|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1593 fasta sequence
[CGGCCCTTCCGTCCAACCGAGAAGCCGCCCTCCGTCCCCCGAACCGCGAGTCCGCGACGCCGCCCGGACGCCCGAAGCATCGACGCCGAACGGCCGAAGCGCCGACCCCTCGACACGCTGTCCCCGGTCGCGCCTCGCGGGCTCGCGGCGGAAGGGTGGGAGGCGGAGGCTGGAGCCCCGAGCACCGAGCTCCGGGTGGTCAGCCCTTGAAACCCATCCCCTCCACGGACCACGCCGCCAGCC---GCAAAATATTTTGTCCATCACAATTGCCCATGGACTCTGCCGTTGATGGCCCGAGACAACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACAC-GCTGCGGCGAGCGGAAGGCCGCCCTCAAGCGTCCCAAAACCTTAGAGCAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGAAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCGTCGTCACAAATATTGCCTTGATTTGTTTCTCTTATCTGTGGATGAAGGAATTACTGGTTATAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGAAAATAGTTTCCTATAAGGACCTCTATGGCTGGACAATGGATGATATTGTGANAGCAATTGGCCTAAAAAATAACTGTACCTTTTGTGGTGTTTTTCGACGTCAGGCACTGGACCGAGGTGCTGCTCTCTT-AAAGTTGACAAGA-TGTGACTGGACATAATGCTGATGACATTGCAGAAACTGTGTTATTGAATATATTACGTGGTGATATTGCACGGTTAAGTAGATGTACCTTTATAACTACTGGTGAAGATGGGCCAATCCCAAGATGCAAGCCTTTCAAATACACCTACGAGAAGGAGATTGTTATGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCAGAGCAAGGAACATGTGAACGTTGCGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCAAAACTAGGCATAGGCAGGACCAAAGGCATTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATATTTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGGCATGATTCAGTTGTACAAGCTAACTATTTATGATTGTGAGATGGGTTGCTAAACTATCAGCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCGCTCGACACAATGGTCGGCGGCGTGTTGTTACATTATCCGTTTATAAGTACT]
[+] EMBL CB645593 [CGGCCCTTCCGTCCAACCGAGAAGCCGCCCTCCGTCCCCCGAACCGCGAGTCCGCGACGCCGCCCGGACGCCCGAAGCATCGACGCCGAACGGCCGAAGCGCCGACCCCTCGACACGCTGTCCCCGGTCGCGCCTCGCGGGCTCGCGGCGGAAGGGTGGGAGGCGGAGGCTGGAGCCCCGAGCACCGAGCTCCGGGTGGTCAGCCCTTGAAACCCATCCCCTCCACGGACCACGCCGCCAGCC GCAAAATATTTTGTCCATCACAATTGCCCATGGACTCTGCCGTTGATGGCCCGAGACAACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACAC GCTGCGGCGAGCGGAAGGCCGCCCTCAAGCGTCCCAAAACCTTAGAGCAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGAAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCGTCGTCACAAATATTGCCTTGATTTGTTTCTCTTATCTGTGGATGAAGGAATTACTGGTTATAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGAAAATAGTTTCCTATAAGGACCTCTATGGCTGGACAATGGATGATATTGTGANAGCAATTGGCCTAAAAAATAACTGTACCTTTTGTGGTGTTTTTCGACGTCAGGCACTGGACCGAGGTGCTGCTCTCTT AAAGTTGACAAGA TGTGACTGGACATAAT ]
[+] EMBL OS0612A [ CGAGTCCGCGACGCCGCCCGGACGCCCGAAGCATCGACGCCGAAC GNCGAAGCGCCGACCCCTCGACACGCTGTCCCCGGTCGCGCCTCG GGGCTCGCGGCGGAAGGGTGGGAGGCGGAGGCTGGAGCCCCGAGCACCGAGCTCCGGGTGGTCAGCCCTTGAAACCCATCCCCTCCACGGACCACGNCGCCAGCCGCAGCAAAATATTTTGTCCATCACAATTGCCCATGGACTCTGCCGTTGATGGCCCGAGACAACCTNCGGCTAGGGCGGGGAGCCG CTCTGCACACGGTTGCGGCGAGCGGAAGG ]
