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Oryza sativa
cluster # 12356 cluster # 12356       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12356#0 length = 1546 sequences # 9  
consensus_12356#1 length = 961 sequences # 1  

consensusID : consensus_12356#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1546
fasta sequence
                              [TCCCCTTCCTCCGGCTCTCCGCTGCAGGCACGCCGCACGCCGCCACCGCCAGCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTCCTCTCGCGTGCGCGGTGCGCCGCCGCGTCCTCCTGCTGCCGTCGACGCGGGCGCGGCGCCAGCAGCCGCCGTCGCGCGGCCGGGAGCTGTCGCGGCCGCGCCGCCGGGAGCCGCCGTCGCCGGGAGGACGCCATCCGCCGGGAGCCTCTGTCGCCGCGCCGCCGGGAGCACGCCATCCGCCATCGGCCGACCATGGCTTCGGCCTCCCCCCGCGTAAGCTACGATGCAAGCTATGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAGAGGTTACTCTTAAGTTGCA-CCGTGATGGAAAA-TTGAGCAGTTTGGATAGTTCCTCAGGGAAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACCGGAGAAGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTAAGAAGTCTGCAGGTTCTTCAAAGAAGACGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACCGCAGCAGCCAAGGCTCAGCGCTATCGCTGGGCCAACAGAGTGCCGAGCCCGCGCACAAACACAATCAGAAGAGAAAGGATGAGAGCGGTTTGGGGCACTCGAATGTATCGGGCAAGTCGGCCGAAGGATCCCAGGTTCGTGGTGGCGACAGCGGCACGACCTCGGAGGTTCCTCAGACGCCAGTGGAGAAATCCAAGAAGAACAAGAAGGTTAGGATCGCAGAGT-AAGCAGTATCATCGTAGCTCAGGGGGTCAGGAGAAGAGAGGTTAATTTTCCCTGAACTGTCGGCACTCCCCCGGAGCTTTGCAGGAAAGGCGTCTTGAATTTCCTAAGCATTTAGGTTGACTCAATTGCATTTTTGTGATGAGGCTCGAGGGCTGCAGCCCCATGCATGATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTGAAGAAGACATGTTTGGTTGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAATCACCTTCTACTTGTTGCTAGCCATGGAATGTAACATCTTTTGCATGAATCACACAAATGAGACCTGAGCTGTTTTGCCTGTCAAGCCTTCACCTTCACTGTTCGTCGTTGCGGCGCTCGTCCATCCATCTGAGCGGCTTTGGTCTGATTTGTCTTTGCGTCGGTTTAATTGGTTTGCTACCAATCTTGCTCTCCAAAAGGAGCTTATTATCCTATATGTATTTTTGATTTGATGCTCCTGTTTTTTCTTCTCTCTGAACTGAGCATAGGGGTCAAATATAGGCAAATTTGATGTTCTAAAAAAAAAAAA]

[+] EMBL CB620257             [TCCCCTTCCTCCGGCTCTCCGCTGCAGGCACGCCGCACGCCGCCACCGCCAGCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTCCTCTCGCGTGCGCGGTGCGCCGCCGCGTCCTCCTGCTGCCGTCGACGCGGGCGCGGCGCCAGCAGCCGCCGTCGCGCGGCCGGGAGCTGTCGCGGCCGCGCCGCCGGGAGCCGCCGTCGCCGGGAGGACGCCATCCGCCGGGAGCCTCTGTCGCCGCGCCGCCGGGAGCACGCCATCCGCCATCGGCCGACCATGGCTTCGGCCTCCCCCCGCGTAAGCTACGATGCAAGCTATGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAGAGGTTACTCTTAAGTTGCA CCGTGATGGAAAA TTGAGCAGTTTGGATAGCTCCTCAGGGAAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACCGGAGAAGCCAGGTTTGGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB619622             [                          GGCACGCCGCACGCCGCCACCGCCAGCCGTTCGCCTGTTCCAGACGCGCCGCGCCCGCGCCGCCGCCTCCTCTCGCGTGCGCGGTGCGCCGCCGCGTCCTCCTGCTGCCGTCGACGCGGGCGCGGCGCCAGCAGCCGCCGTCGCGCGGCCGGGAGCTGTCGCGGCCGCGCCGCCGGGAGCCGCCGTCGCCGGGAGGACGCCATCCGCCGGGAGCCTCTGTCGCCGCGCCGCCGGGAGCACGCCATCCGCCATCGGCCGACCATGGCTTCTGTTTCCCCCCGCGTAAGCTACGATGCAAGCTATGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAGAGGTTACTCTTAAGTTGCA CCGTGATGGAAAA TTGAGCAGTTTGGATAGTTCCTCAGGGAAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACCGGAGAAGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTAAGAAGTCTGCAGGTTCTTCAAAGAAGACGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACCGCAGCAGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU176403             [                                                                                                                                                                                                                                             AGCCTCTGTCGCCGCGCCGCCGGGAGCACGCCATCCGCCATCGGCCGACCATGGCTTCGGCCTCCCCCCGCGTAAGCTACGATGCAAGCTATGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAGAGGNTACTCTTAAGTTGCACCCGTGATGGAAAATTTGAGCAGTTTGGATAG TCCTtaag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF326677             [                                                                                                                                                                                                                                                                                                                    GTAAGCTACGATGCAAGCTATGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAGAGGTTACTCTTAAGTTGCA CCGTGATGGAAAA TTGAGCAGTTTGGATAGTTCCTCAGGGAAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACCGGAGAAGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTAAGAAGTCTGCAGGTTCTTCAAAGAAGACGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACCGCAGCAGCCAAGGCTCAGCGCTATCGCTGGGCCAACAGAGTGCCGAGCCCGCGCACAAACACAATCAGAAGAGAAAGGATGAGAGCAGTTTGGGGCACTCGAATGTATCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB620258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGCCTGCGCACAAACACAATCAGAAGAGAAAGGATGAGAGCGGTTTGGGGCACTCGAATGTATCGGGCAAGTCGGCCGAAGGATCCCAGGTTCGTGGTGGCGACAGCGGCACGACCTCGGAGGTTCCTCAGACGCCAGTGGAGAAATCCAAGAAGAACAAGAAGGTTAGGATCGCAGAGT AAGCAGTATCATCGTAGCTCAGGGGGTCAGGAGAAGAGAGGTTAATTTTCCCTGAACTGTCGGCACTCCCCCGGAGCTTTGCAGGAAAGGCGTCTTGAATTTCCTAAGCATTTAGGTTGACTCAATTGCATTTTTGTGATGAGGCTCGAGGGCTGCAGCCCCATGCATGATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTGAAGAAGACATGTTTGGTTGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAATCACCTTCTACTTGTTGCTAGCCATGGAATGTAACATCTTTTGCATGAATCACACAAATGAGACCTGAGCTGTTTTGCCTGTCAAGCCTTCACCTTCACTGTTCGTCGTTGCGGCGCTCGTCCATCCATCTGAGCGGCTTTGGTCTGATTTGTCTTTGCGTCGGTTTAATTGGTTTGCTACCAATCTTGCTCTCCAAAAGGAGCTTATTATCCTATATGTATTTTTGATTTGATGCTCCTGTTTTTTCTTCTCTCTGAACTGAGCATAGGGGTCAAATATAGGC                          ]
[-] EMBL CB619623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGGATGAGAGCGGTTTGGGGCACTCGAATGTATCGGGCAAGTCGGCCGAAGGATCCCAGGTTCGTGGTGGCGACAGCGGCACGACCTCGGAGGTTCCTCAGACGCCAGTGGAGAAATCCAAGAAGAACAAGAAGGTTAGGATCGCAGAGT AAGCAGTATCATCGTAGCTCAGGGGGTCAGGAGAAGAGAGGTTAATTTTCCCTGAACTGTCGGCACTCCCCCGGAGCTTTGCAGGAAAGGCGTCTTGAATTTCCTAAGCATTTAGGTTGACTCAATTGCATTTTTGTGATGAGGCTCGAGGGCTGCAGCCCCATGCATGATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTGAAGAAGACATGTTTGGTTGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAATCACCTTCTACTTGTTGCTAGCCATGGAATGTAACATCTTTTGCATGAATCACACAAATGAGACCTGAGCTGTTTTGCCTGTCAAGCCTTCACCTTCACTGTTCGTCGTTGCGGCGCTCGTCCATCCATCTGAGCGGCTTTGGTCTGATTTGTCTTTGCGTCGGTTTAATTGGTTTGCTACCAATCTTGCTCTCCAAAAGGAGCTTATTATCCTATATGTATTTTTGATTTGATGCTCCTGTTTTTTCTTCTCTCTGAACTGATCAAAGGGGTCAAATATAGGCAAA                       ]
[+] EMBL CF328976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCGCAGAGTAAAGCAGTATCATCGTAGCTCGGGGGGTCAGGAGAAGAGAGGTTAATTTTCCCTGAACTGTCGGCACTCCCCCGGAGCTTTGCAGGAAAGGCGTCTGGAATTTCCTGAGCATTTAGGTTGACTCAATTGCATTTCTGTGATGAGGCTCGAGGGCTGCAGCCCCATGCATGATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTTAAGAAGACATGTTTGGTCGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAAGCACCTTCTACTTGTTGCAAGCCATGGAATGTAACATCTTTTGCATGAATCACAAAAAaaaaaaaa                                                                                                                                                                                                                                                    ]
[-] EMBL CF328977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCCTGAACTGTCGGCACTCCCCCGGAGCTTTGCAGGAAAGGCGTCTGGAATTTCCTGAGCATTTAGGTTGACTCAATTGCATTTCTGTGATGAGGCTCGAGGGCTGCAGCCCCATGCATAATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTTAAGAAGACATGTTTGGTCGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAAGCCCCTTCTACTTGTTGCAAGCCATGGAATGTAACATCTTTTGCATGAATCCCAAAAAaaaaaaaa                                                                                                                                                                                                                                                    ]
[+] EMBL CA757423             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAGGCTCGAGGGCTGCAGCCCCATGCATGATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTGAAGAAGACATGTTTGGTTGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAATCACCTTCTACTTGTTGCTAGCCATGGAATGTAACATCTTTTGCATGAATCACACAAATGAGACCTGAGCTGTTTTGCCTGTCAAGCCTTCACCTTCACTGTTCGTCGTTGCGGCGCTCGTCCATCCATCTGAGCGGCTTTGGTCTGATTTGTCTTTGCGTCGGTTTAATTGGTTTGCTACCAATCTTGCTCTCCAAAAGGAGCTTATTATCCTATATGTATTTTTGATTTGATGCTCCTGTTTTTTCTTCTCTCTGAACTGAGCATCCGAGTCAAATATAGGCAAATTTGATGTTCTAAAAAAAAAAAA]


