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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12297#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2580 fasta sequence
[GTCGCGGCCACGTACGCCATCCCGAGCTCGGGGGCTACCCCGGTCGGAGGCGGAGCGCTTGGGGGCCGGGGTTTAATCGTGCGGAGGACTCGGTAGGGCTCGCCATACCTCGCGCCGTCCGGCGGCGCAGAGCGCGGCGTCGCCGCTGGGGAGAAGGACGGACTCAACGAGACGAGCGAGCGACGGCCGACAGGCGAAGGCGTTCTCGCTTCTTGGCCTCTCGCCGTTGAATTGGAGACCCACATTGGGCTTGTTTTGTGTGTTACTAGCATCACCAAGAGTTCCCCTACTACTCCCAATTTCAAATTTTGGGGTTTTTCGAGCAAAAAAAATGGATCCAACAGATATCCAAACCAGCTTCCAAAAATTTTGAGACCCTAATCCCGTGTTTCCGTTCTCCACCAGTAGAGAATACCTCCCGCTCCCAATCCACTGCAGCCGGGCAGTTTTCGCGCGCTGCCGAGGTGCTTGGTTCCCCCATCTCCATTGATTCCCCATCTCGTGCGATTGGCGGAGCTGATGAGTGACGACAGCCACGGGCGAGCGGGAGGTGGCACGTCGACAGGCGGCGGAGGGCCGCCAGCGCAGCTGCGGCAGCCGGCAAGGGCGGCTGGGTGGGCTGCAGGCTGTGGCTGCAGTTGGGCAGCGCGGCAGTAGCAGGTGGCGGGCCAACAAGTAGCAGGGCAGGCCGGCAGCAGCAGCAGATCAACAGGATGATTCAATCTTTGCTATTTGCCTTATCCACCTTAAAGATAGCCTATTAATCGATCCATCTTTGCTAGGAGTATCTGTTTTGCAGATTATTTATATGTCTATCCTCCTTTGGCTATCCCATGTACTGCTGAAACTTCATTACTTGAGGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAA-CAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCA-CCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGCAAATGCATCCT-CCAAACTCAGGAAATCAGGG-CTTCAACCAGCCTCAGATACCA-GGGAAT-TTTACCATTCCT-ATGGATAGGGTTACAGAGCCTGATAACATCTCTGATGGAGTTCAGTTAGGACAACATGGGAAGATTGCCCATCATCACCATCACCACAGACACCACTCAAAGAACCATG-GGAGTGATGAAGAGGAGCACGATATGAATGAGGATGCTGCTGATGGCAAAGACAAGAAGGGCTCTCC-ATGGCATCGGATGAAGTGGACAGATTCAATGGTGA-AGCTTTTGATTACTGCAGTATCCTACACAGGGGAGGATCCTGGAGCTGATTTAGGCGGTGGGAGGAGGAAC-TATTCAATGATGCAAAAAAAGGGAAAATGGAAAGCAATATCAAAGGTCATGGGCGAGAGAGGTTGCCATGTGTCGCCACAGCAGTGTGAGGATAAGTTCAATGACCTTAATAAGAGATACAAAAGACTAACAGATATCCTTGGAAGGGGTACTGCTTGTAATGTTGTGGAGAATCACTCACTTCTTGATCACATGGATATTTCTGAGAAGATGAAAGAGGATGCAAGGAAGATACTGAACTCCAAACACTTGTTCTATGAAGAGATGTGTTCCTACCATAATAATAACCGTATAAGTCTGCCTGAAGATCCCGCACTTCAGCAGTCACTACAGCTTGCTCTTAGATGTAAAGAGGATAATGATTTCATGAGGCATGCAAGTGGAGATGCTGAACTAGATGATGATCAGAGTGAAGATTCAGATTATGAGGAGAATGAGGAAGAACATCGAGCAGTTGATACCAATATAAGGGGCCCCTCAATGCATAAAAGGATGTGGCATGTTGTAGAT-CATGGTGATGTAGGTTTTGTCACCTCATGCTCGAATGATGGTAGTGGGAGGTCTGAT-CCCTATG-ACGTGTTGGATATCAACAAACCCTTTCCAGATGGATGTGATTTGGCTTTGGTGCAAAAAGACTTGGCTCTGAAAGCAGCAGAGA-TTCAAAAACATCGTTTGCAGATTGAAACCAAGGCTGTGCAACTCGCAAAGCAACGTCTCAAGTGGGAGATGTTCAGGAAGAACAAGGACTTGGAATTGGAAAAGTTGGCGTTGGAGAATGAACAAATGATGCTTCAGAATAAGCGGTTTGAGCTT-GACCTAAGACACAAGGAGCTAGAACTTGAGATTAAGATAAAGGGCAATGCTAATCATCCATGATCTTTGTTCTGTTAGCACTTCATTTCGCAATATGGTTGCAGATCAATTCAATTCAGGACCGTGTTTATGCAAGATGGTAGAGGTGGCAGATTGTTTATGCAAGATGGTAGAGGTGGCAGATTATCTGTGACTACTGACAAGTGACAACAATTTCAATGCTTTATAGCTAGCTCAGTGATCCTCTCCTCTTGTTGTTTATATATCATTATATCTCCTGATTCTCTCTACTTGTAAAATTTCCATGTGATACTGGGCTCCATCTGTATTCTAAAGTTTTCATCATTTTTTTCTATCCAACTTTGTTTTACTCAAAAAAAAAA]
[+] EMBL AK101154 [GTCGCGGCCACGTACGCCATCCCGAGCTCGGGGGCTACCCCGGTCGGAGGCGGAGCGCTTGGGGGCCGGGGTTTAATCGTGCGGAGGACTCGGTAGGGCTCGCCATACCTCGCGCCGTCCGGCGGCGCAGAGCGCGGCGTCGCCGCTGGGGAGAAGGACGGACTCAACGAGACGAGCGAGCGACGGCCGACAGGCGAAGGCGTTCTCGCTTCTTGGCCTCTCGCCGTTGAATTGGAGACCCACATTGGGCTTGTTTTGTGTGTTACTAGCATCACCAAGAGTTCCCCTACTACTCCCAATTTCAAATTTTGGGGTTTTTCGAGCAAAAAAAATGGATCCAACAGATATCCAAACCAGCTTCCAAAAATTTTGAGACCCTAATCCCGTGTTTCCGTTCTCCACCAGTAGAGAATACCTCCCGCTCCCAATCCACTGCAGCCGGGCAGTTTTCGCGCGCTGCCGAGGTGCTTGGTTCCCCCATCTCCATTGATTCCCCATCTCGTGCGATTGGCGGAGCTGATGAGTGACGACAGCCACGGGCGAGCGGGAGGTGGCACGTCGACAGGCGGCGGAGGGCCGCCAGCGCAGCTGCGGCAGCCGGCAAGGGCGGCTGGGTGGGCTGCAGGCTGTGGCTGCAGTTGGGCAGCGCGGCAGTAGCAGGTGGCGGGCCAACAAGTAGCAGGGCAGGCCGGCAGCAGCAGCAGATCAACAGGATGATTCAATCTTTGCTATTTGCCTTATCCACCTTAAAGATAGCCTATTAATCGATCCATCTTTGCTAGGAGTATCTGTTTTGCAGATTATTTATATGTCTATCCTCCTTTGGCTATCCCATGTACTGCTGAAACTTCATTACTTGAGGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAA CAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCA CCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGCAAATGCATCCT CCAAACTCAGGAAATCAGGG CTTCAACCAGCCTCAGATACCA GGGAAT TTTACCATTCCT ATGGATAGGGTTACAGAGCCTGATAACATCTCTGATGGAGTTCAGTTAGGACAACATGGGAAGATTGCCCATCATCACCATCACCACAGACACCACTCAAAGAACCATG GGAGTGATGAAGAGGAGCACGATATGAATGAGGATGCTGCTGATGGCAAAGACAAGAAGGGCTCTCC ATGGCATCGGATGAAGTGGACAGATTCAATGGTGA AGCTTTTGATTACTGCAGTATCCTACACAGGGGAGGATCCTGGAGCTGATTTAGGCGGTGGGAGGAGGAAC TATTCAATGATGCAAAAGAAGGGAAAATGGAAAGCAATATCAAAGGTCATGGGCGAGAGAGGTTGCCATGTGTCGCCACAGCAGTGTGAGGATAAGTTCAATGACCTTAATAAGAGATACAAAAGACTAACAGATATCCTTGGAAGGGGTACTGCTTGTAATGTTGTGGAGAATCACTCACTTCTTGATCACATGGATATTTCTGAGAAGATGAAAGAGGATGCAAGGAAGATACTGAACTCCAAACACTTGTTCTATGAAGAGATGTGTTCCTACCATAATAATAACCGTATAAGTCTGCCTGAAGATCCCGCACTTCAGCAGTCACTACAGCTTGCTCTTAGATGTAAAGAGGATAATGATTTCATGAGGCATGCAAGTGGAGATGCTGAACTAGATGATGATCAGAGTGAAGATTCAGATTATGAGGAGAATGAGGAAGAACATCGAGCAGTTGATACCAATATAAGGGGCCCCTCAATGCATAAAAGGATGTGGCATGTTGTAGAT CATGGTGATGTAGGTTTTGTCACCTCATGCTCGAATGATGGTAGTGGGAGGTCTGAT CCCTATG