[+] EMBL AK106684 [ ACGCCGAACGGCCGAAGCGCCGACCCCTCGACACGCTGTCCCCGGTCGCGCCTCGCGGGCTCGCGGCGGAAGGGTGGGAGGCGGAGGCTGGAGCCCCGAGCACCGAGCTCCGGGTGGTCAGCCCTTGAAACCCATCCCCTCCACGGACCACGCCGCCAGCC GCAAAATATTTTGTCCATCACAATTGCCCATGGACTCTGCCGTTGATGGCCCGAGACAACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACAC GCTGCGGCGAGCGGAAGGCCGCCCTCAAGCGTCCCAAAACCTTAGAGCAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGAAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCGTCGTCACAAATATTGCCTTGATTTGTTTCTCTTATCTGTGGATGAAGGAATTACTGGTTATAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGAAAATAGTTTCCTATAAGGACCTCTATGGCTGGACAATGGATGATATTGTGAAAGCAATTGGCCTAAAAAATAACTGTACCTTTTGTGGTGTTTTTCGACGTCAGGCACTGGACCGAGGTGCTGCTCTCTTAAAAGTTGACAAGATTGTGACTGGACATAATGCTGATGACATTGCAGAAACTGTGTTATTGAATATATTACGTGGTGATATTGCACGGTTAAGTAGATGTACCTTTATAACTACTGGTGAAGATGGGCCAATCCCAAGATGCAAGCCTTTCAAATACACCTACGAGAAGGAGATTGTTATGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCAGAGCAAGGAACATGTGAACGTTGCGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCAAAACTAGGCATAGGCAGGACCAAAGGCATTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATATTTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGGCATGATTCAGTTGTACAAGCTAACTATTTATGATTGTGAGATGGGTTGCTAAACTATCAGCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCGCTCGACACAATGGTCGGCGGCGTGTTGTTACATTATCCGTTTATAAGTACT]
[+] EMBL CF304610 [ TGGAGCCCCGAGCACCGAGCTCCGGGTGGTCAGCCCTTGAAACCCATCCCCTCCACGGACCACGCCGCCAGCC GCAAAATATTTTGTCCATCACAATTGCCCATGGACTCTGCCGTTGATGGCCCGAGACAACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACAC GCTGCGGCGAGCGGAAGGCCGCCCTCAAGCGTCCCAAAACCTTAGAGCAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGT ]
[-] EMBL CB645594 [ CAGAAACTGTGTTATTGAATATATTACGTGGTGATATTGCACGGTTAAGTAGATGTACCTTTATAACTACTGGTGAAGATGGGCCAATCCCAAGATGCAAGCCTTTCAAATACACTTACGAGAAGGAGATTGTTATGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCAGAGCAAGGAACATGTGAACGTTGCGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCAAAACTAGGCATAGGCAGGACCAAAGGCATTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATATTTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGGCATGATTCAGTTGTACAAGCTAACTATTTATGATTGTGAGATGGGTTGCTAAACTATCAGCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCGCTCGACACAATGGTCGGCGGCGTGTAGGGACATTATCCGTTTAT ]
consensusID : consensus_12347#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 768 fasta sequence
[TGTATGTTATTATCCTTGACCCTATGACACGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGTAATTTCTGGCTCCTTCCTATGTATAGATGTTCAGGAATCACTGACTAGCATTCTGTAACCAATCCTTCTTTTATACACTAGCAATAATTCTGCTAAAAGAAATCTGCCATATACTTGAATATGTCATGAACTTTTGACAGAAGTATTATCTTCTACCGACTTTGAGATTAAATCCATTTAATTTTTCTGTATTTCATAATTCAGGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCA-GGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCA-GAGCAAGGAACATGTGAACGTTGTGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGCGTCTTGCTGGACGGATTGAATCGAGGCTTGCC-AAACTAGGCGTTGGGAGGACCA-AAGGCGTAGCTGGAGGTGATAGTGACTGTGAGCAGCAGGCC-AAACGTCCGGAGAGGAGCA-GGTCGAGTCTGCAAGGAAAACATGGAAACATCGACTTTTAGATATTATCAGTTTTTTTGCTCAAAGCCTCAAAGGCTTCTGCCGAGATATTTTGTTAAAATGTCATTGTTGGTTTAATACACCTGGATCTTTTTAAATTAATGGAAATAACTTTTTAGGCCTCCAAAAAAAAAAAAAAGA]
