These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3519 fasta sequence [TCTCCTCCTCCCCTCACCACGAGAGCGAGCGCGGCGAGCTCCCCACCCACCACCACCACCGACGGCGACTACCTCCGCCGCTGCCGCGATGTCTCGCCTCTTCCGCGAGTCCCGCCGCGACTCCTCCTCCTCCAACGGCTCCTCCGCCGCCGCCGCCGCCACGGCCTCCACCGGCGGCCTCCCCTCCCCGTTCCCCGACCTCGGCGTCCCCCTCTCCGCCGCCGACCTCCGCGAGGCCGCCTACGAGGTGCTCGTCGCCTCGTCCCGCACCACGGGAGGGAAGCCGCTCACCTACATCCCCCAGGCGGCGGCATCGGCGGGTGGTGGTGGTGGGCCGGCGTCCCCGGCCTCCGCCTCGTCTCTCTCCTCCGCGAACGCCTCCTCCTCCCCGTCGCTCCAGCGCTCGCTCACCTCCGCCGCGGCGAGCAAGATGAAGAAGGCGCTCGGGCTGAGGTCGTCGGCGTCGTCCAAGGGTGGGAGCCCCGGGAGCGGCGGCGGCGGGAAGTCGGTGCCGCCGCGGCGGCCGGCGACCGTCGGGGAGCTGATGCGCGTGCAGATGCGGGTCTCGGAGCCCGCCGACGCCAGGATCCGGAGGGGCCTCCTCCGCATCGCCGCGAGTCAGCTTGGCAGGCGTGCTGAATCTATGGTCTTGCCCTTAGAATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCAGAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAACAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCTTGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTTGAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGTTGTTGATGAGATTGATGAGGTGATGGAGCTCTTAAAGAAGACCTGGGGTATTCTGGGAATTAACCAGATGCTTCACAACCTTTGCTTTGCTTGGGCATTGTTCAACCATTTTGTTATGTCCGGGCAAGTAGATATTGAGTTGCTCTCTGCTGCGGAGAATCAGTTGGCCGAAGTTGCAAAGGATGCCAAAACCACAAAAGATCCAAATTACAGCAAAGTGTTGAGTTCAACTTTAAGCTCAATAATGGGTTGGACAGAGAAAAGACTTCTGGCTTACCATGAGACCTTCAATACAAGTAACATTGAGTCCATGCAAGGTATTGTGTCAATTGGAGTGTCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGTCGGAGGAGGAAAGAAGAGACTGACGTAGCTCGCAGCAGGATAGAGACCTACATAAGGTCTTCACTCCGTACAGCTTTTGCTCAAAGAATGGAAGAAGCAGATTCCAAGCGGTCATCAAGAAACCCTACCCCTGTTCTGTCTATCCTTGCAAAGGACATTGGTGAC-CTAGCAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCC-AGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATT-GCAGTTGAAGATTCTGT-GGATAGTGATGA-TGGAGGCAAGTC-ATTAAT-CAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCTGGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTTGAAACAAGAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGAGATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCATCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTCTAAAGCAAAATCTGGCTGTGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGACACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAAGATAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGACATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGACAACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATATTGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGAGACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATT-GATGAAAGCCACTTTTGATGGGTTCTTGCTGGTGCTTCTTGCTGGTGGGCCTTTGCGTGCTTTCACTCGTCAAGACTCCCAGATAATAGAGGATGACTTCAAGGCCCTTAAAGACCTGTTTTTAGCAGATGGTGATGGTTTGCCAGAGGAATTGGTCGATAAGGCATCCTCCCAGGTCAAGAATGTCCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAACGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTACATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATCTGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCACATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCCTTTTTTTTTTGGGGGGGGGGGATTACTTACAGGTCGATTTGTTTATTATTATGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATCATTATGCAAGGCATCTGGTTCCTG] [+] EMBL AK070620 [TCTCCTCCTCCCCTCACCACGAGAGCGAGCGCGGCGAGCTCCCCACCCACCACCACCACCGACGGCGACTACCTCCGCCGCTGCCGCGATGTCTCGCCTCTTCCGCGAGTCCCGCCGCGACTCCTCCTCCTCCAACGGCTCCTCCGCCGCCGCCGCCGCCACGGCCTCCACCGGCGGCCTCCCCTCCCCGTTCCCCGACCTCGGCGTCCCCCTCTCCGCCGCCGACCTCCGCGAGGCCGCCTACGAGGTGCTCGTCGCCTCGTCCCGCACCACGGGAGGGAAGCCGCTCACCTACATCCCCCAGGCGGCGGCATCGGCGGGTGGTGGTGGTGGGCCGGCGTCCCCGGCCTCCGCCTCGTCTCTCTCCTCCGCGAACGCCTCCTCCTCCCCGTCGCTCCAGCGCTCGCTCACCTCCGCCGCGGCGAGCAAGATGAAGAAGGCGCTCGGGCTGAGGTCGTCGGCGTCGTCCAAGGGTGGGAGCCCCGGGAGCGGCGGCGGCGGGAAGTCGGTGCCGCCGCGGCGGCCGGCGACCGTCGGGGAGCTGATGCGCGTGCAGATGCGGGTCTCGGAGCCCGCCGACGCCAGGATCCGGAGGGGCCTCCTCCGCATCGCCGCGAGTCAGCTTGGCAGGCGTGCTGAATCTATGGTCTTGCCCTTAGAATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCAGAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAACAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCTTGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTTGAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGTTGTTGATGAGATTGATGAGGTGATGGAGCTCTTAAAGAAGACCTGGGGTATTCTGGGAATTAACCAGATGCTTCACAACCTTTGCTTTGCTTGGGCATTGTTCAACCATTTTGTTATGTCCGGGCAAGTAGATATTGAGTTGCTCTCTGCTGCGGAGAATCAGTTGGCCGAAGTTGCAAAGGATGCCAAAACCACAAAAGATCCAAATTACAGCAAAGTGTTGAGTTCAACTTTAAGCTCAATAATGGGTTGGACAGAGAAAAGACTTCTGGCTTACCATGAGACCTTCAATACAAGTAACATTGAGTCCATGCAAGGTATTGTGTCAATTGGAGTGTCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGTCGGAGGAGGAAAGAAGAGACTGACGTAGCTCGCAGCAGGATAGAGACCTACATAAGGTCTTCACTCCGTACAGCTTTTGCTCAAAGAATGGAAGAAGCAGATTCCAAGCGGTCATCAAGAAACCCTACCCCTGTTCTGTCTATCCTTGCAAAGGACATTGGTGAC CTAGCAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCC AGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATT GCAGTTGAAGATTCTGT GGATAGTGATGA TGGAGGCAAGTC ATTAAT CAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCTGGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTTGAAACAAGAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGAGATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCATCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTCTAAAGCAAAATCTGGCTGTGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGACACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAAGATAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGACATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGACAACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATATTGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGAGACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATT GATGAAAGCCACTTTTGATGGGTTCTTGCTGGTGCTTCTTGCTGGTGGGCCTTTGCGTGCTTTCACTCGTCAAGACTCCCAGATAATAGAGGATGACTTCAAGGCCCTTAAAGACCTGTTTTTAGCAGATGGTGATGGTTTGCCAGAGGAATTGGTCGATAAGGCATCCTCCCAGGTCAAGAATGTCCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAACGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTACATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATCTGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCACATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCCTTTTTTTTTTGGGGGGGGGGGATTACTTACAGGTCGATTTGTTTATTATTATGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATCATTATGCAAGGCATCTGGTTCCTG] [+] EMBL CB631290 [ GCGGGTGGCGGTGGTGGGCCGGCGTCCCCGGCCTCCGCCTCGTCTCTCTCCTCCGCGAACGCCTCCTCCTCCCCGTCGCTCCAGCGCTCGCTCACCTCCGCCGCGGCGAGCAAGATGAAGAAGGCGCTCGGGCTGAGGTCGTCGGCGTCGTCCAAGGGTGGGAGCCCCGGGAGCGGCGGCGGCGGGAAGTCGGTGCCGCCGCGGCGGCCGGCGACCGTCGGGGAGCTGATGCGCGTGCAGATGCGGGTCTCGGAGCCCGCCGACGCCAGGATCCGGAGGGGCCTCCTCCGCATCGCCGCGAGTCAGCTTGGCAGGCGTGCTGAATCTATGGTCTTGCCCTTAGAATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCAGAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAACAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCTTGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTTGAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGTTGTTGATGAGATTGATGAGGTGATGGAACTCTTAAAGAAGACCT ] [+] EMBL AK102844 [ GCGTGCTGAATCTATGGTCTTGCCCTTAGAATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCAGAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAACAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCTTGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTTGAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGTTGTTGATGAGATTGATGAGGTGATGGAGCTCTTAAAGAAGACCTGGGGTATTCTGGGAATTAACCAGATGCTTCACAACCTTTGCTTTGCTTGGGCATTGTTCAACCATTTTGTTATGTCCGGGCAAGTAGATATTGAGTTGCTCTCTGCTGCGGAGAATCAGTTGGCCGAAGTTGCAAAGGATGCCAAAACCACAAAAGATCCAAATTACAGCAAAGTGTTGAGTTCAACTTTAAGCTCAATAATGGGTTGGACAGAGAAAAGACTTCTGGCTTACCATGAGACCTTCAATACAAGTAACATTGAGTCCATGCAAGGTATTGTGTCAATTGGAGTGTCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGTCGGAGGAGGAAAGAAGAGACTGACGTAGCTCGCAGCAGGATAGAGACCTACATAAGGTCTTCACTCCGTACAGCTTTTGCTCAAAGAATGGAAGAAGCAGATTCCAAGCGGTCATCAAGAAACCCTACCCCTGTTCTGTCTATCCTTGCAAAGGACATTGGTGAC CTAGCAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCC AGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATT GCAGTTGAAGATTCTGT GGATAGTGATGA TGGAGGCAAGTC ATTAAT CAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCTGGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTTGAAACAAGAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGAGATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCATCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTCTAAAGCAAAATCTGGCTGTGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGACACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAAGAGAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGACATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGACAACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATATTGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGAGACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATT