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Oryza sativa
cluster # 12342 cluster # 12342       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12342#0 length = 1062 sequences # 6  
consensus_12342#1 length = 1002 sequences # 3  
consensus_12342#2 length = 725 sequences # 1  

consensusID : consensus_12342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1062
fasta sequence
                              [TCCCCTTCACCTCTACGCGTAAAACCACAACCAAAAGCAAAGCACACGAGAGAGAGACCCACCCACCCCAACCATCCCGGAGGCGGAGAGCTTGACGCCGCCGCCGACGAGCCGCAGCGGCGGAGCAAGCGGGAGCGGGAGGTGGGGATGGGGTCGAGCGACGGGGACAAGCCGCTGCGGCGGATCGCGGCGTCGTTCGAGGAGCTCGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGACCTGCTGTGCTGTTCTGGATGCTGTTTTTTTAACAGGTGAATGAGAAATTAAGAATTCGTTGTTAGCACATAATGCAGTTTGAAACAACTGAAATTCTATTTGCATAAAAAAAA]

[+] EMBL AK060949             [TCCCCTTCACCTCTACGCGTAAAACCACAACCAAAAGCAAAGCACACGAGAGAGAGACCCACCCACCCCAACCATCCCGGAGGCGGAGAGCTTGACGCCGCCGCCGACGAGCCGCAGCGGCGGAGCAAGCGGGAGCGGGAGGTGGGGATGGGGTCGAGCGACGGGGACAAGCCGCTGCGGCGGATCGCGGCGTCGTTCGAGGAGCTCGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGACCTGCTGTGCTGTTCTGGATGCTGTTTTTTTAACAGGTGAATGAGAAATTAAGAATTCGTT                                                     ]
[+] EMBL D43506               [                                                            ACCCACCCCAACCATCCNGGAGGCGGAGAGCTTGACGCCGCCGCCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB682822             [                                                                      ACCATCCCGGAGGCGGAGAGCTTGACGCCGCCGCCGACGAGCCGCAGCGGCGGAGCAAGCGGGAGCGGGAGGTGGGGATGGGGTCGAGCGACGGGGACAAGCCGCTGCGGCGGATCGCGGCGTCGTTCGAGGAGCTCGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCCATATGATGGTGTGCTTT                                                                                                                                                                                                  ]
[+] EMBL AK099097             [                                                                        CATCCCGGAGGCGGAGAGCTTGACGCCGCCGCCGACGAGCCGCAGCGGCGGAGCAAGCGGGAGCGGGAGGTGGGGATGGGGTCGAGCGACGGGGACAAGCCGCTGCGGCGGATCGCGGCGTCGTTCGAGGAGCTCGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGC                                                                                                                             ]
[+] EMBL CF302987             [                                                                                                                                                                                                              CGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AT003489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGACCTGCTGTGCTGTTCTGGATGCTGTTTTTTTAACAGGTGAATGAGAAATTAAGAATTCGTTGTTAGCACATAATGCAGTTTGAAACAACTGAAATTCTATTTGCATAAAAAAAA]


>consensus_12342#0 TCCCCTTCACCTCTACGCGTAAAACCACAACCAAAAGCAAAGCACACGAGAGAGAGACCC ACCCACCCCAACCATCCCGGAGGCGGAGAGCTTGACGCCGCCGCCGACGAGCCGCAGCGG CGGAGCAAGCGGGAGCGGGAGGTGGGGATGGGGTCGAGCGACGGGGACAAGCCGCTGCGG CGGATCGCGGCGTCGTTCGAGGAGCTCGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCG GCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGC CTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTG GAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGC ACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGAT ATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCA GCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCC GTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAA GATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATT CTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCC TACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTAT GTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTT CGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGACCTGCTGTGCTG TTCTGGATGCTGTTTTTTTAACAGGTGAATGAGAAATTAAGAATTCGTTGTTAGCACATA ATGCAGTTTGAAACAACTGAAATTCTATTTGCATAAAAAAAA