[-] EMBL CB619251 [TGTATGTTATTATCCTTGACCCTATGACACGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGTAATTTCTGGCTCCTTCCTATGTATAGATGTTCAGGAATCACTGACTAGCATTCTGTAACCAATCCTTCTTTTATACACTAGCAATAATTCTGCTAAAAGAAATCTGCCATATACTTGAATATGTCATGAACTTTTGACAGAAGTATTATCTTCTACCGACTTTGAGATTAAATCCATTTAATTTTTCTGTATTTCATAATTCAGGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCA GGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCA GAGCAAGGAACATGTGAACGTTGTGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGCGTCTTGCTGGACGGATTGAATCGAGGCTTGCCAAAACTAGGCGTTGGGAGGACCA AAGGCGTAGCTGGAGGTGATAGTGACTGTGAGCAGCAGGCC AAACGTCCGGAGAGGAGCA GGTCGAGTCTGCAAGGAAAACATGGAAACATCGACTTTTAGATATTATCAGTTTTTTTGCTCAAAGCCTCAAAGGCTTCTGCCGAGATATTTTGTTAAAATGTCATTGTTGGTTTAATACACCTGGATCTTTTTAAATTAATGGAAATAACTTTTTAGGCCTCCAAAAAAAAAAAAAAGA]
[+] EMBL BI812091 [ tGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCA GGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCACGAGCAAGGAACATGTGAACGTTGTGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGCGTCTTGCTGGACGGATTGAATCGAGGCTTGCC AAACTAGGCGTTGGGAGGACCACAAGGCGTAGCTGGAGGTGATAGTGACTGTGAGCAGCAGGCCAAAACGTCCGGAGAGGAGCA GGTCGAGTCTGCAAGGAAAACATGGAAACATCGACTTTTAGATATTATCAGTTTTTTTGCTCAAAGCCTCAAAGGCTTCTGCCGAGATATTTTGTTAAAATGTCATTGTTGGTTTAATACACCTGGATCTTTTTAAATTAATGGAAATAACTTTTTAGGCCTCCCAAAAAAAAAA ]
[+] EMBL BI812081 [ ATATATTCACC AATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCACGGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCA GAGCAAGGAACATGTGAAC TTGTGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGCGTCTTGCTGGACGGATTGAATCGAGGCTTGCC AAACTAGGCGTTGGGAGGACCC AAGGCGTAGCTGGAGGTGATAGTGACTGTGAGCAGCAGGCC AACGTCCGGAGAGGAGCACGGTCGAGTCTGCAAGGAAAACATGGAAACATCGACTTTTAGATATTATCAGTTTTTTTGCTCAAAGCCTCAAAGGCTTCTGCCGAGATATTTTGTTAAAATGTCATTGTTGGTTTAATACACCTGGATCTTTTTAAATTAATGGAAATAACTTTTTAGGCCTCCAAAAACCAAAAA ]
consensusID : consensus_12347#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 755 fasta sequence
[TCGGAGCGAGCGCAGCGGCGACGACAAGGGGCGGTTTCCCTTCGGCGGCGGCGGCGGCTCCGGCTCCGGCTCCGGCGAGCCCGCTCTTCTTACCTCCGACGAGCCCCTCATCACTCCGGCGGCCACGAGGCGAGAGCTGAGTGGCGACGCCGGCGAGTCCCCTTCCTCCTCTCCTCGGCCAGCTGCAAAATCCTTTGTCCGTCACAATTGCCCATGGACTCTGCTGTCGATGGCCCGAGACAACCTCCGGCTAGGGCGGGAAGCCGCCTCTGCACACGCTGCGGCGAGCGGAAGGCTGCCCTCAAGCGTCCCAAAACCCTAGAGCAGATATGTAGGGAATGCTTCTACATTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGAGAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGTAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCATCGTCACAAATATTGTCTTGATTTGTTCCTCTTATCTGTGGATGAAGGAATTACTGGTTACAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGAAAATAATTTCTTATAAGGACCTCTATGGCTGGACAATGGATGATATTGTGAAAGCAATTGGCCTAAAAAATAATTGTACCTTTTGTGGTGTTTTTCGACGTCAGGTAATTCTTACTTGCCTCTTTGGTGCAATTTTTTACTAGTTAAAGGTTAA]
