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Oryza sativa
cluster # 12335 cluster # 12335       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12335#0 length = 1355 sequences # 8  
consensus_12335#1 length = 772 sequences # 2  

consensusID : consensus_12335#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1355
fasta sequence
                              [CCCAGCCTTCCTCTCGCCGCCGCCGACGCCGACGACGAGGAGAGGAGGAGGTGGCCATGGCGAGGCGGAGGGTCGCGGCGCTCGCGTCCCAGCTCCTGCGGAGGCAGCTGCTCATGCGGAGACCCCCGCCGCGGTTCCTCTCATCCGCGGCGGCGGCGGCTTCTGGCCCCCTCGACCGCCTCAGGTCGCCGCCCTTCGCGCGCACGGCGGCGCGGCACGGGAGCCCTGCTCTTTCCCCATGGAGCCGCTTCGGAGGGCAGAAGAGGGGCATGTTCATCCAGACGCAGTCGACCCCGAACCCGCAGTCGCTCATGTTCTATCCTGGAAAGCCGGTTATGGAGGTTGGGAGCTCTGATTTCCCGAATGCTCGGACCGCGATGACATCTCCTTTGGCCAAGGCGCTGTTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCA----CTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGAACCTGATGTATGCAATAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCACTAGGG-CTTAAATAAAGTGATACAGTGAGTTGATCACTGCTTTTGTCTAATCCTTGTATATGCCGAGCCTTTCTTATCTAAGCAGAGCTGATCAGTGATTACTACAGCATAATGAGTGTAATTCATGGTGGTGGTTTGCTTATATCTTCCTACTTCATATAATCGTATATGATGCTTTCTTTGCATCTGCACCTGCAAGAGTGATATGCTAATAAAGTTGGAATTTGATAGTCTAAAAAAAA]

[+] EMBL AK069217             [CCCAGCCTTCCTCTCGCCGCCGCCGACGCCGACGACGAGGAGAGGAGGAGGTGGCCATGGCGAGGCGGAGGGTCGCGGCGCTCGCGTCCCAGCTCCTGCGGAGGCAGCTGCTCATGCGGAGACCCCCGCCGCGGTTCCTCTCATCCGCGGCGGCGGCGGCTTCTGGCCCCCTCGACCGCCTCAGGTCGCCGCCCTTCGCGCGCACGGCGGCGCGGCACGGGAGCCCTGCTCTTTCCCCATGGAGCCGCTTCGGAGGGCAGAAGAGGGGCATGTTCATCCAGACGCAGTCGACCCCGAACCCGCAGTCGCTCATGTTCTATCCTGGAAAGCCGGTTATGGAGGTTGGGAGCTCTGATTTCCCGAATGCTCGGACCGCGATGACATCTCCTTTGGCCAAGGCGCTGTTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGAACCTGATGTATGCAACAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGG CTTAAATAAAGTGATACAGTGAGTTGATCACTGCTTTTATCTAATCCTTGTATATGCCGAGCCTTTCTTATCTAAGCAGAGCTGATCAGTGA                                                                                                                                                ]
[+] EMBL CB654427             [           TCTCGCCGCCGCCGACGCCGACGACGAGGAGAGGAGGAGGTGGCCATGGCGAGGCGGAGGGTCGCGGCGCTCGCGTCCCAGCTCCTGCGGAGGCAGCTGCTCATGCGGAGACCCCCGCCGCGGTTCCTCTCATCCGCGGCGGCGGCGGCTTCTGGCCCCCTCGACCGCCTCAGGTCGCCGCCCTTCGCGCGCACGGCGGCGCGGCACGGGAGCCCTGCTCTTTCCCCATGGAGCCGCTTCGGAGGGCAGAAGAGGGGCATGTTCATCCAGACGCAGTCGACCCCGAACCCGCAGTCGCTCATGTTCTATCCTGGAAAGCCGGTTATGGAGGTTGGGAGCTCTGATTTCCCGAATGCTCGGACCGCGATGACATCTCCTTTGGCCAAGGCGCTGTTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAG AAACATGCTCATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF326629             [                                                                                                                                                                                                                                                    CCGCTTCGGAGGGCAGAAGAGGGGCATGTTCATCCAGACGCAGTCGACCCCGAACCCGCAGTCGCTCATGTTCTATCCTGGAAAGCCGGTTATGGAGGTTGGGAGCTCTGATTTCCCGAATGCTCGGACCGCGATGACATCTCCTTTGGCCAAGGCGCTGTTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB096836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTGTAACTGTTACAAAATCAGAGGAAACCTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGCGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCAATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCA    CTTTGTTTTGAGATCAGGACTAGTTCAAAGNTTTCACCACGAATAGAGAGCTGTAATTTTGAACCTGGTGTATGCAATAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGNTAACTAGCCTACACAAATATCAGNTGCACTAGGGCCTTAAATAAAGNGATACAGNGAGNTGATCACTGCTTTTGGCTAATCCTTGGATATGCCGGGCCTTTCTTATCTAAGCAGAGCTGATCAGNGNTTAC                                                                                                                                            ]
[-] EMBL CB654428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGAACCTGATGTATGCAACAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGG CTTAAATAAAGTGATACAGTGAGTTGATCACTGCTTTTATCTAATCCTTGTATATGCCGAGCCTTTCTTATCTAAGCAGAGCTGATCAGTGATTACTACAGCATAATGAGTGTAATTCATGGTGGTGGTTTGCTTATATCTTCCTACTTCATATAATCGTATATGATGCTTTCTTTGCATCTGCACCTGCAAGAGTGATATGCTAATAAAGTTGGAATTTGATAGT          ]
[+] EMBL CB096346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCATTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCA    CTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGAACCTGATGTATGCAATAGCGAAGAAGCATACTTTCGTAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCACTAGGG CTTAAATAAAGTGATACAGTGAGTTGATCACTGCTTTTGTCTAATCCTTGTATATGCCGAGCCTTTCTTATCTAAGCAGAGCTGATCAGTGATTACTACAGCATAATGAGTGTAATTCATGGTGGTGGTTTGCTTATATCTTCCTACTTCATATAATCGTATATGATGCTTTCTTTGCATCTGCACCTGCAAGAGTGATATGCTAATAAAGNTGGAATTTGATAGTCTAAAAAAAA]
[+] EMBL BE530931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCA    CTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTG ACCTGA                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BE607479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCA    CTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGAACCTGATGTATGCAATAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCACTAGGG CTTAAATAAAGTGATACAGTGAGTTGATCACTGCTTTTG                                                                                                                                                                                                     ]


