These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12286#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1565 fasta sequence [TTCTTCCATCCATCCATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT-GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGCCGC-GGACGACGAGCGGC-GGGTACAAGT-GCGG-TGAGTGGC-TGCAG-TCCGACAGGATC-TGGTCGGGGCGGCTCCGCGTGGTGTCGTGCGGCGACCGCTGCGAGATCCGCCTCGAGGACCCGGCCTCCGGCGACCTCTTCGCCGCCTGCTTCGTCCTCCCAGGCCAGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCGAGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCG-AGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT-CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT-CCGCT-CGAATCACATGGTGATAATGACTTGCTAGCATCCA-CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCATTAATCAAAAGGTTTTGAGTTGTACTCCAAAAAAAAAAAAAAAAAAA] [+] EMBL AK065629 [TTCTTCCATCCATCCATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGCCGC GGACGACGAGCGGC GGGTACAAGT GCGG TGAGTGGC TGCAG TCCGACAGGATC TGGTCGGGGCGGCTCCGCGTGGTGTCGTGCGGCGACCGCTGCGAGATCCGCCTCGAGGACCCGGCCTCCGGCGACCTCTTCGCCGCCTGCTTCGTCCTCCCAGGCCAGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCGAGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCG AGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCT CGAATCACATGGTGATAATGACTTGCTAGCAACCA CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCATTAATCAAAAGGT ] [+] EMBL OSR23651A [ ATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTNCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTNAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACANGATNCCGNCGC GGACGACGAGCGGC ] [+] EMBL C91757 [ ATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGNCGC GGACGACGAGCGGC GGGTACAAGT GCGG TGAGTGGC TTCAN TCCGACAAGATCTTGGTCGGGGCGGTTCC CGTTGTGTCGTGCGGCGACCGTTGCGAGATCCcgct ] [+] EMBL AU055841 [ AAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCTNGCTGGTGGTGCGGGAAGTGTCGGTGTACAAGATTCCGCCGCGGGACGACGANCGGCGGGGTACAAGTNCCGGTTAATTGGCTTGNAGTTCCGACAGG ] [+] EMBL AU093532 [ CAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGCCGC GGACGACGAGCGGC GGGTACAAGT GCGG TGAGTGGC TGCAG TCCGACAGGATC TGG ] [+] EMBL AK100161 [ CTCTTCGCCGCCTGCTTCGTCCTCCCAGGCCAGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCGAGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCG AGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCT CGAATCACATGGTGATAATGACTTGCTAGCATCCA CTTGGTACTCGAAAAAATAAAGGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCA ] [+] EMBL AU093533 [ CGCCTTCGTCGGNCTCGGGTTCGGCGNAGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACNTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGC CCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAANNGGAAAAGAAAATTGTGTAACTGA ] [+] EMBL AU055842 [ CACCGGGTTCCAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCT CTGCCGC AGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGCGTCGGCGCAAACAAAAAGCACNGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCNGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCTCCGAATCACATGGTGATAATGACTTGCTAGCATCCA CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCNTTAATCAAAAGGTTTTGAGTTGTNCTCCAAAAAAAAAAAAAAAAAAA] [+] EMBL AU029765 [ GCACAGGTNCTGGTTGGGCAGCATTTTGACAATGAGTCTNCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAANCCTGTATCCCGCT CGAATCACATGGTGATAATGACTTGCTAGCATCCA CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCATTAATCAAAAGGTTTTGAGTTGTACTCCAAAAAAA ] [+] EMBL BI794868 [ TAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCT CGAATCACATGGTGATAATGACTTGCTAGCATCCACCTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACCAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACCCTGTTATGAATGCGGCAGCTTATGTCACTGATGCC AATTTTCTGTAAAACACGAGCCCTGCATTCTTGTCTTTGTGCATTAATC AAAGGTTTTGAGTTGTACTCCAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||