ACGTGTTGGATATCAACAAACCCTTTCCAGATGGATGTGATTTGGCTTTGGTGCAAAAAGACTTGGCTCTGAAAGCAGCAGAGA TTCAAAAACATCGTTTGCAGATTGAAACCAAGGCTGTGCAACTCGCAAAGCAACGTCTCAAGTGGGAGATGTTCAGGAAGAACAAGGACTTGGAATTGGAAAAGTTGGCGTTGGAGAATGAACAAATGATGCTTCAGAATAAGCGGTTTGAGCTT GACCTAAGACACAAGGAGCTAGAACTTGAGATTAAGATAAAGGGCAATGCTAATCATCCATGATCTTTGTTCTGTTAGCACTTCATTTCGCAATATGGTTGCAGATCAATTCAATTCAGGACCGTGTTTATGCAAGATGGTAGAGGTGGCAGATTGTTTATGCAAGATGGTAGAGGTGGCAGATTATCTGTGACTACTGACAAGTGACAACAATTTCAATGCTTTATAGCTAGCTCAGTGATCCTCTCCTCTTGTTGTTTATATATCATTATATCTCCTGATTCTCTCTACTTGTAAAATTTCCATGTGATACTGGGCTCCATCTGTATTCTAAAGTTTTCATCATTTTTTTCTATCCAACTTTGTT ]
[+] EMBL BI799046 [ ATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAACCAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCGACCCACCCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGC AATGCATCCTCCCAAACTCAGGAAATCAGGGCCTTCAACCAGCCTCAGATACCACGGGAATCTTTACCATTCCTGATGGATAGGGTTACAGAGCCTGATAACATCTCTGATGGAGTTCAGCTAGGACAACATGGGAAGATTGCCCATCATCACCATCACCACAGACACCACTCAAAGAACCATGCGGAGTGATGAGGAGGAGCACGATATGAATGAGGATGCTGCTGATGGCAAAGACAAGAAGGGCTCTCCAATGGCATCGGATGAAGTGGACAGATTCAATGGTGACAGCTTTTGATTACTGCAGTATCCTACACAGGGGAGGATCCTGGAGCTGATTTA GCGGTGGGAGGAGGAACATATTCAATGATGCAAAAA ]
[+] EMBL AU058170 [ GGGGAAATGGAAGGCAGCAACCCA CCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGCAAATGCATCCT CCAAACTCAGGAAATCAGGG CTTCAACCAGCCTCAGATACCA GGGAAT TTTACCATTCCT ATGGATAGGGTTACAGAGCCTGATAACATCTCTGATGGAGTTCAGTTAGGACAACATGGGAAGATTGCCCATCATCACCATCACCACAGACACCACTCAAAGAACCATG GGAGTGATGAAGAGGAGCACGATATGAATGAGGATGCTGCTGATGGCAAAGACAAGAAGGGCTCTCC ATGGCATCGGATGAAGTGGACAGATTCAATGGTGA AGCTTTTGATTACTGCAGTATCCTACACAGGGGAGGATCCTGGAGCTGATTTAGGCGGTGGGAGGAGGAAC TATTCAATGATGCAAAAA ]
[+] EMBL AU100629 [ taAAAAGGATGTGGCATGTTGTAGATNCATGGTGATGTAGGTTTTGTCACCTCATGCCCGAATGNTGGTAGTGGGAGGTCTGATCCCCTATGNCCGTGTTGGATATCAACAAACCCTTTCCAGATGGATGTGATTTGGCTTTGGTGCAAAAAGNCTTGGCTCTGAAAGCAGCAGAGA TTCAAAAACATCGTTTGCAGATTGAAACCAAGGCTGTGCAACTCGCAAAGCAACGTCTCAAGTGGGAGATGTNCAGGAAGAACAAGGACTTGGAATTGGAAAAGTTGGCGTTGGAGAATGAACAAATGATGCTTCAGAATAAGCGGTTTGA CTTGGACCTAAGACACAAGGAGCTAGAACTTGAGATTAAGATAAAGGGCAATGCTAATCATCCANGATCTTTGTTCTGTTAGCACTTCATTTCGCAATATGGTTGCAGATCAATTCAATTCAGGACCGTGTTTATGCAAGATGGTAGAGGTGGCAGATTGTTTATGCAAGATGGTAGAGGTGGCAGATTATCTGTGACTACTGACAAGTGACAACAATTTCAATGCTTTATAGCTAGCTCAGTGATCCTCTCCTCTTGTTGTTTATATATCATTATATCTCCTGATTCTCTCTACTTGTAAAATTTCCATGTGATACTGGGCTCCATCTGTATTCTAAAGTTTTCATCATTTTTTTCTAaaaaa ]