>consensus_12356#0 TCCCCTTCCTCCGGCTCTCCGCTGCAGGCACGCCGCACGCCGCCACCGCCAGCCGTTCGC CTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTCCTCTCGCGTGCGCGGTGCGCCGCCG CGTCCTCCTGCTGCCGTCGACGCGGGCGCGGCGCCAGCAGCCGCCGTCGCGCGGCCGGGA GCTGTCGCGGCCGCGCCGCCGGGAGCCGCCGTCGCCGGGAGGACGCCATCCGCCGGGAGC CTCTGTCGCCGCGCCGCCGGGAGCACGCCATCCGCCATCGGCCGACCATGGCTTCGGCCT CCCCCCGCGTAAGCTACGATGCAAGCTATGAGCCTGGACCGGCATTTGAGGAGAACAGCG AAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGC CTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAGAGGTTACTCTTAAGTTGCACC GTGATGGAAAATTGAGCAGTTTGGATAGTTCCTCAGGGAAATCTTATGATCTTGTTAGCT TTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTG TTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACCGGAGA AGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTAAGAAGTCTGCAGGTTCTTCAAAGAAGA CGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACCGCAGCAGCCAAGGCTCAGCGCTATCGC TGGGCCAACAGAGTGCCGAGCCCGCGCACAAACACAATCAGAAGAGAAAGGATGAGAGCG GTTTGGGGCACTCGAATGTATCGGGCAAGTCGGCCGAAGGATCCCAGGTTCGTGGTGGCG ACAGCGGCACGACCTCGGAGGTTCCTCAGACGCCAGTGGAGAAATCCAAGAAGAACAAGA AGGTTAGGATCGCAGAGTAAGCAGTATCATCGTAGCTCAGGGGGTCAGGAGAAGAGAGGT TAATTTTCCCTGAACTGTCGGCACTCCCCCGGAGCTTTGCAGGAAAGGCGTCTTGAATTT CCTAAGCATTTAGGTTGACTCAATTGCATTTTTGTGATGAGGCTCGAGGGCTGCAGCCCC ATGCATGATATGCTGGAGTTATATCGTTATGGTTTATGTATCTTGAAGAAGACATGTTTG GTTGGGCCTGAAGCTTGGTCGACAGGGCTTTACAAATCACCTTCTACTTGTTGCTAGCCA TGGAATGTAACATCTTTTGCATGAATCACACAAATGAGACCTGAGCTGTTTTGCCTGTCA AGCCTTCACCTTCACTGTTCGTCGTTGCGGCGCTCGTCCATCCATCTGAGCGGCTTTGGT CTGATTTGTCTTTGCGTCGGTTTAATTGGTTTGCTACCAATCTTGCTCTCCAAAAGGAGC TTATTATCCTATATGTATTTTTGATTTGATGCTCCTGTTTTTTCTTCTCTCTGAACTGAG CATAGGGGTCAAATATAGGCAAATTTGATGTTCTAAAAAAAAAAAA



