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Oryza sativa
cluster # 12431 cluster # 12431       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12431#0 length = 2752 sequences # 1  
consensus_12431#1 length = 1674 sequences # 7  
consensus_12431#2 length = 735 sequences # 2  

consensusID : consensus_12431#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2752
fasta sequence
                              [TCCCTCCCTCATGCACGCTGACGCTGCAATGCTCCTCCTCTGCGGCGGCTAGATCATTCATTCCAACAATTAAATTAACAATAATTGAATTGAAGGACATTAATTAGTTTGATCGATGGCGGGTGCAAACGCGTCGACGGTGAAGCCGGTGGTGGCGGCGTGCTACGACAACAACCTGGTGAACTCGCAGGGGATGTTCCTGGGCGACGAGCCGCTGCGCTTCGCCCTCCCGCTCCTCCTGGTGCAGGTCTCCATCATCCTCATCCTCTCCGCCGCCGCCCACCACGTCCTCCGCCGCCTCGGCCAGTGCCGCTTCGTGACCCACATGCTCGTCGGCATCTTCCTCGGCCCCTCCGTCCTCGGCCGCAACCCTCACCTCCGCACCGCCCTCTTCTCCGAGCGCGGCACCTACATCCTCGAGAGCGTCTCCCTCGTCGCCCTCATCCTCTTCCTCTTCTCCATGGCCGTCAAGACCGACCTCACCCTCCTCCGCCGCCCCACCGCCCGAGCCCTCGCCGTCGGCCTCGCCGGCTCCCTCGTCCCCCTCGCCGTCACCCTCCCCGTCTTCCACGCCCTCAGCCCCTCCCTCCCCGCCGACCTCCGCGGCTCCTCCCTCATCACCGAGCTCGCCGTCCGCCTCTCCCTCTCCTCCTTCCCCGTCGTCGCCGACGCCCTCGCCGAGCTCGACCTCCTCAACTCCGAGCTCGGCCGCGTCGCCCTCAACGCCTCCCTCATCACCGACGTCACCTCCTGGTTCCTCCGCGCCTGCTTCGCCGCCGCCTTCCTCATCACCCAGGCTAAGTCCCCGCTCTTCACCGCCAAGGTCCTCGCCTCCTTCGCCGCCTTCGTCCTCTTCGTCTTCTTCGTCGCCCGCCCCGCCGGCCGCTACATCGCCCGCAAGCGCACCCCGCCCGGGGACCTCCTCTCCGAGGGCTCCTTCGTCCTCGTCGTCATCGCCGCGCTGCTCTCCGCGCTCGTCACCGACGTCATCGGCTTCAAGTTTATGATCGGCCCCATGATGCTGGGCCTCGCGCTCCCCGGCGGCATGCCCATCGGCGCCACCCTCACGGAGCGCCTCGACTCCTTCTTCATCGCGCTCTTCCTCCCGGTCTACATGGCGCTCGCCGGCTACCGCACCGACCTGGCGGAGCTGAGCCTGATAGGCGTCAGCGCGGAGCACGAGGAGAAGTTCTGCGCGCTGGAGCTGTTCGTGGCGCTGTGCGTGGCCGGCAAGATGGTGGGGTGCGTCGCGGCGGGGCTCTTCTTCTCCATGCCGTTCCGGGAGGCCACCGTGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGGAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGCTGACGCTGTCGATGGTGGTCATCACGGCGGTGGCGACGCCGCTGATCAAGCTGCTGTACGACCCGTCGGGGAGGTTCGCGCGGGCGAAGCGGCGGACCATGGAGGAGTCGCGGCCCAACGCGGAGCTGCGGGTGATGGCCTGCCTCTTCAGCGAGGACCACGCGGCGCCGCTGCTGGACCTGATCGAGGCGTCGGGGTCGTCGCGCGACGCCCCCGTGTCGCTGATCGTGCTCCACCTGACGGAGCTGGTGGGGCACGCGGCGTCCGTGCTGAAGCCGCACAGGAAGTCCCGGAGCAGCTGCGGCAACCCGACGCCGTCGGACCGCATCGTGAACGCGTTCCGCTACTTCGAGCAGCAGGCGCCGCTGGGGGCGGTGACGGTGAGCCCGTACGTGGTGGCGTCGCCGTACAGCAGCATGCAGCACGACGTGTGCCTCCTGGCGCACAGCCGCAAGGCCAACCTCATCCTGCTCCCCTTCCACAAGTCCTCGGACGGCGCCCGGAGCACCGCCAACAACGCCATCCGCGGCATCAACCGGTCGGTGATGCAGTACGCGCCGTGCTCGGTGGGCATCCTGATCGACCACGGGGTGGCGGCGGGGTCGGCGTGCGCCACGGCGTCCAACAGCACGCTGCAGCGGGTGGCGCTCTACTTCCTGGGCGGCGCCGACGACCGGGAGGCGCTGGCGTACGTGGCGCGGATGGCGGAGTGCGGTTTGGTGGCGGTGACGGTGGTGCGGCTGAAGCTGCGGGACTGGGTGGGGATGGGGGGCCGCGACGAGATGAGGGACGAGGAGGCGCTGCAGGAGTTCTGGCAGAGGTACAGCTGCGCGGGCGCGGAGAGGGTGGCGTACGTGGAGAAGACGGTGGAGGACGGGGAGGGGACGGCGTCGGTGGTGCGCGCCATGAGCGACAAGTTCGACCTGCTGGTGGTTGGTAGGAGAGAGGGCGGCGGCGACGGCGCGGAGGGGTCGTCGGCGGCGGCGCTGACGAGCGGGCTGTCGGAGTGGAGCGAGTTCCCGGAGCTGGGAGTGCTGGGCGACATGCTTGCCTCCGCCGACTTCGCGGCCAAGGTCTCTATCCTCGTCGTCCAGCAGCAGGCCGCCACCAGGAACGACGCCGATTACTGACTTAATTGGCTAGTCATGCTGATATACTACCACATTCCCTCTGCTCTTCTCTTCTCTGCTCTGCTGCAATATTAGTGTTCTTCTCCAAGTAATCTTGTGTTTTAGGATTTTTGGCGAGCTTCTGTATTTTACTGTACCTAGGATTGCATAATCTTGCTTTGATTCTGGACACAGTCTAGATTTCTATCGCTAGGAATATGTACAAGTATGCATATGATATTGACATATATC]

[+] EMBL AK100300             [TCCCTCCCTCATGCACGCTGACGCTGCAATGCTCCTCCTCTGCGGCGGCTAGATCATTCATTCCAACAATTAAATTAACAATAATTGAATTGAAGGACATTAATTAGTTTGATCGATGGCGGGTGCAAACGCGTCGACGGTGAAGCCGGTGGTGGCGGCGTGCTACGACAACAACCTGGTGAACTCGCAGGGGATGTTCCTGGGCGACGAGCCGCTGCGCTTCGCCCTCCCGCTCCTCCTGGTGCAGGTCTCCATCATCCTCATCCTCTCCGCCGCCGCCCACCACGTCCTCCGCCGCCTCGGCCAGTGCCGCTTCGTGACCCACATGCTCGTCGGCATCTTCCTCGGCCCCTCCGTCCTCGGCCGCAACCCTCACCTCCGCACCGCCCTCTTCTCCGAGCGCGGCACCTACATCCTCGAGAGCGTCTCCCTCGTCGCCCTCATCCTCTTCCTCTTCTCCATGGCCGTCAAGACCGACCTCACCCTCCTCCGCCGCCCCACCGCCCGAGCCCTCGCCGTCGGCCTCGCCGGCTCCCTCGTCCCCCTCGCCGTCACCCTCCCCGTCTTCCACGCCCTCAGCCCCTCCCTCCCCGCCGACCTCCGCGGCTCCTCCCTCATCACCGAGCTCGCCGTCCGCCTCTCCCTCTCCTCCTTCCCCGTCGTCGCCGACGCCCTCGCCGAGCTCGACCTCCTCAACTCCGAGCTCGGCCGCGTCGCCCTCAACGCCTCCCTCATCACCGACGTCACCTCCTGGTTCCTCCGCGCCTGCTTCGCCGCCGCCTTCCTCATCACCCAGGCTAAGTCCCCGCTCTTCACCGCCAAGGTCCTCGCCTCCTTCGCCGCCTTCGTCCTCTTCGTCTTCTTCGTCGCCCGCCCCGCCGGCCGCTACATCGCCCGCAAGCGCACCCCGCCCGGGGACCTCCTCTCCGAGGGCTCCTTCGTCCTCGTCGTCATCGCCGCGCTGCTCTCCGCGCTCGTCACCGACGTCATCGGCTTCAAGTTTATGATCGGCCCCATGATGCTGGGCCTCGCGCTCCCCGGCGGCATGCCCATCGGCGCCACCCTCACGGAGCGCCTCGACTCCTTCTTCATCGCGCTCTTCCTCCCGGTCTACATGGCGCTCGCCGGCTACCGCACCGACCTGGCGGAGCTGAGCCTGATAGGCGTCAGCGCGGAGCACGAGGAGAAGTTCTGCGCGCTGGAGCTGTTCGTGGCGCTGTGCGTGGCCGGCAAGATGGTGGGGTGCGTCGCGGCGGGGCTCTTCTTCTCCATGCCGTTCCGGGAGGCCACCGTGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGGAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGCTGACGCTGTCGATGGTGGTCATCACGGCGGTGGCGACGCCGCTGATCAAGCTGCTGTACGACCCGTCGGGGAGGTTCGCGCGGGCGAAGCGGCGGACCATGGAGGAGTCGCGGCCCAACGCGGAGCTGCGGGTGATGGCCTGCCTCTTCAGCGAGGACCACGCGGCGCCGCTGCTGGACCTGATCGAGGCGTCGGGGTCGTCGCGCGACGCCCCCGTGTCGCTGATCGTGCTCCACCTGACGGAGCTGGTGGGGCACGCGGCGTCCGTGCTGAAGCCGCACAGGAAGTCCCGGAGCAGCTGCGGCAACCCGACGCCGTCGGACCGCATCGTGAACGCGTTCCGCTACTTCGAGCAGCAGGCGCCGCTGGGGGCGGTGACGGTGAGCCCGTACGTGGTGGCGTCGCCGTACAGCAGCATGCAGCACGACGTGTGCCTCCTGGCGCACAGCCGCAAGGCCAACCTCATCCTGCTCCCCTTCCACAAGTCCTCGGACGGCGCCCGGAGCACCGCCAACAACGCCATCCGCGGCATCAACCGGTCGGTGATGCAGTACGCGCCGTGCTCGGTGGGCATCCTGATCGACCACGGGGTGGCGGCGGGGTCGGCGTGCGCCACGGCGTCCAACAGCACGCTGCAGCGGGTGGCGCTCTACTTCCTGGGCGGCGCCGACGACCGGGAGGCGCTGGCGTACGTGGCGCGGATGGCGGAGTGCGGTTTGGTGGCGGTGACGGTGGTGCGGCTGAAGCTGCGGGACTGGGTGGGGATGGGGGGCCGCGACGAGATGAGGGACGAGGAGGCGCTGCAGGAGTTCTGGCAGAGGTACAGCTGCGCGGGCGCGGAGAGGGTGGCGTACGTGGAGAAGACGGTGGAGGACGGGGAGGGGACGGCGTCGGTGGTGCGCGCCATGAGCGACAAGTTCGACCTGCTGGTGGTTGGTAGGAGAGAGGGCGGCGGCGACGGCGCGGAGGGGTCGTCGGCGGCGGCGCTGACGAGCGGGCTGTCGGAGTGGAGCGAGTTCCCGGAGCTGGGAGTGCTGGGCGACATGCTTGCCTCCGCCGACTTCGCGGCCAAGGTCTCTATCCTCGTCGTCCAGCAGCAGGCCGCCACCAGGAACGACGCCGATTACTGACTTAATTGGCTAGTCATGCTGATATACTACCACATTCCCTCTGCTCTTCTCTTCTCTGCTCTGCTGCAATATTAGTGTTCTTCTCCAAGTAATCTTGTGTTTTAGGATTTTTGGCGAGCTTCTGTATTTTACTGTACCTAGGATTGCATAATCTTGCTTTGATTCTGGACACAGTCTAGATTTCTATCGCTAGGAATATGTACAAGTATGCATATGATATTGACATATATC]