[+] EMBL C99218 [ CAGCAGAGATTTCAAAAACATCGTTTGCAGATTGAAACCAAGGCTGTGCAACTCGCAAAGCAACGTCTCAAGTGGGAGATGTTCAGGAAGAACAAGGACTTGGAATTGGAAAAGTTGGCGTTGGAGAATGAACAAATGATGCTTCAGAATAAGCGGTTTGAGCTT GACCTAAGACACAAGGAGCTAGAACTTGAGATTAAGATAAAGGGCAATGCTAATCATCCATGATCTTTGTTCTGTTAGCACTTCATTTCGCAATATGGTTGCAGATCAATTCAATTCAGGACCGTGTTTATGCAAGATGGTAGAGGTGGCAGATTGTTTATGCAAGATGGTAGAGGTGGCAGATTATCTGTGACTACTGACAAGTGACAACAATTTCAATGCTTTATAGCTAGCTCAGTGATCCTCTCCTCTTGTTGTTTATATATCATTATATCTCCTGATTCTCTCTACTTGTAAAATTTCCATGTGATACTGGGCTCCATCTGTATTCTAAAGTTTTCATCATTTTTTTCTATCCAACTTTGTTTTACTCAAAAAAAAAA]
[-] EMBL CF197182 [ nAAAGTTGGCGTTGGAGAATGAACAAATGATGCTTCAGAATAAGCGGTTTGAGCTT NNNNNAAGANNNAAGGAGCTAGAACTTGAGATTAAGATAAAGGGCAATGCTAATCATCCATGATCTTTGTTCTGTTAGCACTTCATTTCGCAATATGGTTGCAGATCAATTCAATTCAGGACCGTGTTTATGCAAGATGGTAGAGGTGGCAGATTGTTTATGCAAGATGGTAGAGGTGGCAGATTATCTGTGACTACTGACAAGTGACAACAATTTCAATGCTTTATAGCTAGCTCAGTGATCCTCTCCTCTTGTTGTTTATATATCATTATATCTCCTGATTCTCTCTACTTGTAAAATTTCCATGCGATACTGGGCTCCATCTGTATTCTAAAGTTTTCATCATTTTTTTCTAaa ]
consensusID : consensus_12297#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 462 fasta sequence
[GATCGNTNGACNTCCGTGCTCGGCGAGGCCCAATATTTCGGCGGAGG-TGAGGCGGA-GNNGAGG-GGATTGTCTCCTCGCCGGCGTTCAGTTCAGTCGCCGGATACCNTCGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTNCATGGTATCTCCAAGCAAATGCATCCTCCAAACTCAGGAAATCAGGGCTTCAACCAGCCTCAGATACCAGGGAATTTTACCATTCCTATGGATAGGGTTACAGAGCCTGATAACATCTCTGCATGGAGTTCAGTTAGGACAACAT-GGGAAGATTGCCCATCATCACCATCACCACAGACCCACTCNAAGAACCATGGGAG]
[+] EMBL OSC466 [GATCGNTNGACNTCCGTGCTCGGCGAGGCCCAATATTTCGGCGGAGG TGAGGCGGA GNNGAGG GGATTGTCTCCTCGCCGGCGTTCAGTTCAGTCGCCGGATACCNTCGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTNCATGGTATCTCCAAGCAAATGCATCCTCCAAACTCAGGAAATCAGGGCTTCAACCAGCCTCAGATACCAGGGAATTTTACCATTCCTATGGATAGGGTTACAGAGCCTGATAACATCTCTGCATGGAGTTCAGTTAGGACAACAT GGGAAGATTGCCCATCATCACCATCACCACAGAC ]
[+] EMBL AU078230 [ GAGGCTGAGGCGGAGGCGGAGGCGGATTGTCTCCTCGCCGGCGTTCAGTTCAGTCGCCGGATACCGTCGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGCAAATGCATCCTCCAAACTCAGGAAATCAGGGCTTCAACCAGCCTCAGATACCAGGGGATTTTACCATTCCTATGGATAGGGTTACAGAGCCTGATAACATCTCTG ATGGAGTTCAGTTAGGACAACATNGGGAANATTGCCCATCATCACCATCACCACAGCACCACTCNAAGAACCATGGGAG]
consensusID : consensus_12297#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence
[TGATTCCCCATCTCGCGCGATTGGCGGCGTCGAGCCGGCGTCCAGCTGATGAGTGACGACAGGCGACAGCATGGGCGAGCGGGAGGTGGCACATCGACAGGCGGAGCAGTCGAGCAGCGGAAGTCCACCAGCCACTGGCCGTTGGGCGCACCTGCGGCAGTCGGCAAGGGCGGCTGCAGGCTGTGGCTGCAGTTGGGCAGCGCGGCGCATCAGGGCCAGAGCCGGCGCGGCAGTCGGCGGGCCAACAAGTAGCAGGGCAGGCCAGCAGCAGCAGCAGAGCAACAGGCTGATTCAATCTTTGCTATTTGTCTTATCCACCTTAAAGATAGTCTATTAATCGATCTTTGCTAGGACTATCTGTTTTGCAGATTATTTATGTCTATCCTCCTTTGGCTATCCCTGAAACTTCATTAGTTGAGGTAAATTTTAGTGATGGAATGTGACGAGGGGTTG]
[+] EMBL AK107703 [TGATTCCCCATCTCGCGCGATTGGCGGCGTCGAGCCGGCGTCCAGCTGATGAGTGACGACAGGCGACAGCATGGGCGAGCGGGAGGTGGCACATCGACAGGCGGAGCAGTCGAGCAGCGGAAGTCCACCAGCCACTGGCCGTTGGGCGCACCTGCGGCAGTCGGCAAGGGCGGCTGCAGGCTGTGGCTGCAGTTGGGCAGCGCGGCGCATCAGGGCCAGAGCCGGCGCGGCAGTCGGCGGGCCAACAAGTAGCAGGGCAGGCCAGCAGCAGCAGCAGAGCAACAGGCTGATTCAATCTTTGCTATTTGTCTTATCCACCTTAAAGATAGTCTATTAATCGATCTTTGCTAGGACTATCTGTTTTGCAGATTATTTATGTCTATCCTCCTTTGGCTATCCCTGAAACTTCATTAGTTGAGGTAAATTTTAGTGATGGAATGTGACGAGGGGTTG]
consensusID : consensus_12297#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence
[GGCGAGGCCCAATATTTCGGCGGAGGCTGAGGCGGAGGCGGAGGCGGATTGTCTCCTCGCCGGCGTTCAGTTCAGTCGCCGGATACCGTCGAGTATCTGTTTTGCAGATTATTTATATGTCTATCCTCCTTTGGCTATCCCATGTACTGCTGAAACTTCATTACTTGAGGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGCAAATGCATCCTCCAAACTCAGGAAATCAGGGTTCAACCAGCCTAAGATACCAGGGAATTTTACCATTCCTATGGATAGG]
[+] EMBL OSC107422 [GGCGAGGCCCAATATTTCGGCGGAGGCTGAGGCGGAGGCGGAGGCGGATTGTCTCCTCGCCGGCGTTCAGTTCAGTCGCCGGATACCGTCGAGTATCTGTTTTGCAGATTATTTATATGTCTATCCTCCTTTGGCTATCCCATGTACTGCTGAAACTTCATTACTTGAGGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCATCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGATCGCTTTGGGGAAATGGAAGGCAGCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTTTAGATTTGCATGGTATCTCCAAGCAAATGCATCCTCCAAACTCAGGAAATCAGGGTTCAACCAGCCTAAGATACCAGGGAATTTTACCATTCCTATGGATAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GTCGCGGCCACGTACGCCATCCCGAGCTCGGGGGCTACCCCGGTCGGAGGCGGAGCGCTT 60
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GGGGGCCGGGGTTTAATCGTGCGGAGGACTCGGTAGGGCTCGCCATACCTCGCGCCGTCC 120
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GGCGGCGCAGAGCGCGGCGTCGCCGCTGGGGAGAAGGACGGACTCAACGAGACGAGCGAG 180
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CGACGGCCGACAGGCGAAGGCGTTCTCGCTTCTTGGCCTCTCGCCGTTGAATTGGAGACC 240
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CACATTGGGCTTGTTTTGTGTGTTACTAGCATCACCAAGAGTTCCCCTACTACTCCCAAT 300
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TTCAAATTTTGGGGTTTTTCGAGCAAAAAAAATGGATCCAACAGATATCCAAACCAGCTT 360