[+] EMBL CB619250 [TCGGAGCGAGCGCAGCGGCGACGACAAGGGGCGGTTTCCCTTCGGCGGCGGCGGCGGCTCCGGCTCCGGCTCCGGCGAGCCCGCTCTTCTTACCTCCGACGAGCCCCTCATCACTCCGGCGGCCACGAGGCGAGAGCTGAGTGGCGACGCCGGCGAGTCCCCTTCCTCCTCTCCTCGGCCAGCTGCAAAATCCTTTGTCCGTCACAATTGCCCATGGACTCTGCTGTCGATGGCCCGAGACAACCTCCGGCTAGGGCGGGAAGCCGCCTCTGCACACGCTGCGGCGAGCGGAAGGCTGCCCTCAAGCGTCCCAAAACCCTAGAGCAGATATGTAGGGAATGCTTCTACATTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGAGAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGTAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCATCGTCACAAATATTGTCTTGATTTGTTCCTCTTATCTGTGGATGAAGGAATTACTGGTTACAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGAAAATAATTTCTTATAAGGACCTCTATGGCTGGACAATGGATGATATTGTGAAAGCAATTGGCCTAAAAAATAATTGTACCTTTTGTGGTGTTTTTCGACGTCAGGTAATTCTTACTTGCCTCTTTGGTGCAATTTTTTACTAGTTAAAGGTTAA]
consensusID : consensus_12347#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence
[CCTGCTTCGGAAGTTTTTTTAATCCTGGAACTTAGTAAATAATGAATGGTGCAAGACTAAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTAAGATCTCCACCAACACAGGATGCCAAGCAAAGGAAACATGTGAGTTGCGGCTACATTTCTAGTCAAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCCAAAACTAGGCATAGGCAGGACCACAAGGCACTTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATATTTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGGCATGATTCAGTTGTACAAGCTAACTATTTATGATTGTGAGATGGGTTGCTAAACTATCAGCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCGCTCGACACATGGTCGGCGGCGTGTTGTTACATTATCCGTTTATAAGTACTGTTTGAAACCAATGGTGCGAATCGTTATGCCTTTTGGTTTGGTTTAAAAA]
[+] EMBL BI806517 [CCTGCTTCGGAAGTTTTTTTAATCCTGGAACTTAGTAAATAATGAATGGTGCAAGACTAAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTAAGATCTCCACCAACACAGGATGCCAAGCAAAGGAAACATGTGAGTTGCGGCTACATTTCTAGTCAAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCCAAAACTAGGCATAGGCAGGACCACAAGGCACTTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATATTTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGGCATGATTCAGTTGTACAAGCTAACTATTTATGATTGTGAGATGGGTTGCTAAACTATCAGCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCGCTCGACACATGGTCGGCGGCGTGTTGTTACATTATCCGTTTATAAGTACTGTTTGAAACCAATGGTGCGAATCGTTATGCCTTTTGGTTTGGTTTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 CGGCCCTTCCGTCCAACCGAGAAGCCGCCCTCCGTCCCCCGAACCGCGAGTCCGCGACGC 60
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 CGCCCGGACGCCCGAAGCATCGACGCCGAACGGCCGAAGCGCCGACCCCTCGACACGCTG 120
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 TCCCCGGTCGCGCCTCGCGGGCTCGCGGCGGAAGGGTGGGAGGCGGAGGCTGGAGCCCCG 180
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 AGCACCGAGCTCCGGGTGGTCAGCCCTTGAAACCCATCCCCTCCACGGACCACGCCGCCA 240
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 GCCGCAAAATATTTTGTCCATCACAATTGCCCATGGACTCTGCCGTTGATGGCCCGAGAC 300
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 AACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACACGCTGCGGCGAGCGGAAGGCCGCCC 360
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 TCAAGCGTCCCAAAACCTTAGAGCAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGG 420
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 ATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCA 480
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 TTGGAGCTTCTGGTGGAAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATC 540