GATGAAAGCCACTTTTGATGGGTTCTTGCTGGTGCTTCTTGCTGGTGGGCCTTTGCGTGCTTTCACCCGTCAAGACTCCCAGATAATAGAGGATGACTTCAAGGCCCTTAAAGACCTGTTTTTAGCAGATGGTGATGGTTTGCCAGAGGAATTGGTCGATAAGGCATCCTCCCAGGTCAAGAATGTCCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAACGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTACATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATCTGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCACATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCCTTTTTTTTTTGGGGGGGGGGGATTACTTACAGGTCGATTTGTTTATTATTATGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATCATTATGCAAGGCATC ] [+] EMBL CB676165 [ TTGGTCCCTCTA AAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCC AGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATT GCAGTTGAAGATTCTGT GGATAGTGATGA TGGAGGCAAGTC ATTAAT CAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCTGGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTTGAAACAAGAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGAGATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCATCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTCTAAAGCAAAATCTGGCTGTGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGACACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAAGTGAACTCGA ] [+] EMBL OSS14843A [ GGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCCAAGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATTNGCAGTTGAGGATTCTGTGGGATAGTGATGATTGGAGGCAAGTCAATTAATCCAGAGAGNTGC ] [+] EMBL C74926 [ AGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAAGATAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGACATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGACAACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATATTGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGAGACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATTGGATGAAAGCCACTTTTG ] [-] EMBL CB631291 [ CGATAAAGCATCCTCCCAGGTCAAGAATGTCCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGCTGAGTTTAATCGATTTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAATGAACCCAACACAGTCCTGCGAGTTTTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATTTTCCCAAGAAGATTTGATGAACTCGATGTACATTTTTTGGAAACAAAATCATGAAACCCCCTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCCCTGCGGAGTTTGCCTTATTTGAGGGGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTTTATCATATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTT CTTTTTTTTTTTGGGGGGGGGGATTACTTACAGGTCGATTTGTTTATTATTATGATTATATGTTTTACCCTAATCCAGTTTTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATTTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATCATTAGGCAAGG ] [-] EMBL CB676166 [ ATGATGGCTGAGTTTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCGGAAGGAACCCAACACAGTCCTGGGAGTTTTGTGCTCCCGTTATGATGAGACGGCTACCAAGTTCTTAAAGAAAACCTATATTTTTCCCAAGAAGATTTGATGAACTCGATGTACATTTTTTGGAAACAAAATCATGAAACCCCCTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTGGAGGAACACTACCATTGTAAAGCTACCCCTGGGGAGTTTGCCTTATTTGAGGGGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTTTATCACATGCTGTTCAGTGGCGCCAAGAAATATGCGGGTACTCTTTTCTTTTTCTTTTTTCCTTTTTTTTTGGGGGGGGGGGGATTACTTACAGGTGGATTTGTTTATTATTAGGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGCCCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGGGTATATCATT ] consensusID : consensus_12336#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence [GGACGAGACAAGGGGGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAATGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTACATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATCTGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCATATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCTTTTTTTTGGGGGGGGGGATTACTTACAGGTCGATTTGNTTATTATTATGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATCATTATGCAAAAAAAAAATAA] [+] EMBL CA766924 [GGACGAGACAAGGGGGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAATGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTACATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATCTGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCATATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCTTTTTTTTGGGGGGGGGGATTACTTACAGGTCGATTTGNTTATTATTATGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATC ] [-] EMBL CA762143 [ GACGAGACAAGGGGGATTCAAACGCCTGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAATGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTACATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGTCACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATCTGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCATATGCTGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCTTTTTTTTGGGGGGGGGGATTACTTACAGGTCGATTTGTTTATTATTATGATTATATGTTTTACCCTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTAGTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTTGGACTTGAGTATATCATTATGCAAAAAAAAAATAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12336#0 TCTCCTCCTCCCCTCACCACGAGAGCGAGCGCGGCGAGCTCCCCACCCACCACCACCACC 60 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GACGGCGACTACCTCCGCCGCTGCCGCGATGTCTCGCCTCTTCCGCGAGTCCCGCCGCGA 120 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CTCCTCCTCCTCCAACGGCTCCTCCGCCGCCGCCGCCGCCACGGCCTCCACCGGCGGCCT 180 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CCCCTCCCCGTTCCCCGACCTCGGCGTCCCCCTCTCCGCCGCCGACCTCCGCGAGGCCGC 240 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CTACGAGGTGCTCGTCGCCTCGTCCCGCACCACGGGAGGGAAGCCGCTCACCTACATCCC 300 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CCAGGCGGCGGCATCGGCGGGTGGTGGTGGTGGGCCGGCGTCCCCGGCCTCCGCCTCGTC 360 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TCTCTCCTCCGCGAACGCCTCCTCCTCCCCGTCGCTCCAGCGCTCGCTCACCTCCGCCGC 420 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GGCGAGCAAGATGAAGAAGGCGCTCGGGCTGAGGTCGTCGGCGTCGTCCAAGGGTGGGAG 480 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CCCCGGGAGCGGCGGCGGCGGGAAGTCGGTGCCGCCGCGGCGGCCGGCGACCGTCGGGGA 540 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GCTGATGCGCGTGCAGATGCGGGTCTCGGAGCCCGCCGACGCCAGGATCCGGAGGGGCCT 600 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CCTCCGCATCGCCGCGAGTCAGCTTGGCAGGCGTGCTGAATCTATGGTCTTGCCCTTAGA 660 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 ATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCA 720 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAA 780 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACC 840 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 ACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCT 900 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTT 960 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGT 1020 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TGTTGATGAGATTGATGAGGTGATGGAGCTCTTAAAGAAGACCTGGGGTATTCTGGGAAT 1080 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TAACCAGATGCTTCACAACCTTTGCTTTGCTTGGGCATTGTTCAACCATTTTGTTATGTC 1140 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CGGGCAAGTAGATATTGAGTTGCTCTCTGCTGCGGAGAATCAGTTGGCCGAAGTTGCAAA 1200 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GGATGCCAAAACCACAAAAGATCCAAATTACAGCAAAGTGTTGAGTTCAACTTTAAGCTC 1260 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AATAATGGGTTGGACAGAGAAAAGACTTCTGGCTTACCATGAGACCTTCAATACAAGTAA 1320 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CATTGAGTCCATGCAAGGTATTGTGTCAATTGGAGTGTCAGCTGCAAGGGTTCTTGTTGA 1380 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AGATATATCCCATGAATACCGTCGGAGGAGGAAAGAAGAGACTGACGTAGCTCGCAGCAG 1440 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GATAGAGACCTACATAAGGTCTTCACTCCGTACAGCTTTTGCTCAAAGAATGGAAGAAGC 1500 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AGATTCCAAGCGGTCATCAAGAAACCCTACCCCTGTTCTGTCTATCCTTGCAAAGGACAT 1560 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TGGTGACCTAGCAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCC 1620 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACA 1680 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GTTCATAGCTGGACTTACAGAGCTGACCCCAGATACGGTTCAAGTGCTTAAGGCTGCTGA 1740 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TAAATTAGAGAAGGATCTTGTTAATATTGCAGTTGAAGATTCTGTGGATAGTGATGATGG 1800 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AGGCAAGTCATTAATCAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCT 1860 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTT 1920 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GAAACAAGAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGA 1980 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCA 2040 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTC 2100 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TAAAGCAAAATCTGGCTGTGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGAC 2160 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 ACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACA 2220 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACT 2280 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAA 2340 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GATAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGA 2400 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGAC 2460 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATAT 2520 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGA 2580 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 GACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATTGATGAA 2640 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AGCCACTTTTGATGGGTTCTTGCTGGTGCTTCTTGCTGGTGGGCCTTTGCGTGCTTTCAC 2700 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 TCGTCAAGACTCCCAGATAATAGAGGATGACTTCAAGGCCCTTAAAGACCTGTTTTTAGC 2760 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 AGATGGTGATGGTTTGCCAGAGGAATTGGTCGATAAGGCATCCTCCCAGGTCAAGAATGT 2820 consensus_12336#1 ------------------------------------------------------------ consensus_12336#0 CCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGC 2880 consensus_12336#1 -------------------------GGACGAGACAAGGGG-GATTCAAACGCATGATGGC 34 * * * * ******************* consensus_12336#0 TGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTG 2940 consensus_12336#1 TGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTG 94 ************************************************************ consensus_12336#0 GAGCCCGAACGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGC 3000 consensus_12336#1 GAGCCCGAATGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGC 154 ********* ************************************************** consensus_12336#0 TACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTAC 3060 consensus_12336#1 TACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGATGAACTCGATGTAC 214 ************************************************************ consensus_12336#0 ATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGT 3120 consensus_12336#1 ATTTTCTGGAAACAAAATCATGAAACCCACTGAGGAAGTCAGGATTTGGAATGATTTTGT 274 ************************************************************ consensus_12336#0 CACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATC 3180 consensus_12336#1 CACATCCTCCTTTGAGGAACACTACCATTGTAAAGCTACCACTGCGGAGTTTGCCTTATC 334 ************************************************************ consensus_12336#0 TGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCACATGC 3240 consensus_12336#1 TGAGGCGATTGATTTGAACGGGGGAGTTCAATTCAGCAACTTGGCCCTTCTATCATATGC 394 ******************************************************* **** consensus_12336#0 TGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCCTTTTTTTT 3300 consensus_12336#1 TGTTCAGTGGCGCCAAGAAATATGCTGGTACTCTTTTCTTTTTCTTTTTTCTTTTTTTT- 453 *************************************************** ******* consensus_12336#0 TTGGGGGGGGGGGATTACTTACAGGTCGATTTGTTTATTATTATGATTATATGTTTTACC 3360 consensus_12336#1 ---GGGGGGGGGGATTACTTACAGGTCGATTTGNTTATTATTATGATTATATGTTTTACC 510 ****************************** ************************** consensus_12336#0 CTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTA 3420 consensus_12336#1 CTAATCCAGTTCTTTTGCTGACCTTTGCCGCTGCATGTGTGTATTTTTCCAGTAGCTGTA 570 ************************************************************ consensus_12336#0 GTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTT 3480 consensus_12336#1 GTTTGCAACAGATATACCCATCTTGTGAATAAGTTTTGTACTGGTGTGACTTGCTGCGTT 630 ************************************************************ consensus_12336#0 GGACTTGAGTATATCATTATGCAAGGCATCTGGTTCCTG 3519 consensus_12336#1 GGACTTGAGTATATCATTATGCAAAAAAAAAATAA---- 665 ************************ * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||