consensusID : consensus_12356#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 961
fasta sequence
                              [GGTTCCGGGGGTGGGGGCTCCGGCTCCCCGCTGCAGGCACGCCGCACGCCGCCACCGCCAGCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTACTCTCGCGTGCGCGGTGCGCCGCCGTGTACTCCTGGTGGCGTCAACGCGGGCGCGGGGGCAGCATCCAGCGTGGCGCGGGCGGGAGCTGATTAAAGACCCGCCCCCAGATAGCAGTCGAAGCCACCACGGCCGCTATCCTGTCCGAAGGCGTATAGCGCCCTAGCGGTGCTGGTATTCCGTATTGGGTGTTAAAAAAATACGGCGCGCCTTAGCACGCCGGACGCGGGGGCGATCAGGAGGTGTGAATATATTCCACCCGGCGCAGAAGCCGCTGGGCACGTTTAGCTCGGGTCGGCATGGGCAAGCCTGCAGGGAGCGAGGGCATAGGTGGCAAGAACAAGGATGCGGAGCGTGGGTTCGGCGGAGAGGTGGACGTGTAAAGATAAAGACAGAACGCTCATAAGAGGCGAGAAGACGAGCAAGGCGGAGCTGAGAGAGAGGAGGTAGGAAAGTGAGTGAAAAGGAGAGGGCGAAGACGGGGAGCAGGGCGGGAAGCACAACGAGTAACGCAGGGAGGAGGGCACCGCGGGCCTTGATTAGTCATGCAAGCGTACAGGCGCACAGATGGCGATGCGCGCGAGACGTAGCTGCGGGCAGGGGGGCGGGCCAGGCATGGGAGAGGAAGAGACACGGAGTAGCGGGGAGAACAGAAGAGAATAAGTAATGACCCACTTTGATGTGCCGAGAGAGGAGAGCAGCGGAGTGGATCCGCGCGATACAAAGCGAAATTGTAGAGAGCAGCAACAAACAGCCGACGCACCCAACGCACACCCGCCACCGCTAGGATCAGCGGGGGCACGCTCACGATGGGGAAGGACGACGGCGGCGGCATGAGAGAGTGTAGCACGGAAAGAAT]

