTTCTGACCACATCAACCTCCAC 94
                       ************************************************************

consensus_12285#0      CTGGGATTCTAGATTTCAAGGAAGCAGAAATGGGGGCAAAGGGGATGGGCACCTGGTTGT 960
consensus_12285#1      CTGGGATTCTAGATTTCAAGGAAGCAGAAATGGGGGCAAAGGGGATGGGCACCTGGTTGT 154
                       ************************************************************

consensus_12285#0      TCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGACTTGTGGGTGGAGCCGTGGAGGC- 1019
consensus_12285#1      TCTTGTTCTTTTCTGATGGGGCAGATGGGATGGAGATTTGTGGGTGGAGCCGTGGAGGCT 214
                       ************************************ ********************** 

consensus_12285#0      ------------------------------------------------------------
consensus_12285#1      GAAGCTGTCTCATCAGGAGAATCCTTGAAACTAAGTCCAGAGGAGCGGCTGCAGGACCAG 274
                                                                                   

consensus_12285#0      --------------------------------------GACAAGGGTTTATTGCTTCGTG 1041
consensus_12285#1      AGAAAGTAACCATATATCAGCCACTCTAAAATCATGGCGACAAGGGTTTATTGCTTCGTG 334
                                                             **********************

consensus_12285#0      CACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTT 1101
consensus_12285#1      CACAAGGTTCCTGTCTGCGGCGAATGCATCCGCTTCCCGGAGCATCAGTTATGCGTGGTT 394
                       ************************************************************

consensus_12285#0      GGCACTTTTAGTGGCCAGAGTATTTTTTTTTTGCGTTGGTTGCTGGAACGCAGGATTTTT 1161
consensus_12285#1      GGCACTTTTAGTGGCCAGAGTATTTTTTTTT-GCGTTGGTTGCTGGAACGCAGGATTTTT 453
                       ******************************* ****************************

consensus_12285#0      TGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGG 1221
consensus_12285#1      TGGCACTAGTTGCTGACTGCTGGCAGGATGCAGGCCGGAAGTGCAGCGGCTGCTTGGTGG 513
                       ************************************************************

consensus_12285#0      AATTTTTTTGCTGGCTACTGGCAAGATGCACGCCGCCGAAACTTAGTGGCTGCTAGGTGG 1281
consensus_12285#1      AATTTTTTTGCTGGCTACTGGCAAGATGCACCCCGCCGAAACTTAGTGGCTGCTAGGTGG 573
                       ******************************* ****************************

consensus_12285#0      AATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTG 1341
consensus_12285#1      AATTTTTTGGTGCAGGAACTTGGCACTACCTGTAGGAACTTTGTAGTCAGCTGGGACTTG 633
                       ************************************************************

consensus_12285#0      TGTAGTTGGATGGTGGATGGATCATTTTGTATTCATGTTTTGTGCTTTTGTATGGAAATA 1401
consensus_12285#1      TGTAGTTGGATGGTGGATGGATCATTTTGTATTCATGTTTTGTGCTTTTGTATGGAAATA 693
                       ************************************************************

consensus_12285#0      TGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTATGGCTGG 1461
consensus_12285#1      TGTTGGAAACTGTATTTTGGAACTTGCTTTTGTATGGGCTAGAAAATTAATTATGGCTGG 753
                       ************************************************************

consensus_12285#0      AATGTGATTATAATATAATTATGCAAAAAAAAAAAAAAAAAAAA 1505
consensus_12285#1      AATGTGATTATAATATA---AAACAAAAAAGA------------ 782
                       *****************   *  ******* *            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)