consensusID : consensus_12342#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1002
fasta sequence
                              [CTGAATCTGAGCTGCTTAATGCTAGGTGATTATGTCGAAATGATCTGAAATTATCACCTAGATGGCTAGATCAAGTGTCAGGTAGGAATGTCTGCACGCATCAGGATCAGATCACCTAATCCGTGTTGCGATGACTTTGACTTGGTGGATGCTTAGTAGTTTGTGTTAGAATCCTATCCAGTATAGCAGTTACTCGTAAGTTTACTATTTAGCAAACCAGTTTTTCTGTTTATCAGGACCTTGTACTTCTGCAAAATTGATGATAATGCCGCCTTGGTTCCCCCACTAGGCATCCCTTGAGTAACCTGTTTAACTATAACTTGCTTTTCTGAGCTTTTGTTGTGTGTTGTCTGATTTAGTTCCTCTCAATTGAGTGCAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAG-CAAATACTGGTTACAGA--GTAAGTTAACTTAAGGGATNCAGCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGCNCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCCAAGCCTACTTATCCACCTTCGAATGTACTAATCCATTAGACGGTGTCAATAACGCACCGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGAAAAAAAAAAAAAAAAAA]

[+] EMBL CF303798             [CTGAATCTGAGCTGCTTAATGCTAGGTGATTATGTCGAAATGATCTGAAATTATCACCTAGATGGCTAGATCAAGTGTCAGGTAGGAATGTCTGCACGCATCAGGATCAGATCACCTAATCCGTGTTGCGATGACTTTGACTTGGTGGATGCTTAGTAGTTTGTGTTAGAATCCTATCCAGTATAGCAGTTACTCGTAAGTTTACTATTTAGCAAACCAGTTTTTCTGTTTATCAGGACCTTGTACTTCTGCAAAATTGATGATAATGCCGCCTTGGTTCCCCCACTAGGCATCCCTTGAGTAACCTGTTTAACTATAACTTGCTTTTCTGAGCTTTTGTTGTGTGTTGTCTGATTTAGTTCCTCTCAATTGAGTGCAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAG CAAATACTGGTTACAGA  GTAAGTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF303739             [CTGAATCTGAGCTGCTTAATGCTAGGTGATTATGTCGAAATGATCTGAAATTATCACCTAGATGGCTAGATCAAGTGTCAGGTAGGAATGTCTGCACGCATCAGGATCAGATCACCTAATCCGTGTTGCGATGACTTTGACTTGGTGGATGCTTAGTAGTTTGTGTTAGAATCCTATCCAGTATAGCAGTTACTCGTAAGTTTACTATTTAGCAAACCAGTTTTTCTGTTTATCAGGACCTTGTACTTCTGCAAAATTGATGATAATGCCGCCTTGGTTCCCCCACTAGGCATCCCTTGAGTAACCTGTTTAACTATAACTTGCTTTTCTGAGCTTTTGTTGTGTGTTGTCTGATTTAGTTCCTCTCAATTGAGTGCAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTANGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAG CAAATACTGGTTACAGA  GTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BQ907705             [                                                                                                                                                                                                                                                                                                                                                                                                                                               TTGA TTGGACATTCAGAAGGGCACCGTCA GCAAGCTGGGA CCATACTAGGAATATGCTGA GGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCCAAATACTGGTTACAGAGGGCAACT  CCTTAAGGGATNCAGCATCTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGCNCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCCAAGCCTACTTATCCACCTTCGAATGTACTAATCCATTAGACGGTGTCAATAACGCACCGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGAAAAAAAAAAAAAAAAAA]


>consensus_12342#1 CTGAATCTGAGCTGCTTAATGCTAGGTGATTATGTCGAAATGATCTGAAATTATCACCTA GATGGCTAGATCAAGTGTCAGGTAGGAATGTCTGCACGCATCAGGATCAGATCACCTAAT CCGTGTTGCGATGACTTTGACTTGGTGGATGCTTAGTAGTTTGTGTTAGAATCCTATCCA GTATAGCAGTTACTCGTAAGTTTACTATTTAGCAAACCAGTTTTTCTGTTTATCAGGACC TTGTACTTCTGCAAAATTGATGATAATGCCGCCTTGGTTCCCCCACTAGGCATCCCTTGA GTAACCTGTTTAACTATAACTTGCTTTTCTGAGCTTTTGTTGTGTGTTGTCTGATTTAGT TCCTCTCAATTGAGTGCAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATT GCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATAC TAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAAT ACTGGTTACAGAGTAAGTTAACTTAAGGGATNCAGCATCTAAGGCTTATGCTCAGGTTTT TGCTCCTCACCATGGGTGGCNCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTC CCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAA TGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTCTACGTTGAAGATCTGTTTACCT CAAGGAATTTAGGCATGGACTGGTGAACCCAAGCCTACTTATCCACCTTCGAATGTACTA ATCCATTAGACGGTGTCAATAACGCACCGCTTTGTATGTACTGATCCAATATGATGGTGT GCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGT CTATGCGAATCAGCTCAGTGATTGAAAAAAAAAAAAAAAAAA



