cluster # 12316

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Oryza sativa
cluster # 12316 cluster # 12316 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12316#0 length = 999 sequences # 10
consensusID : consensus_12316#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 999
fasta sequence
                              [TCGCTGAACCCCCAAAATCTCACAACCCACCTCCCCTCCGCCTCTCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTGCTCAAGGCGAAC-TACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGACCCGCTCGACCCGGCCGGCTGCGTGCTCGACC-TCGCCGCCATCCACGCCCGGGAGGAGGCCGCTCTCAGACAAGCTGAGATTGAAGCCGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCTCAAAGCATATTTGATGCATTGTCCAAGACGCTTCCAGTTCAGTGGGACAAGACTGACATTGTTGTAATGAAGGAGGTTC-GTGTATGCAATCCATACCTGCCTGAAAATGTCAGTGGAGGAACATCTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTGAAAGGAAAAGGCTACATGTGCGTGTACCTGGCCAATTCTAACTTATTCGGCTGCTTTTCACCTGAACTCCCCCTTTGTACTCTACTTTAAGGGCTGAATCATCCATAGATTTTTCTAAAATTTGTTTCTGCAAAATCC-TGCCATAAACTATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATGTGCCCTTCGAATAAATTGTCATGCTGATGTTAATTCAGCTGCTGGTTGTAAGAGGGCTTTGATTGAGGCAAACTTAGAAAGTAAAATTTGATTGATGGCATTGAAAGAAGGTGAGTTATAGATAACCAAGGAAAGATGGGGAGCTACCATGGAAAATGCTTCATTGAACTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA756376             [TCGCTGAACCCCCAAAATCTCACAACCCACCTCCCCTCCGCCTCTCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTGCTCAAGGCGAAC TACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGACCCGCTCGACCCGGCCGGCTGCGTGCTCGACC TCGCCGCCATCCACGCCCGGGAGGAGGCCGCTCTCAGACAAGCTGAGATTGAAGCCGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCTCANAGCATATTTGATGCATTGTCCAAGACGCTTCCAGTTCAGTGGGACAAGACTGACATTGTTGTAATGAAGGAGGTTC GTGTATGCAATCCATACCTGCCTGGAAATGTCAGTGGAGGAACATCTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTTGAAGGGAAAGGCTACATGTGCGTGTACC                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK068461             [             AAAATCTCACAACCCACCTCCCCTCCGCCTCTCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTGCTCAAGGCGAAC TACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGACCCGCTCGACCCGGCCGGCTGCGTGCTCGACC TCGCCGCCATCCACGCCCGGGAGGAGGCCGCTCTCAGACAAGCTGAGATTGAAGCCGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCTCAAAGCATATTTGATGCATTGTCCAAGACGCTTCCAGTTCAGTGGGACAAGACTGACATTGTTGTAATGAAGGAGGTTC GTGTATGCAATCCATACCTGCCTGAAAATGTCAGTGGAGGAACATCTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTGAAAGGAAAAGGCTACATGTGCGTGTACCTGGCCAATTCTAACTTATTCGGCTGCTTTTCACCTGAACTCCCCCTTTGTACTCTACTTTAAGGGC                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF335429             [                    CACAACCCACCTCCCCTCCGCCTCTCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTGCTCAAGGCGAAC TACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGACCCGCTCGACCCGGCCGGCTGCGTGCTCGACC TCGCCGCCATCCACGCCCGGGAGGAGGCCGCTCTCAGACAAGCTGAGATTGAAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSR22441A            [                       AACCCACCTCCCCTCCGCCTCTCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTGCTCAAGGCGAACTTACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGACCCGCTCGACCCGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSR23071A            [                       AACCCACCTCCCCTCCGNCTCTCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTNNAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTNAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTNCTCAAGGCGAAC TACATCCGGGAGTTCTNCGTTGTAGGCAAGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU083381             [                                       gggctnCCCATCTACCCACCGGCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATCTCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCGACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAACGTGCGGGTGCTCAAGGCGAAC TACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGACCCGCTCGACCCGGCCGGCTGCGTGCTCGACCTTCGCCGCCATCCACGCCCGGGAGGAGGCCGCTCTCAGACAAGCTGAGATTGAAGCCGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCTCAAAGCATATTTGATGCATTGTCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI795500             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         gtTCCAAGACGCTTCCAGTTCAGTGGCACAAGACTGACATTGTTGTAATGAAGGAGGTTCTGTGTATGC ATCCATACCTGCCTGAAAATGTCAGTGGAGGAACATCTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTGAAAGGAAAAGGCTACATGTGCGTGTACCTGGCC ATTCTAACTTATTCGGCTGCTTTTCACCTGAACTCCCCCTTTGTACTCTACTTTAAGGGCTGAATCAT CATAGATTTTTCTAAAATTTGTTTCTGCAAAATCCATGCCATAAACTATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATGTGTCCTTCGAATAAATTGTCATGCTGATGTTAATTCAGCTGCTGGTTGTAAGAGGGCTTTGATTGAGGC AACTTAGAAAGTAAAATTTGATTGATGGCATTGAAAGAAGGTGAGTTATAGATAACCAAGGAAAGATGGGGAGCTACCATGGAAAATGCTTCATTGAACTTAAAAAAAAAA         ]
[+] EMBL AU083382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGAGGTTC GTGTATGCAATCCATACCTGCCTG AAATGTCANTGGAGGAACATCTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTGAAAGG AAAGGCTACATGTGCGTGTACCTGGCCAATTCTAACTTATTCGGCTGCTTTTCACCTGAACTCCCCCTTTGTACTCTACTTTAAGGGCTGAATCATCCATGGATTTTTCTAAAATTTGTTTCTGCAAAATCC TGCCATAAACTATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATGTGCCCTTCGAATAAATTGTCATGCTGATGTTAATTCAGCTGCTGGTTGTAAGAGGGCTTTGATTGAGGCAAACTTAGAAAGTAAAATTTGATTGATGGCATTGAAAGAAGGTGAGTTATAGATAACAAAGGAAAGATGGGGAGCTACAATGGAAAATGCTTCATTGAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU184433             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCCTGAAAATGTCAGTGGAGGAACATNTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTGAAAGGAAAAGGCTACATGTGCGTGTACCTGGCCNATTNTAACTTATTCGGCTGCTTTTCACCTGAACTCCCCCTTTGTACTNTACTTTAAGGGNTGAATCATCAATAGATTTTTTTAAAATTTGTTTNTGCAAAATCCATGCCATNAACTATNTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATGTGCCCTTNGAATAAATTGTCATGCTGATGTTAATTCAGCTGCTGGTTGTAAGAGGGCTTTGATTGAGGCNAACTTAGAAAGTAAAATTTGATTGATGGCNTTGAAAAAAaaaaa                                                                            ]
[+] EMBL AU173337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATCCATGCCATNAACTATNTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATGTGCCCTTCGAATAAATTGTCATGCTGATGTTAATTCAGCTGCTGGTTGTAAGAGGGCTTTGATTGAGGCAAACTTAGAAAGTAAAATTTGATTGATGGCCTTGAAAAAAaaaaa                                                                            ]




>consensus_12316#0
TCGCTGAACCCCCAAAATCTCACAACCCACCTCCCCTCCGCCTCTCCCATCTACCCACCG
GCGGGCGGCGGCGGCGACATGGAGGGTGGCGGCGAGGAGTTCGCGATCGGGGTGCTGATC
TCCGTGAAGACCACCCTCGGCGAGGAGTTCGAAGGCCAGATCGTCTCCTTCGACCGCCCG
ACCAACCTCCTCGTCATTCAGGAAGGCGTGGGGAGGGCAGAGAGAGGTGAGCGGAGGAAC
GTGCGGGTGCTCAAGGCGAACTACATCCGGGAGTTCTCCGTTGTAGGCAAGGCCGACGAC
CCGCTCGACCCGGCCGGCTGCGTGCTCGACCTCGCCGCCATCCACGCCCGGGAGGAGGCC
GCTCTCAGACAAGCTGAGATTGAAGCCGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCT
CAAAGCATATTTGATGCATTGTCCAAGACGCTTCCAGTTCAGTGGGACAAGACTGACATT
GTTGTAATGAAGGAGGTTCGTGTATGCAATCCATACCTGCCTGAAAATGTCAGTGGAGGA
ACATCTGCTGCAAATGAACGGGTTAAGAAAGTGCTTGACTTTGAAAGGAAAAGGCTACAT
GTGCGTGTACCTGGCCAATTCTAACTTATTCGGCTGCTTTTCACCTGAACTCCCCCTTTG
TACTCTACTTTAAGGGCTGAATCATCCATAGATTTTTCTAAAATTTGTTTCTGCAAAATC
CTGCCATAAACTATCTCATCAGCTAGCTAAATCTGTATCCTGTTATAGATATCTCATCAG
CTAGCTAAATCTGTATCCTGTTATAGATGTGCCCTTCGAATAAATTGTCATGCTGATGTT
AATTCAGCTGCTGGTTGTAAGAGGGCTTTGATTGAGGCAAACTTAGAAAGTAAAATTTGA
TTGATGGCATTGAAAGAAGGTGAGTTATAGATAACCAAGGAAAGATGGGGAGCTACCATG
GAAAATGCTTCATTGAACTTAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case