[+] EMBL BE040020             [GGTTCCGGGGGTGGGGGCTCCGGCTCCCCGCTGCAGGCACGCCGCACGCCGCCACCGCCAGCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTACTCTCGCGTGCGCGGTGCGCCGCCGTGTACTCCTGGTGGCGTCAACGCGGGCGCGGGGGCAGCATCCAGCGTGGCGCGGGCGGGAGCTGATTAAAGACCCGCCCCCAGATAGCAGTCGAAGCCACCACGGCCGCTATCCTGTCCGAAGGCGTATAGCGCCCTAGCGGTGCTGGTATTCCGTATTGGGTGTTAAAAAAATACGGCGCGCCTTAGCACGCCGGACGCGGGGGCGATCAGGAGGTGTGAATATATTCCACCCGGCGCAGAAGCCGCTGGGCACGTTTAGCTCGGGTCGGCATGGGCAAGCCTGCAGGGAGCGAGGGCATAGGTGGCAAGAACAAGGATGCGGAGCGTGGGTTCGGCGGAGAGGTGGACGTGTAAAGATAAAGACAGAACGCTCATAAGAGGCGAGAAGACGAGCAAGGCGGAGCTGAGAGAGAGGAGGTAGGAAAGTGAGTGAAAAGGAGAGGGCGAAGACGGGGAGCAGGGCGGGAAGCACAACGAGTAACGCAGGGAGGAGGGCACCGCGGGCCTTGATTAGTCATGCAAGCGTACAGGCGCACAGATGGCGATGCGCGCGAGACGTAGCTGCGGGCAGGGGGGCGGGCCAGGCATGGGAGAGGAAGAGACACGGAGTAGCGGGGAGAACAGAAGAGAATAAGTAATGACCCACTTTGATGTGCCGAGAGAGGAGAGCAGCGGAGTGGATCCGCGCGATACAAAGCGAAATTGTAGAGAGCAGCAACAAACAGCCGACGCACCCAACGCACACCCGCCACCGCTAGGATCAGCGGGGGCACGCTCACGATGGGGAAGGACGACGGCGGCGGCATGAGAGAGTGTAGCACGGAAAGAAT]


>consensus_12356#1 GGTTCCGGGGGTGGGGGCTCCGGCTCCCCGCTGCAGGCACGCCGCACGCCGCCACCGCCA GCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTACTCTCGCGTGCGCGGT GCGCCGCCGTGTACTCCTGGTGGCGTCAACGCGGGCGCGGGGGCAGCATCCAGCGTGGCG CGGGCGGGAGCTGATTAAAGACCCGCCCCCAGATAGCAGTCGAAGCCACCACGGCCGCTA TCCTGTCCGAAGGCGTATAGCGCCCTAGCGGTGCTGGTATTCCGTATTGGGTGTTAAAAA AATACGGCGCGCCTTAGCACGCCGGACGCGGGGGCGATCAGGAGGTGTGAATATATTCCA CCCGGCGCAGAAGCCGCTGGGCACGTTTAGCTCGGGTCGGCATGGGCAAGCCTGCAGGGA GCGAGGGCATAGGTGGCAAGAACAAGGATGCGGAGCGTGGGTTCGGCGGAGAGGTGGACG TGTAAAGATAAAGACAGAACGCTCATAAGAGGCGAGAAGACGAGCAAGGCGGAGCTGAGA GAGAGGAGGTAGGAAAGTGAGTGAAAAGGAGAGGGCGAAGACGGGGAGCAGGGCGGGAAG CACAACGAGTAACGCAGGGAGGAGGGCACCGCGGGCCTTGATTAGTCATGCAAGCGTACA GGCGCACAGATGGCGATGCGCGCGAGACGTAGCTGCGGGCAGGGGGGCGGGCCAGGCATG GGAGAGGAAGAGACACGGAGTAGCGGGGAGAACAGAAGAGAATAAGTAATGACCCACTTT GATGTGCCGAGAGAGGAGAGCAGCGGAGTGGATCCGCGCGATACAAAGCGAAATTGTAGA GAGCAGCAACAAACAGCCGACGCACCCAACGCACACCCGCCACCGCTAGGATCAGCGGGG GCACGCTCACGATGGGGAAGGACGACGGCGGCGGCATGAGAGAGTGTAGCACGGAAAGAA T