consensusID : consensus_12342#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 725
fasta sequence
                              [GCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCATTTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTTTTTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAAAAAAAAAAAAAAAAAGA]

[-] EMBL CB682823             [GCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCATTTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTTTTTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAATACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAAAAAAAAAAAAAAAAAGA]


>consensus_12342#2 GCAGGCCCCCGGCCCGGCCATGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTC CGTCCTCTTCGGCTGCCTCGGCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAA GGTTGATGATTTGCTGGAGGCATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTT GGACATTCAGAAGGGCACCGTCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGT TAAGCGTGGGATTGATATGGTTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAA CTCCTTAAGGGATGCAGCATTTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTG GGCCATAAGGAAAGCCGTTGCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCT GAAGAAATTGAATGAAGATGAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGC ATCTGGACCAGTAATTTTTTACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGA CTGGTGAACCAAAGCCTACTTATCCACTTCGAATGTACTAATCCAATTAGACGGTGTCAA TACGCACGCTTTGTATGTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAAT CAGTTGTATCTGGTTTCGACCTGTTAAATAAGCTTCAGTCTATGCGAAAAAAAAAAAAAA AAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12342#0      -----------------------------------------------TCCCCTTCACCTC 13
consensus_12342#2      ------------------------------------------------------------
consensus_12342#1      CTGAATCTGAGCTGCTTAATGCTAGGTGATTATGTCGAAATGATCTGAAATTATCACCTA 60
                                                                                   

consensus_12342#0      TACGCGTAAAACCACAACCAAA-AGCAAAGCACACGAGAGAGAGACCCACCCACCCCAAC 72
consensus_12342#2      ------------------------------------------------------------
consensus_12342#1      GATGGCTAGATCAAGTGTCAGGTAGGAATGTCTGCACGCATCAGGATCAGATCACCTAA- 119
                                                                                   

consensus_12342#0      CATCCCGGAGGCGGAGAGCTTGACGCCGCCGCCGACGAGCCGCA-GCGGCGGAG--CAAG 129
consensus_12342#2      ------------------------------------------------------------
consensus_12342#1      --TCCGTGTTGCGATGACTTTGACTTGGTGGATGCTTAGTAGTTTGTGTTAGAATCCTAT 177
                                                                                   

consensus_12342#0      CGGGAGCGGGAGGTGGGGATGGGGTCGAGCGACGGGGACAAGCCGCTGCGGCGGATCGCG 189
consensus_12342#2      ------------------------------------------------------------
consensus_12342#1      CCAGTATAGCAGTTACTCGTAAGTTTACTATTTAGCAAACCAGTTTTTCTGTTTATCAGG 237
                                                                                   

consensus_12342#0      GCGTCGT---TCGAGGAGCTCGAGGCGGTGGCCAAGCAGCAGGCCCCCGGCCCGGC--CA 244
consensus_12342#2      --------------------------------------GCAGGCCCCCGGCCCGGC--CA 20
consensus_12342#1      ACCTTGTACTTCTGCAAAATTGA--TGATAATGCCGCCTTGGTTCCCCCACTAGGCATCC 295
                                                                *  ****  *  ***  * 

consensus_12342#0      TGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCG 304
consensus_12342#2      TGGAGGTGGGCTCCTTCGCCCGCGCCTGCTCCAACGTCTCCGTCCTCTTCGGCTGCCTCG 80
consensus_12342#1      CTTGAGTAACCTGTTTAACTATAACTTGCT------TTTCTGAGCTTTTGTTGTGTGTTG 349
                            **   **  **  *     * ****      * ** *  ** **    **  * *