>consensus_12335#0 CCCAGCCTTCCTCTCGCCGCCGCCGACGCCGACGACGAGGAGAGGAGGAGGTGGCCATGG CGAGGCGGAGGGTCGCGGCGCTCGCGTCCCAGCTCCTGCGGAGGCAGCTGCTCATGCGGA GACCCCCGCCGCGGTTCCTCTCATCCGCGGCGGCGGCGGCTTCTGGCCCCCTCGACCGCC TCAGGTCGCCGCCCTTCGCGCGCACGGCGGCGCGGCACGGGAGCCCTGCTCTTTCCCCAT GGAGCCGCTTCGGAGGGCAGAAGAGGGGCATGTTCATCCAGACGCAGTCGACCCCGAACC CGCAGTCGCTCATGTTCTATCCTGGAAAGCCGGTTATGGAGGTTGGGAGCTCTGATTTCC CGAATGCTCGGACCGCGATGACATCTCCTTTGGCCAAGGCGCTGTTTGCAATCGACGGAG TTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTT GGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAAT CACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATT CAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAG ATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAA AAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAG AAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTG ACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAAC ATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAAC CATAGTCACTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCT GTAATTTTGAACCTGATGTATGCAATAGCGAAGAAGCATACTTTCATAGATTGTAGAGGC AGCGTTAACTAGCCTACACAAATATCAGTTGCACTAGGGCTTAAATAAAGTGATACAGTG AGTTGATCACTGCTTTTGTCTAATCCTTGTATATGCCGAGCCTTTCTTATCTAAGCAGAG CTGATCAGTGATTACTACAGCATAATGAGTGTAATTCATGGTGGTGGTTTGCTTATATCT TCCTACTTCATATAATCGTATATGATGCTTTCTTTGCATCTGCACCTGCAAGAGTGATAT GCTAATAAAGTTGGAATTTGATAGTCTAAAAAAAA



consensusID : consensus_12335#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 772
fasta sequence
                              [TTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGACCCTGATGTATGCAACAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGGCTTAAATAAAGTGATCCAGTGAGTTGATCACTGCTTTTTTCTACCAAAAAAAA]

[-] EMBL CB658651             [TTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAGAGCTGTAATTTTGACCCTGATGTATGCAACAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGGCTTAAATAAAGTGATCCAGTGAGTTGATCACTGCTTTTTTCTACCAAAAAAAA]
[-] EMBL CB658650             [                                           TTGTAACTGTTACAAAATCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAACCATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCCCCACGAATAGAGAGCTGTAATTTTGAACCTGATGTATGCAACAGCGAAGAAGCATACTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGGCTTAAATAAAGTGATACAGTGAAAGGGTCACTGCTT                 ]