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12356#0      ---------TCCCCTTCCTCCGGCTCTCCGCTGCAGGCACGCCGCACGCCGCCACCGCCA 51
consensus_12356#1      GGTTCCGGGGGTGGGGGCTCCGGCTCCCCGCTGCAGGCACGCCGCACGCCGCCACCGCCA 60
                                        ********* *********************************

consensus_12356#0      GCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTCCTCTCGCGTGCGCGGT 111
consensus_12356#1      GCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGCCGCCTACTCTCGCGTGCGCGGT 120
                       ******************************************* ****************

consensus_12356#0      GCGCCGCCGCGTCCTCCTGCTGCCGTCGACGCGGGCGCGGCGCCAGCAGCCGCCGTCGCG 171
consensus_12356#1      GCGCCGCCGTGTACTCCTGGTGGCGTCAACGCGGGCGCGGGGGCAGCATCCAGCGTGGCG 180
                       ********* ** ****** ** **** ************ * ***** **  *** ***

consensus_12356#0      CGGCCGGGAGCTG-TCGCGGCCGCGCCGCCGGG-AGCCGCCGTCGCCGGGA-GGACGCCA 228
consensus_12356#1      CGGGCGGGAGCTGATTAAAGACCCGCCCCCAGATAGCAGTCGAAGCCACCACGGCCGCTA 240
                       *** ********* *    * * **** ** *  *** * **  ***   * ** *** *

consensus_12356#0      TCCG--CCGGGAGCCTCTGTCGCCGCGCCGCCGGGAGCACGCC--ATCCGCCATCGGCCG 284
consensus_12356#1      TCCTGTCCGAAGGCGTATAGCGCCCTAGCGGTGCTGGTATTCCGTATTGGGTGTTAAAAA 300
                       ***   ***   ** * *  ****    **  *   * *  **  **  *   *      

consensus_12356#0      ACCATGGC-----TTCGGCCTCCCCCCGCGTAAGCTACGATGCAAGCTATGAGCCTGGAC 339
consensus_12356#1      AATACGGCGCGCCTTAGCACGCCGGACGCGGGGGCGATCAGG--AGGTGTGAATATATTC 358
                       *  * ***     ** *  * **   ****   ** *  * *  ** * ***   *   *

consensus_12356#0      CGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAG 399
consensus_12356#1      CACCCGGCGCAGAAGCCGCTGGGCACGTTTAGCTCGGGTCGGCATGGGCA-AGCCTGCAG 417
                       *  *    *  **   *   *   * * *  *** *      **    ** ** *  ***

consensus_12356#0      AACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGTCAAG 459
consensus_12356#1      GG----AGCGAGGGCATAGGTGGCAAGAACAA--GGATGCGGAGCGTGGGTTCGGCGGAG 471
                              ** *   **  **   * * * **    ******     *      **   **

consensus_12356#0      AGGTTACTCTTAAGTTGCACCGTGATGGAAAATTGAGCAGTT-TGGATAGTTCCTCAGGG 518
consensus_12356#1      AGGTGGACGTGTAA--AGATAAAGACAGAACGCTCATAAGAGGCGAGAAGACGAGCAAGG 529
                       ****     *  *     *    **  ***   * *  **    *   **     ** **

consensus_12356#0      AAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCA 578
consensus_12356#1      CGGAGCTGAGAGAGAGG-AGGTAGGAAAGTGAGTGAAAAGGAGAGGGCGAAGACGGGG-A 587
                             *  **    *  ** *  *    * **  *  **  *     *    *     *