consensus_12342#0      GCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGG 364
consensus_12342#2      GCATCGCCTTCAAGTTCGCCGAGATGGACTACGTCGCCAAGGTTGATGATTTGCTGGAGG 140
consensus_12342#1      TC--TGATTT--AGTTCCTCTCAATTGAGTGC-------AGGTTGATGATTTGCTGGAGG 398
                        *   *  **  *****  *   ** ** * *       *********************

consensus_12342#0      CATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCG 424
consensus_12342#2      CATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCG 200
consensus_12342#1      CATCCAAGTCAATCTCAAAATTGCCTGAGATGGTTGAGTTGGACATTCAGAAGGGCACCG 458
                       ************************************************************

consensus_12342#0      TCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGG 484
consensus_12342#2      TCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGG 260
consensus_12342#1      TCAGGCAAGCTGGGAGCCATACTAGGAATATGCTGAGGGTTAAGCGTGGGATTGATATGG 518
                       ************************************************************

consensus_12342#0      TTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCAT 544
consensus_12342#2      TTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGGGCAACTCCTTAAGGGATGCAGCAT 320
consensus_12342#1      TTAAAATTCTGTTTGAGCAAATACTGGTTACAGAGTAAGTTAACTTAAGGGATNCAGCAT 578
                       ***********************************        ********** ******

consensus_12342#0      CTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGG-GCCATAAGGAAAGCCGTT 603
consensus_12342#2      TTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGG-GCCATAAGGAAAGCCGTT 379
consensus_12342#1      CTAAGGCTTATGCTCAGGTTTTTGCTCCTCACCATGGGTGGCNCCATAAGGAAAGCCGTT 638
                        ****************************************  *****************

consensus_12342#0      GCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGAT 663
consensus_12342#2      GCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGAT 439
consensus_12342#1      GCTGCTGGAATGTACGCCCTTCCCTCAAAATCGCAGCTCCTGAAGAAATTGAATGAAGAT 698
                       ************************************************************

consensus_12342#0      GAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTC 723
consensus_12342#2      GAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTTTT 499
consensus_12342#1      GAAAATTCGGCAAAGGTTCAAATGCAGACTTTCATCAGAGCATCTGGACCAGTAATTCTC 758
                       ********************************************************* * 

consensus_12342#0      TACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTAC 783
consensus_12342#2      TACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCAAAGCCTAC 559
consensus_12342#1      TACGTTGAAGATCTGTTTACCTCAAGGAATTTAGGCATGGACTGGTGAACCCAAGCCTAC 818
                       *************************************************** ********

consensus_12342#0      TTATCCAC-TTCGAATGTACTAATCCAATTAGACGGTGTCAATA-CGCAC-GCTTTGTAT 840
consensus_12342#2      TTATCCAC-TTCGAATGTACTAATCCAATTAGACGGTGTCAATA-CGCAC-GCTTTGTAT 616
consensus_12342#1      TTATCCACCTTCGAATGTACTAATCCA-TTAGACGGTGTCAATAACGCACCGCTTTGTAT 877
                       ******** ****************** **************** ***** *********

consensus_12342#0      GTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTT 900
consensus_12342#2      GTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTT 676
consensus_12342#1      GTACTGATCCAATATGATGGTGTGCTTTGAGCTATGACTACAATCAGTTGTATCTGGTTT 937
                       ************************************************************

consensus_12342#0      CGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGACCTGCTGTGCTG 960
consensus_12342#2      CGACCTGTTAAATAAGCTTCAGTCTATGCGAAAAAAAAAAAAAAAAAGA----------- 725
consensus_12342#1      CGACCTGTTAAATAAGCTTCAGTCTATGCGAATCAGCTCAGTGATTGAAAAAAAAAAAAA 997
                       ********************************  *    *   *                

consensus_12342#0      TTCTGGATGCTGTTTTTTTAACAGGTGAATGAGAAATTAAGAATTCGTTGTTAGCACATA 1020
consensus_12342#2      ------------------------------------------------------------
consensus_12342#1      AAAAA------------------------------------------------------- 1002
                                                                                   

consensus_12342#0      ATGCAGTTTGAAACAACTGAAATTCTATTTGCATAAAAAAAA 1062
consensus_12342#2      ------------------------------------------
consensus_12342#1      ------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)