These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12401#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1776 fasta sequence [ACGACGCAGCAGCAGCGAGAAACGAACGTCGAAGAAGAAGAAGACGAGGGGGAAAAACCGCGGAAAACCACGCGCCGCTGGGCGCGCGCTGGGCTGGGCCCCTCGCGCGCGACGCGACACGACACGACACGACACGACGGCACGAGCCCACCCCGTCTCCCTCCCGTCTCCCTCCCTTTTCCTCTCCCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACATGCCACTCCGCCTCGCCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC-TGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACA--GGGGAAA-CAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCAAAAAAAAAAAGGCCTGATGTAAATATTTCACCAGTATCGAAGAGTAGTAGCAATGAAGAGACCCCCAAAAAGATACTATAAAAGA] [+] EMBL CB640138 [ACGACGCAGCAGCAGCGAGAAACGAACGTCGAAGAAGAAGAAGACGAGGGGGAAAAACCGCGGAAAACCACGCGCCGCTGGGCGCGCGCTGGGCTGGGCCCCTCGCGCGCGACGCGACACGACACGACACGACACGACGGCACGAGCCCACCCCGTCTCCCTCCCGTCTCCCTCCCTTTTCCTCTCCCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACATGCCACTCCGCCTCGCCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAA GAGGAGGC ] [+] EMBL AK107217 [ CCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACATGCCACTCCGCCTCGCCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC TGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACA GGGGAAA CAGACACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGC ] [+] EMBL CB671333 [ ACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTG ] [+] EMBL CB656543 [ AGCCACTTCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC TGTGAAAATTGCTG ] [+] EMBL AY224453 [ GGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGGAGCGYAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTG CAAGACAAGAACTTGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACAAGGGGGAAACCAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAG ] [-] EMBL CB656544 [ GAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC TGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACA GGGGAAA CAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCAAAAAAAAAAAGG ] [-] EMBL CB658744 [ AGTGATATGACA GGGGAAA CAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCATGTTTGATGTTCCCTGATGTAAATATTTCACCAGTATCGAAGAGTAGTAGCAATGAAGAGACCCCCAAAAAGATACTATAAAAGA] [+] EMBL BU099185 [ TTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACANGGATGCCTTTCATGCTTCAGGC ] [+] EMBL CA998064 [ GATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCAAAAAAAAA ] consensusID : consensus_12401#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1707 fasta sequence [TGCGCTCTCACATGGAGTCGTCGTCGTCTCCCCAAACACGACGACCTCGAACCGCCTCCGTCCCCGCCTCGCCAACCCGTCCCCTTCCCCTGTAGCCACCGCGACCACCACCACCACCACGCCGCGGCATCCACAACGCCACCAGAGTACAGAGACGTTCCACCCACCCCGGGCCACCGAACCCAACCCCCCCAGCTCGCTCGATCGATCGCTAGCTCCGACGACAGGTTTGAGCGCGATGAGGCATCCCGGCGCGGGCGGCGGGAGCGGGGACGCCGGGTTCGTCCGGGCGGACCAGATCGACCTCAAGAGCCTCGACGAGCAGCTGGAGCGCCACCTCGGCCGCCCCGCGGAGCGGGCCGCGTCGCAGCACGGGGGCAGCGGGAGCCGCCGCGGCGAGTCCGCCAGGCTCGGGCTCGGGGAGGAGCCGCCGCAGGCGCCGCACCATCAGCGGCGCCGGGAGGACTGGGAGATCGACCCCGCCAAGCTCGTCATCAGAGGCGTCATCGCCCGCGGCACGTTCGGCACCGTCCACCGCGGCGTCTACGGCGGCCAGGACGTCGCTGTCAAAATGCTTGACTGGGGGGAGGATGGCCATAGATCAGAACGAGAAATTTCTTCACTAAGAGCAGCATTTGCACAAGAGGTCGCTGTCTGGCATAAGCTTGATCATCCAAATGTTACCAAGTTTATTGGGGCTATAATGGGTGCAAGAGATTTAAATATACAGACAGAACATGGACATTTTGGCATGCCAAGTAATATTTGCTGCGTTGTTGTCGAGTACCTTGCCGGAGGTGCACTGAAAAATTTTCTGATAAAGAACAGGAGAAGGAAGCTAGCCTATAAAGTTGTGGTCCAATTGGCTCTTGACCTTGCTAGGGGATTAAGCTATCTTCACTCAAAGAAGATAGTTCATCGTGATGTGAAGACTGAAAATATGCTCCTTGACAAATCAAGAACAGTGAAAATCGCTGATTTTGGTGTTGCACGAATTGAGGCTTCAAATCCTAGTGATATGACGGGTGAAACAGGCACACTTGGTTACATGGCACCCGAGGTTCTCAACGGCCATCCTTACAACAGGAAGTGTGATGTATATCGCTTTGGAATCTGCCTATGGGAGATATACTGCTGCGATATGCCGTATCCTGATCTGAGTTTCTCAGAGGTCACTTCAGCTGTTGTTCGTCAGAACTTGAGGCCTGAGATACCGCGCTGCTGCCCTAGCTCCTTGGCCAACGTGATGAAGCGCTGCTGGGACGCGAACCCGGACAAGCGGCCGGCGATGGCGGAGGTGGTGTCCATGCTGGAGGCGATCGACACGTCCAAGGGCGGTGGCATGATCCCGACCGACCAGCCACAGGGATGCTTCTCGTGCTTCGGTCGGCACCGAGGCCCCTGACGAACTTGATCTGATGGCGTCACTGATAATTTGTTATCGCTATATCTCAGTGTAATCTAATCGCATTCGCTATGGCTAATTTGAGGAGCTGTGTGATTGATGTAAATGCCTTAACGGTCCAGCACCTCAGCTTCATCGTCGTATGATCGCTGCGAATCCTAATGCTTGGCCTATGATAAGATCGAGCTTAGAAGAGATTATTGTGACAGAGCTGCCGACGAAGTTTACAATCTCATCATATATGGTCATGAAGTAGACCCACTGTACTATTGCAGTGTAATCGACATCTTTGCAGAATGTTA] [+] EMBL AK108130 [TGCGCTCTCACATGGAGTCGTCGTCGTCTCCCCAAACACGACGACCTCGAACCGCCTCCGTCCCCGCCTCGCCAACCCGTCCCCTTCCCCTGTAGCCACCGCGACCACCACCACCACCACGCCGCGGCATCCACAACGCCACCAGAGTACAGAGACGTTCCACCCACCCCGGGCCACCGAACCCAACCCCCCCAGCTCGCTCGATCGATCGCTAGCTCCGACGACAGGTTTGAGCGCGATGAGGCATCCCGGCGCGGGCGGCGGGAGCGGGGACGCCGGGTTCGTCCGGGCGGACCAGATCGACCTCAAGAGCCTCGACGAGCAGCTGGAGCGCCACCTCGGCCGCCCCGCGGAGCGGGCCGCGTCGCAGCACGGGGGCAGCGGGAGCCGCCGCGGCGAGTCCGCCAGGCTCGGGCTCGGGGAGGAGCCGCCGCAGGCGCCGCACCATCAGCGGCGCCGGGAGGACTGGGAGATCGACCCCGCCAAGCTCGTCATCAGAGGCGTCATCGCCCGCGGCACGTTCGGCACCGTCCACCGCGGCGTCTACGGCGGCCAGGACGTCGCTGTCAAAATGCTTGACTGGGGGGAGGATGGCCATAGATCAGAACGAGAAATTTCTTCACTAAGAGCAGCATTTGCACAAGAGGTCGCTGTCTGGCATAAGCTTGATCATCCAAATGTTACCAAGTTTATTGGGGCTATAATGGGTGCAAGAGATTTAAATATACAGACAGAACATGGACATTTTGGCATGCCAAGTAATATTTGCTGCGTTGTTGTCGAGTACCTTGCCGGAGGTGCACTGAAAAATTTTCTGATAAAGAACAGGAGAAGGAAGCTAGCCTATAAAGTTGTGGTCCAATTGGCTCTTGACCTTGCTAGGGGATTAAGCTATCTTCACTCAAAGAAGATAGTTCATCGTGATGTGAAGACTGAAAATATGCTCCTTGACAAATCAAGAACAGTGAAAATCGCTGATTTTGGTGTTGCACGAATTGAGGCTTCAAATCCTAGTGATATGACGGGTGAAACAGGCACACTTGGTTACATGGCACCCGAGGTTCTCAACGGCCATCCTTACAACAGGAAGTGTGATGTATATCGCTTTGGAATCTGCCTATGGGAGATATACTGCTGCGATATGCCGTATCCTGATCTGAGTTTCTCAGAGGTCACTTCAGCTGTTGTTCGTCAGAACTTGAGGCCTGAGATACCGCGCTGCTGCCCTAGCTCCTTGGCCAACGTGATGAAGCGCTGCTGGGACGCGAACCCGGACAAGCGGCCGGCGATGGCGGAGGTGGTGTCCATGCTGGAGGCGATCGACACGTCCAAGGGCGGTGGCATGATCCCGACCGACCAGCCACAGGGATGCTTCTCGTGCTTCGGTCGGCACCGAGGCCCCTGACGAACTTGATCTGATGGCGTCACTGATAATTTGTTATCGCTATATCTCAGTGTAATCTAATCGCATTCGCTATGGCTAATTTGAGGAGCTGTGTGATTGATGTAAATGCCTTAACGGTCCAGCACCTCAGCTTCATCGTCGTATGATCGCTGCGAATCCTAATGCTTGGCCTATGATAAGATCGAGCTTAGAAGAGATTATTGTGACAGAGCTGCCGACGAAGTTTACAATCTCATCATATATGGTCATGAAGTAGACCCACTGTACTATTGCAGTGTAATCGACATCTTTGCAGAATGTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12401#0 ACGACGCAGCAGCAGCGAGAAACGAACGTCGAAGAAGAAGAAGACGAGGGGGAAAAACCG 60 consensus_12401#1 ------------------------------------------------------------ consensus_12401#0 CGGAAAACCACGCGCCGCTGGGCGCGCGCTGGGCTGGGCCCCTCGCGCGCGACGCGACAC 120 consensus_12401#1 ----------------------TGCGCTCTCACATGGAGTCGTCGT-CGTCTCCCCAAAC 37 **** ** *** * *** ** * * * ** consensus_12401#0 