consensus_12356#0      TCCGGACCAGAAGCAAAA-----GCTGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTC 633
consensus_12356#1      GCAGGGCGGGAAGCACAACGAGTAACGCAGGGAGGAGGGCACCGCGGGC---CTTGATTA 644
                        * ** *  ****** **        *  **** **  ****  ** *    ***  ** 

consensus_12356#0      GTTATCCTGACCCTGAAGAACCGGAGAAGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTA 693
consensus_12356#1      GTCATGCAAGCGTACAGGCGCACAGATGGCGATGCGCGCGAGACGTAGCTGCGGGCAGGG 704
                       ** ** *   *    * *  *       ** * *   * *     *  ** *  ****  

consensus_12356#0      AGAAGTCTGCAGGTTCTTCAAAGAAGACGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACC 753
consensus_12356#1      GGGCGGGC-CAGG--CATGGGAGAGGAAGAGACACGGAGTAGCGGGGAGAAC--AGAAGA 759
                        *  *    ****  * *   *** ** ***     *  *  *  *  *  *  ****  

consensus_12356#0      GCAGCAGCCAAGGCTCAGCGCTAT-CGCTGGGCCAACAGAGTGCCGAGCCCGCGCACAAA 812
consensus_12356#1      GAATAAGTAATGACCCACTTTGATGTGCCGAGAGAGGAGAGCAGCGGA---GTGGATCCG 816
                       * *  **  * * * **     **  ** * *  *  ****   **     * * *    

consensus_12356#0      CACAATCAGAAGAGAAAGGAT-GAGAGCGGTTTGGGGCACTCGAATGTATCGGGCAAGTC 871
consensus_12356#1      CGCGATACAAAGCGAAATTGTAGAGAGCAGCAACAAACAGCCGA-CGCACCCAAC--GCA 873
                       * * **   *** ****   * ****** *       **  ***  * * *   *  *  

consensus_12356#0      GGCCGAAGGATCCCAGGTTCGTGGTGGCGACAGCGGCACGACCTCGGAGGTTCCTCAGAC 931
consensus_12356#1      CACCCGCCACCGCTAGGATC--AGCGGGGGCACGCTCACGATGGGGAAGG--------AC 923
                         **        * *** **   * ** * **    *****    * ***        **

consensus_12356#0      GCCAGTGGAGAAATCCAAGAAGAACAAGAAGGTTAGGATCGCAGAGTAAGCAGTATCATC 991
consensus_12356#1      GACGGCGGCGGCATG-AGAGAGTGTAGCACGGAAAGAAT--------------------- 961
                       * * * ** *  **  *   **   *  * **  ** **                     

consensus_12356#0      GTAGCTCAGGGGGTCAGGAGAAGAGAGGTTAATTTTCCCTGAACTGTCGGCACTCCCCCG 1051
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      GAGCTTTGCAGGAAAGGCGTCTTGAATTTCCTAAGCATTTAGGTTGACTCAATTGCATTT 1111
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      TTGTGATGAGGCTCGAGGGCTGCAGCCCCATGCATGATATGCTGGAGTTATATCGTTATG 1171
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      GTTTATGTATCTTGAAGAAGACATGTTTGGTTGGGCCTGAAGCTTGGTCGACAGGGCTTT 1231
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      ACAAATCACCTTCTACTTGTTGCTAGCCATGGAATGTAACATCTTTTGCATGAATCACAC 1291
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      AAATGAGACCTGAGCTGTTTTGCCTGTCAAGCCTTCACCTTCACTGTTCGTCGTTGCGGC 1351
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      GCTCGTCCATCCATCTGAGCGGCTTTGGTCTGATTTGTCTTTGCGTCGGTTTAATTGGTT 1411
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      TGCTACCAATCTTGCTCTCCAAAAGGAGCTTATTATCCTATATGTATTTTTGATTTGATG 1471
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      CTCCTGTTTTTTCTTCTCTCTGAACTGAGCATAGGGGTCAAATATAGGCAAATTTGATGT 1531
consensus_12356#1      ------------------------------------------------------------
                                                                                   

consensus_12356#0      TCTAAAAAAAAAAAA 1546
consensus_12356#1      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)