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CCAAAAATTTTGAGACCCTAATCCCGTGTTTCCGTTCTCCACCAGTAGAGAATACCTCCC 420
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GCTCCCAATCCACTGCAGCCGGGCAGTTTTCGCGCGCTGCCGAGGTGCTTGGTTCCCCCA 480
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TCTCCATTGATTCCCCATCTCGTGCGATTGGCGGAGCTGATGAGTGACGACAGCCACGGG 540
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CGAGCGGGAGGTGGCACGTCGACAGGCGGCGGAGGGCCGCCAGCGCAGCTGCGGCAGCCG 600
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 -----------------------------------------------------------G 1
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GCAAGGGCGGCTGGGTGGGCTGCAGGCTGTGGCTGCAGTTGGGCAGCGCGGCAGTAGCAG 660
consensus_12297#2 -----------------------------------------------------------T 1
consensus_12297#1 ATCGNTNGACNTCC-GTGCTCGGCGAGGCCCAATATTTCGGCGGAGG-TGAGGCGGAGNN 59
consensus_12297#3 ---------------------GGCGAGGCCCAATATTTCGGCGGAGGCTGAGGCGGAGGC 39
consensus_12297#0 GTGGCGGGCCAACAAGTAGCAGGGCAGGCCGGCAGCAGCAGCAGATCAACAGGATGATTC 720
consensus_12297#2 GATTCCCCATCTCGCGCGATTGGCGGCGTCGAGC----CGGCGTCCAGCTGATGAGTGAC 57
** * * * ** *
consensus_12297#1 GAGGG--GATTGTCTCCTCGC-CGGCGTTCAGTTCAGTCGCCGGATA---CCNTC----- 108
consensus_12297#3 GGAGGCGGATTGTCTCCTCGC-CGGCGTTCAGTTCAGTCGCCGGATA---CCGTC----- 90
consensus_12297#0 AATCTTTGCTATTTGCCTTAT-CCACCTTAAAGATAGCCTATTAATCGATCCATCTTTGC 779
consensus_12297#2 GACAGGCGACAGCATGGGCGAGCGGGAGGTGGCACA-TCGACAGGCGGAGCAGTC----- 111
* * * * * **
consensus_12297#1 ---G-------------------------------------------------------- 109
consensus_12297#3 ---GAGTATCTGTTTTGCAGATTATTTATATGTCTATCCTCCTTTGGCTATCCCATGTAC 147
consensus_12297#0 TAGGAGTATCTGTTTTGCAGATTATTTATATGTCTATCCTCCTTTGGCTATCCCATGTAC 839
consensus_12297#2 ---GAGCAGCGG------------------------------------------------ 120
*
consensus_12297#1 -----------------------TTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCA 146
consensus_12297#3 TGCTGAAACTTCATTACTTGAGGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCA 207
consensus_12297#0 TGCTGAAACTTCATTACTTGAGGTTATATTCATGTGCATCCTCGTGCACTCCTGTGTCCA 899
consensus_12297#2 -------------------AAGTCCACCAGCCACTG-GCCGTTGGGCGCACCTGCGGCAG 160
* * ** * * * ** * **** * *
consensus_12297#1 TCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGAT----CGCTTTGGGGAAATG 202
consensus_12297#3 TCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGAT----CGCTTTGGGGAAATG 263
consensus_12297#0 TCTTATATGGTACCAACAAGAAGTTGAAGTGTTTGGGTGAT----CGCTTTGGGGAAATG 955