GACACGACACGACACGACGGCACGAGCCCACCCCGTCTCCCTCCCGTCTCCCTCCCTTTT 180 consensus_12401#1 ACGACGACCTCGAACCGCCTC-CGTCCCCGCCTCG---CCAACCCGTCCCCTTCCCCTGT 93 ***** ** * * ** *** ** ** ** ****** ** **** * * consensus_12401#0 CCTCTCCCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACA-TGCCACTCCGCCTCG 239 consensus_12401#1 AGCCACCGCGACCACCACC-ACCACCAC-GCCGCGGCATCCACAACGCCACCAGAGTACA 151 * ** ** ** * ** ** * * *** * **** ***** * consensus_12401#0 CCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCT 299 consensus_12401#1 GAGACGTTCCACCCACCCCGGGCCACCGAACCCAACCC--CCCCAGCTCGCTCGATCGAT 209 * *** * ** * ** * ** * ** ** * ********* * * * consensus_12401#0 CACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGC 359 consensus_12401#1 CGCTAGCTCCGACGACAGGTTTGAGCGCGATGAG-GCATCCCGGCGCGGGCGGCGGGAGC 268 * ** **** * * * * * * * ** *** * * ** ** consensus_12401#0 GGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTG 419 consensus_12401#1 GGGGACGCCGGGTTCGTCCGGGCGGACCAGATCGACCTCAAGAGCCTCGACGAGCAGCTG 328 ** ** * ******** ***** *********************** ************ consensus_12401#0 GAGCGCCACCTGAGCCGCGC-GTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGA 478 consensus_12401#1 GAGCGCCACCTCGGCCGCCCCGCGGAGCGGGCCGCGTCGCAGCACGGGGGCAGCGGG-AG 387 *********** ***** * * *** * * * **** ** *** ** * consensus_12401#0 CCAGCGTGGC-AGCAAGCC--GCCCGCGCTCGCCGCCG---CGCACTACTCGCAGAACCG 532 consensus_12401#1 CCGCCGCGGCGAGTCCGCCAGGCTCGGGCTCGGGGAGGAGCCGCCGCAGGCGCCGCACCA 447 ** ** *** ** *** ** ** ***** * * *** * *** * *** consensus_12401#0 CAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCAT 592 consensus_12401#1 TCAGCGGCGCCGGGAGGACTGGGAGATCGACCCCGCCAAGCTCGTCATCAGAGGCGTCAT 507 ** *** ******* *************************** **** ** ***** consensus_12401#0 CGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGT 652 consensus_12401#1 CGCCCGCGGCACGTTCGGCACCGTCCACCGCGGCGTCTACGGCGGCCAGGACGTCGCTGT 567 ************ **************************** ****** ******** ** consensus_12401#0 GAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAG 712 consensus_12401#1 CAAAATGCTTGACTGGGGGGAGGATGGCCATAGATCAGAACGAGAAATTTCTTCACTAAG 627 *** * *********** ******** ***** ** **** *** ** * ******* consensus_12401#0 AGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAA 772 consensus_12401#1 AGCAGCATTTGCACAAGAGGTCGCTGTCTGGCATAAGCTTGATCATCCAAATGTTACCAA 687 ****** *** *********** **************** ** ************** ** consensus_12401#0 GTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCT 832 consensus_12401#1 GTTTATTGGGGCTATAATGGGTGCAAGAGATTTAAATATACAGACAGAACATGGACATTT 747 ****** ************** ** ** *** ** **** ** ****** ****** * consensus_12401#0 TGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAA 892 consensus_12401#1 TGGCATGCCAAGTAATATTTGCTGCGTTGTTGTCGAGTACCTTGCCGGAGGTGCACTGAA 807 ** *************** ***** ******** *********** ** *** **** ** consensus_12401#0 AGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGC 952 consensus_12401#1 AAATTTTCTGATAAAGAACAGGAGAAGGAAGCTAGCCTATAAAGTTGTGGTCCAATTGGC 867 * ************** ******* **** **** * ************ ** * ** consensus_12401#0 TCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGT 1012 consensus_12401#1 TCTTGACCTTGCTAGGGGATTAAGCTATCTTCACTCAAAGAAGATAGTTCATCGTGATGT 927 ************ ***** ***** ******************** ** ** ******** consensus_12401#0 AAAGACTGAAAATATGCTTCTTGACAAGACAAGAACTGTGAAAATTGCTGATTTTGGTGT 1072 consensus_12401#1 GAAGACTGAAAATATGCTCCTTGACAAATCAAGAACAGTGAAAATCGCTGATTTTGGTGT 987 ***************** ******** ******* ******** ************** consensus_12401#0 TGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACAGGGGAAACAGGCACCCTTGGTTA 1132 consensus_12401#1 TGCACGAATTGAGGCTTCAAATCCTAGTGATATGACGGGTGAAACAGGCACACTTGGTTA 1047 *** ** **************** *********** ** *********** ******** consensus_12401#0 CATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTT 1192 consensus_12401#1 CATGGCACCCGAGGTTCTCAACGGCCATCCTTACAACAGGAAGTGTGATGTATATCGCTT 1107 ****** ** *************** *** *********** ** ***** *** **** consensus_12401#0 TGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTC 1252 consensus_12401#1 TGGAATCTGCCTATGGGAGATATACTGCTGCGATATGCCGTATCCTGATCTGAGTTTCTC 1167 *** ** ** ******************* ******** ***** *** **** ***** consensus_12401#0 AGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCC 1312 consensus_12401#1 AGAGGTCACTTCAGCTGTTGTTCGTCAGAACTTGAGGCCTGAGATACCGCGCTGCTGCCC 1227 ********* ** ***************** ** *********** ** ******** ** consensus_12401#0 AAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGA 1372 consensus_12401#1 TAGCTCCTTGGCCAACGTGATGAAGCGCTGCTGGGACGCGAACCCGGACAAGCGGCCGGC 1287 ** ** **** *********** *********** ******** ******** ** * consensus_12401#0 GATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGAT 1432 consensus_12401#1 GATGGCGGAGGTGGTGTCCATGCTGGAGGCGATCGACACGTCCAAGGGCGGTGGCATGAT 1347 ****** *********** *** ************* ** ** ***** ** ******** consensus_12401#0 CCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACG 1492 consensus_12401#1 CCCGACCGACCAGCCACAGGGATGCTTCTCGTGCTTCGGTCGGCACCGAGGCCCCTGACG 1407 *** ** **** *** ****** * ** ****** * * * ** * ** ** ***** consensus_12401#0 GATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTC-GTGTAATTCGATT 1551 consensus_12401#1 AACTTGATCTGATGGCGTCACTGATAATTTGTTATCGCTATATCTCAGTGTAATCTAATC 1467 * * *** ** * * * **** ***** ******* ** consensus_12401#0 ACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTG 1611 consensus_12401#1 GCATTCGCTATGGCTAATTTGAGGAGCTGTGTGATTGATGTAA-ATGCCTTAACGGTCCA 1526 **** * * * * * ** * ** ** ** ** **** * * * consensus_12401#0 GTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGA--AGA 1669 consensus_12401#1 GCACCTCAGCTTCATCGTCGTATGATCGCTGCGAATCCTAATGCTTGGCCTATGATAAGA 1586 * * * * *** ** *** **** ** * **** *** consensus_12401#0 ACCAGCTCGGCTCG--TTCATCCAAAAAAAAAAAGGCCTGATGTAAATATTTCACCA-GT 1726 consensus_12401#1 TCGAGCTTAGAAGAGATTATTGTGACAGAGCTGCCGACGAAGTTTACAATCTCATCATAT 1646 * **** * ** * * * * * * * * * ** *** ** * consensus_12401#0 ATCGAAGAGTAGTAG---CAATGAAGAGACCCCCAAAAA--GATACTATAAAAGA----- 1776 consensus_12401#1 ATGGTCATGAAGTAGACCCACTGTACTATTGCAGTGTAATCGACATCTTTGCAGAATGTT 1706 ** * * ***** ** ** * * ** ** * * *** consensus_12401#0 - consensus_12401#1 A 1707 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||