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 GTCGTCACAAATATTGCCTTGATTTGTTTCTCTTATCTGTGGATGAAGGAATTACTGGTT 600
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 ATAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGA 660
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 AAATAGTTTCCTATAAGGACCTCTATGGCTGGACAATGGATGATATTGTGANAGCAATTG 720
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 ------TGTATGTTATTATCCTTGACCCTATGACACGTATGCATATTTCAAAAAGCTGGA 54
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 GCCTAAAAAATAACTGTACCTTTTGTGGTGTTTTTCGACGTCAGGCACTGGACCGAGGTG 780
consensus_12347#2 -------------------------TCGGAGCGAGCGCAGCGGCGACGACAAGGGGCGGT 35
consensus_12347#1 CTACTTCTCCACAGAATGTAATTTCTGGCTCCTTCCTATGTATA-GATGTTCAGGAATCA 113
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 CTGCTCTCTTAAAGTTGACAAGATGTGACTGGACATAATGCTGATGACATTGCAGAAACT 840
consensus_12347#2 TTCCCTTCGGCGGCGGCGGCGGCTCCGGCTCCGGCTCCGGCGAGCCCGCTCTTCTTACCT 95
consensus_12347#1 CTGACTAGCATTCTGTAAC-----CAATCCTTCTTTTATACACTAGCAATAATTCTGCTA 168
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 GTGTTATTGAATATATTAC-----GTGGTGATATTGCACGGTTAAGTAGATGTACCTTTA 895
consensus_12347#2 CCGACGAGCCCCTCATCACTCCGGCGGCCACGAGGCGAGAGCTGAGTGGCGACGCCGGCG 155
consensus_12347#1 AAAGAAATCTGCCATATACTTGAATAT-GTCATGAACTTTTGACAGAAGTATTATCTTCT 227
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 TAACTACTGGTGAAGATGGGCCAATCCCAAGATGCAAGCCTTTCAAATACACCTACGAGA 955
consensus_12347#2 AGTCCCCTTCCTCCTCTCCTCGGCCAGCTGCAAAATCCTTTGTCCGTCACA--ATTGCCC 213
consensus_12347#1 ACCGACTTTGAGATTAAATCCATTTAATTTTTCTGTATTTCATAATTC----AGGCATAT 283
consensus_12347#3 ------------------------------------------------------------
consensus_12347#0 AGGAGATTGTTATGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGCATAT 1015
consensus_12347#2 ATGGACTCTGCTGTCGATGGCCCGAGACAACCTCCGGCTAGGGCGGGA----AGCCGCCT 269
consensus_12347#1 ATTCACCAAATGCATACCGTGGAT--TTGCTCGCGAATTTATTAAAGATCTGGAAAGGAT 341
consensus_12347#3 -----CCTGCTTCGGAAGTTTTTT--TAATCCTGGAACTTAGTAAATAA-TGAATGGTGC 52
consensus_12347#0 ATTCACCAAATGCATACCGTGGAT--TTGCTCGCGAATTTATTAAAGATCTGGAAAGGAT 1073
consensus_12347#2 CTGCACACGCTGCGGCGAGCGGAAGGCTGCCCTCAAGCGTCCCAAAACCCTAGAGCAGAT 329
* * * * * * *** * *
consensus_12347#1 GAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAAC 401
consensus_12347#3 AAGACTAAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTT-AAGATCTCCACCAA 111
consensus_12347#0 GAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAAC 1133
consensus_12347#2 ATG-TAGGGAATGCTTCT--ACATTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGA 386
* ** * ** **** * * ***** **
consensus_12347#1 AACAAGGATGCCAGAGC--AAGGAACATGTGAACGTTGTGGCTACATTTCTAGTCA-GAA 458
consensus_12347#3 CACA-GGATGCCA-AGC--AAAGGAAACATGTGAGTTGCGGCTACATTTCTAGTCAAGAA 167
consensus_12347#0 AACAAGGATGCCAGAGC--AAGGAACATGTGAACGTTGCGGCTACATTTCTAGTCA-GAA 1190