consensus_12297#2 TCGGCAAGGGCGGCTGCAGGCTGTGGCTGCAGTTGGGCAGCGCGGCGCATCAGGGCCAGA 220
** * ** * ** * ** * * ***** *** * *** *
consensus_12297#1 GAAGGCA--GCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTT-TAGAT 259
consensus_12297#3 GAAGGCA--GCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTT-TAGAT 320
consensus_12297#0 GAAGGCA--GCAACCCACCTGGTAATATGACACAGGGACCTTCCTATGGGAGTT-TAGAT 1012
consensus_12297#2 GCCGGCGCGGCAGTCGGCGGGCCAACAAGTAGCAGGG-CAGGCCAGCAGCAGCAGCAGAG 279
* *** *** * * * ** * * ***** * ** * ** ***
consensus_12297#1 TTNCATGGTATCTCCAAGCAA---ATGCATCCTCCAAACTCAGGAAATCAGGGCTTCAAC 316
consensus_12297#3 TTGCATGGTATCTCCAAGCAA---ATGCATCCTCCAAACTCAGGAAATCAGGG-TTCAAC 376
consensus_12297#0 TTGCATGGTATCTCCAAGCAA---ATGCATCCTCCAAACTCAGGAAATCAGGGCTTCAAC 1069
consensus_12297#2 CAACAGGCTGATTCAATCTTTGCTATTTGTCTTATCCACCTTAAAGAT-AGTCTATTAAT 338
** * * ** * ** ** * ** * ** ** * **
consensus_12297#1 CAGCCTCAGATACCAGGGAATTTTACCATTCCTATGGATAGGGTTACAGAGCCTGATAAC 376
consensus_12297#3 CAGCCTAAGATACCAGGGAATTTTACCATTCCTATGGATAGG------------------ 418
consensus_12297#0 CAGCCTCAGATACCAGGGAATTTTACCATTCCTATGGATAGGGTTACAGAGCCTGATAAC 1129
consensus_12297#2 CGATCTT---TGCTAGGACTATCTGTTTTGCAGATTATTTATGTCTATCCTCCTTTGGCT 395
* ** * * *** * * * * ** *
consensus_12297#1 ATCTCTGCATGGAGTTCAGTTAGGACAACATGGGAAGATTGCCCATCATCACCATCACCA 436
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 ATCTCTG-ATGGAGTTCAGTTAGGACAACATGGGAAGATTGCCCATCATCACCATCACCA 1188
consensus_12297#2 ATCCCTGAAACTTCATTAGTTGAGGTAAATTTTAGTGATGGAATGTGACGAGGGGTTG-- 453
consensus_12297#1 CAGAC-CCACTCNAAGAACCATGGGAG--------------------------------- 462
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CAGACACCACTCAAAGAACCATGGGAGTGATGAAGAGGAGCACGATATGAATGAGGATGC 1248
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TGCTGATGGCAAAGACAAGAAGGGCTCTCCATGGCATCGGATGAAGTGGACAGATTCAAT 1308
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GGTGAAGCTTTTGATTACTGCAGTATCCTACACAGGGGAGGATCCTGGAGCTGATTTAGG 1368
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CGGTGGGAGGAGGAACTATTCAATGATGCAAAAAAAGGGAAAATGGAAAGCAATATCAAA 1428
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GGTCATGGGCGAGAGAGGTTGCCATGTGTCGCCACAGCAGTGTGAGGATAAGTTCAATGA 1488
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CCTTAATAAGAGATACAAAAGACTAACAGATATCCTTGGAAGGGGTACTGCTTGTAATGT 1548