>consensus_12335#1 TTTGCAATCGACGGAGTTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAA TCAGAGGAAACTTCTTGGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTT TACTCATCTGGGCAATCACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCA ATTCATGAGGATGATTCAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATT CGACCAGCTGTTCAAGATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACA GGGATAGTTAAGCTAAAAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACA TTGAAGTCTGGGATAGAAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAG CAAGAACTTGATGGTGACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTT ACGGCCAAATCTCAACATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAA TCAATCCTTCAAAAACCATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTT TTCACCACGAATAGAGAGCTGTAATTTTGACCCTGATGTATGCAACAGCGAAGAAGCATA CTTTCATAGATTGTAGAGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGGC TTAAATAAAGTGATCCAGTGAGTTGATCACTGCTTTTTTCTACCAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12335#0      CCCAGCCTTCCTCTCGCCGCCGCCGACGCCGACGACGAGGAGAGGAGGAGGTGGCCATGG 60
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      CGAGGCGGAGGGTCGCGGCGCTCGCGTCCCAGCTCCTGCGGAGGCAGCTGCTCATGCGGA 120
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      GACCCCCGCCGCGGTTCCTCTCATCCGCGGCGGCGGCGGCTTCTGGCCCCCTCGACCGCC 180
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      TCAGGTCGCCGCCCTTCGCGCGCACGGCGGCGCGGCACGGGAGCCCTGCTCTTTCCCCAT 240
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      GGAGCCGCTTCGGAGGGCAGAAGAGGGGCATGTTCATCCAGACGCAGTCGACCCCGAACC 300
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      CGCAGTCGCTCATGTTCTATCCTGGAAAGCCGGTTATGGAGGTTGGGAGCTCTGATTTCC 360
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      CGAATGCTCGGACCGCGATGACATCTCCTTTGGCCAAGGCGCTGTTTGCAATCGACGGAG 420
consensus_12335#1      --------------------------------------------TTTGCAATCGACGGAG 16
                                                                   ****************

consensus_12335#0      TTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTT 480
consensus_12335#1      TTACCAGAGTATTCTTTGGATCCGATTTTGTAACTGTTACAAAATCAGAGGAAACTTCTT 76
                       ************************************************************

consensus_12335#0      GGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAAT 540
consensus_12335#1      GGGACTATCTTAAGCCTGAGGTTTTTGCTGTGATAATGGACTTTTACTCATCTGGGCAAT 136
                       ************************************************************

consensus_12335#0      CACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATT 600
consensus_12335#1      CACTCTTTCTGGACTCAAGTACTGCAGCTTCTATGGACACCGCAATTCATGAGGATGATT 196
                       ************************************************************

consensus_12335#0      CAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAG 660
consensus_12335#1      CAGAAATAGTTGCAATGATAAAAGAGTTGCTGGAGACTCGCATTCGACCAGCTGTTCAAG 256
                       ************************************************************

consensus_12335#0      ATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAA 720
consensus_12335#1      ATGATGGTGGTGACATTGAATATCGAGGATTTGATCCAGAAACAGGGATAGTTAAGCTAA 316
                       ************************************************************

consensus_12335#0      AAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAG 780
consensus_12335#1      AAATGCAAGGTGCCTGCAGTGGATGTCCAAGTTCGTCAGTCACATTGAAGTCTGGGATAG 376
                       ************************************************************

consensus_12335#0      AAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTG 840
consensus_12335#1      AAAACATGCTCATGCATTATGTCCCTGAGGTGAAAGGAGTAGAGCAAGAACTTGATGGTG 436
                       ************************************************************

consensus_12335#0      ACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAAC 900
consensus_12335#1      ACGAGGAAGCTGAACTGACTGGCCAGTTGGAATGACTTTTCTTTACGGCCAAATCTCAAC 496
                       ************************************************************

consensus_12335#0      ATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAAC 960
consensus_12335#1      ATCTTCACATGTCGAGGGAAACTTTGCATCGTTGTTTGTGAAAATCAATCCTTCAAAAAC 556
                       ************************************************************

consensus_12335#0      CATAGTCACTTT----GTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAG 1016
consensus_12335#1      CATAGTCACTTTCTTTGTTTTGAGATCAGGACTAGTTCAAAGTTTTCACCACGAATAGAG 616
                       ************    ********************************************

consensus_12335#0      AGCTGTAATTTTGAACCTGATGTATGCAATAGCGAAGAAGCATACTTTCATAGATTGTAG 1076
consensus_12335#1      AGCTGTAATTTTGACCCTGATGTATGCAACAGCGAAGAAGCATACTTTCATAGATTGTAG 676
                       ************** ************** ******************************

consensus_12335#0      AGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCACTAGGGCTTAAATAAAGTGATAC 1136
consensus_12335#1      AGGCAGCGTTAACTAGCCTACACAAATATCAGTTGCAATAGGGCTTAAATAAAGTGATCC 736
                       ************************************* ******************** *

consensus_12335#0      AGTGAGTTGATCACTGCTTTTGTCTAATCCTTGTATATGCCGAGCCTTTCTTATCTAAGC 1196
consensus_12335#1      AGTGAGTTGATCACTGCTTTTTTCTA--CCAAAAAAAA---------------------- 772
                       ********************* ****  **    * *                       

consensus_12335#0      AGAGCTGATCAGTGATTACTACAGCATAATGAGTGTAATTCATGGTGGTGGTTTGCTTAT 1256
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      ATCTTCCTACTTCATATAATCGTATATGATGCTTTCTTTGCATCTGCACCTGCAAGAGTG 1316
consensus_12335#1      ------------------------------------------------------------
                                                                                   

consensus_12335#0      ATATGCTAATAAAGTTGGAATTTGATAGTCTAAAAAAAA 1355
consensus_12335#1      ---------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)