consensus_12347#2 GAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTC--TGGTGGTAA--AG 442
* ** * * * ** *** *** * * * ** * *
consensus_12347#1 ATTATGCAAAGCATGCGTCT-TGCTGGACGGATTGAATCGAGGCTTGCC--AAACTAGGC 515
consensus_12347#3 ATTATGCAAAGCATGTGTCT-TGCTGGACGGATTGAATCGAGGCTTACCCAAAACTAGGC 226
consensus_12347#0 ATTATGCAAAGCATGTGTCT-TGCTGGACGGATTGAATCGAGGCTTACC-AAAACTAGGC 1248
consensus_12347#2 ATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCA----TCGTCACAAATATTGT 498
*** * ** * * * **** * ** **** * * *** *
consensus_12347#1 GTTGGGAGGACCA-AAGGCG-TAGCTGGAGGTGATAGTGACTGTGAGCAGCAGGCCAAAC 573
consensus_12347#3 ATAGGCAGGACCACAAGGCACTTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACAC 286
consensus_12347#0 ATAGGCAGGACCA-AAGGCA-TTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACAC 1306
consensus_12347#2 CTTGATTTGTTCC-----TCTTATCTGTGGATGA-AGGAATTACTGGTTACAG---AGAC 549
* * * * * *** * *** * * * * ** * **
consensus_12347#1 GTCCGGAGAGGAGCAGGTCGAGTCTGCAAGGAAAACATGGAAACATCGACTTTTAGATAT 633
consensus_12347#3 GTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATAT 346
consensus_12347#0 GTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAGATAT 1366
consensus_12347#2 GACTCACTAGAAACTGTTAAAA--GGAATGAAATACAGTATGGCCTGCCATTGAAAATAA 607
* ** * * * * * * * * ** *** * * ** * ***
consensus_12347#1 T--ATCAGTTTTTTTGCT--CAAAGCCTCAAAGGCTTCTG---CCGAGATATTTTGT-TA 685
consensus_12347#3 TTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGG-CA 405
consensus_12347#0 TTCAACTGTAATTTTGTTACCATGTCATTGTTGGTTTACGACACCTGGATCATTTGG-CA 1425
consensus_12347#2 TTTCTTATAAGGACCTCTA-TGGCTGGACAATGGATGATATTGTGAAAGCAATTGGCCTA 666
* * ** * ** * *
consensus_12347#1 AAATGTCATTGT-----------TGGTTTAATACACCTGG-ATC--TTTTTAAATTAATG 731
consensus_12347#3 TGATTCAGTTGTACAAGCTA--ACTATTTATGATTGTGAG-ATGGGTTGCTAAACTATCA 462
consensus_12347#0 TGATTCAGTTGTACAAGCTA--ACTATTTATGATTGTGAG-ATGGGTTGCTAAACTATCA 1482
consensus_12347#2 AAAAATAATTGTACCTTTTGTGGTGTTTTTCGACGTCAGGTAATTCTTACTTGCCTCTTT 726
* **** *** * * * ** * *
consensus_12347#1 G-AAATAACTTTTTAGGCCTCCAAAAAAAAAAAAAAGA---------------------- 768
consensus_12347#3 GCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCG 522
consensus_12347#0 GCAAGCTGATTTTACAGCATCTGTAGTTCTGTACATGATGCGCGAAGGCCAGAAGCACCG 1542
consensus_12347#2 G-GTGCAATTTTTTACTAGTTAAAGGTTAA------------------------------ 755
* **** *
consensus_12347#1 ------------------------------------------------------------
consensus_12347#3 CTCGACACA-TGGTCGGCGGCGTGTTGTTACATTATCCGTTTATAAGTACTGTTTGAAAC 581
consensus_12347#0 CTCGACACAATGGTCGGCGGCGTGTTGTTACATTATCCGTTTATAAGTACT--------- 1593
consensus_12347#2 ------------------------------------------------------------
consensus_12347#1 -----------------------------------------
consensus_12347#3 CAATGGTGCGAATCGTTATGCCTTTTGGTTTGGTTTAAAAA 622
consensus_12347#0 -----------------------------------------
consensus_12347#2 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||