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TGTGGAGAATCACTCACTTCTTGATCACATGGATATTTCTGAGAAGATGAAAGAGGATGC 1608
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 AAGGAAGATACTGAACTCCAAACACTTGTTCTATGAAGAGATGTGTTCCTACCATAATAA 1668
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TAACCGTATAAGTCTGCCTGAAGATCCCGCACTTCAGCAGTCACTACAGCTTGCTCTTAG 1728
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 ATGTAAAGAGGATAATGATTTCATGAGGCATGCAAGTGGAGATGCTGAACTAGATGATGA 1788
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TCAGAGTGAAGATTCAGATTATGAGGAGAATGAGGAAGAACATCGAGCAGTTGATACCAA 1848
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TATAAGGGGCCCCTCAATGCATAAAAGGATGTGGCATGTTGTAGATCATGGTGATGTAGG 1908
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TTTTGTCACCTCATGCTCGAATGATGGTAGTGGGAGGTCTGATCCCTATGACGTGTTGGA 1968
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TATCAACAAACCCTTTCCAGATGGATGTGATTTGGCTTTGGTGCAAAAAGACTTGGCTCT 2028
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GAAAGCAGCAGAGATTCAAAAACATCGTTTGCAGATTGAAACCAAGGCTGTGCAACTCGC 2088
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 AAAGCAACGTCTCAAGTGGGAGATGTTCAGGAAGAACAAGGACTTGGAATTGGAAAAGTT 2148
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GGCGTTGGAGAATGAACAAATGATGCTTCAGAATAAGCGGTTTGAGCTTGACCTAAGACA 2208
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CAAGGAGCTAGAACTTGAGATTAAGATAAAGGGCAATGCTAATCATCCATGATCTTTGTT 2268
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 CTGTTAGCACTTCATTTCGCAATATGGTTGCAGATCAATTCAATTCAGGACCGTGTTTAT 2328
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GCAAGATGGTAGAGGTGGCAGATTGTTTATGCAAGATGGTAGAGGTGGCAGATTATCTGT 2388
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 GACTACTGACAAGTGACAACAATTTCAATGCTTTATAGCTAGCTCAGTGATCCTCTCCTC 2448
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 TTGTTGTTTATATATCATTATATCTCCTGATTCTCTCTACTTGTAAAATTTCCATGTGAT 2508
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------------------------------------------------------
consensus_12297#3 ------------------------------------------------------------
consensus_12297#0 ACTGGGCTCCATCTGTATTCTAAAGTTTTCATCATTTTTTTCTATCCAACTTTGTTTTAC 2568
consensus_12297#2 ------------------------------------------------------------
consensus_12297#1 ------------
consensus_12297#3 ------------
consensus_12297#0 TCAAAAAAAAAA 2580
consensus_12297#2 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||