>consensus_12431#0 TCCCTCCCTCATGCACGCTGACGCTGCAATGCTCCTCCTCTGCGGCGGCTAGATCATTCA TTCCAACAATTAAATTAACAATAATTGAATTGAAGGACATTAATTAGTTTGATCGATGGC GGGTGCAAACGCGTCGACGGTGAAGCCGGTGGTGGCGGCGTGCTACGACAACAACCTGGT GAACTCGCAGGGGATGTTCCTGGGCGACGAGCCGCTGCGCTTCGCCCTCCCGCTCCTCCT GGTGCAGGTCTCCATCATCCTCATCCTCTCCGCCGCCGCCCACCACGTCCTCCGCCGCCT CGGCCAGTGCCGCTTCGTGACCCACATGCTCGTCGGCATCTTCCTCGGCCCCTCCGTCCT CGGCCGCAACCCTCACCTCCGCACCGCCCTCTTCTCCGAGCGCGGCACCTACATCCTCGA GAGCGTCTCCCTCGTCGCCCTCATCCTCTTCCTCTTCTCCATGGCCGTCAAGACCGACCT CACCCTCCTCCGCCGCCCCACCGCCCGAGCCCTCGCCGTCGGCCTCGCCGGCTCCCTCGT CCCCCTCGCCGTCACCCTCCCCGTCTTCCACGCCCTCAGCCCCTCCCTCCCCGCCGACCT CCGCGGCTCCTCCCTCATCACCGAGCTCGCCGTCCGCCTCTCCCTCTCCTCCTTCCCCGT CGTCGCCGACGCCCTCGCCGAGCTCGACCTCCTCAACTCCGAGCTCGGCCGCGTCGCCCT CAACGCCTCCCTCATCACCGACGTCACCTCCTGGTTCCTCCGCGCCTGCTTCGCCGCCGC CTTCCTCATCACCCAGGCTAAGTCCCCGCTCTTCACCGCCAAGGTCCTCGCCTCCTTCGC CGCCTTCGTCCTCTTCGTCTTCTTCGTCGCCCGCCCCGCCGGCCGCTACATCGCCCGCAA GCGCACCCCGCCCGGGGACCTCCTCTCCGAGGGCTCCTTCGTCCTCGTCGTCATCGCCGC GCTGCTCTCCGCGCTCGTCACCGACGTCATCGGCTTCAAGTTTATGATCGGCCCCATGAT GCTGGGCCTCGCGCTCCCCGGCGGCATGCCCATCGGCGCCACCCTCACGGAGCGCCTCGA CTCCTTCTTCATCGCGCTCTTCCTCCCGGTCTACATGGCGCTCGCCGGCTACCGCACCGA CCTGGCGGAGCTGAGCCTGATAGGCGTCAGCGCGGAGCACGAGGAGAAGTTCTGCGCGCT GGAGCTGTTCGTGGCGCTGTGCGTGGCCGGCAAGATGGTGGGGTGCGTCGCGGCGGGGCT CTTCTTCTCCATGCCGTTCCGGGAGGCCACCGTGCTGGCGCTGATGCTCAACATCCGGGG CATCGTGGAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCA CTACTCGACGCTGACGCTGTCGATGGTGGTCATCACGGCGGTGGCGACGCCGCTGATCAA GCTGCTGTACGACCCGTCGGGGAGGTTCGCGCGGGCGAAGCGGCGGACCATGGAGGAGTC GCGGCCCAACGCGGAGCTGCGGGTGATGGCCTGCCTCTTCAGCGAGGACCACGCGGCGCC GCTGCTGGACCTGATCGAGGCGTCGGGGTCGTCGCGCGACGCCCCCGTGTCGCTGATCGT GCTCCACCTGACGGAGCTGGTGGGGCACGCGGCGTCCGTGCTGAAGCCGCACAGGAAGTC CCGGAGCAGCTGCGGCAACCCGACGCCGTCGGACCGCATCGTGAACGCGTTCCGCTACTT CGAGCAGCAGGCGCCGCTGGGGGCGGTGACGGTGAGCCCGTACGTGGTGGCGTCGCCGTA CAGCAGCATGCAGCACGACGTGTGCCTCCTGGCGCACAGCCGCAAGGCCAACCTCATCCT GCTCCCCTTCCACAAGTCCTCGGACGGCGCCCGGAGCACCGCCAACAACGCCATCCGCGG CATCAACCGGTCGGTGATGCAGTACGCGCCGTGCTCGGTGGGCATCCTGATCGACCACGG GGTGGCGGCGGGGTCGGCGTGCGCCACGGCGTCCAACAGCACGCTGCAGCGGGTGGCGCT CTACTTCCTGGGCGGCGCCGACGACCGGGAGGCGCTGGCGTACGTGGCGCGGATGGCGGA GTGCGGTTTGGTGGCGGTGACGGTGGTGCGGCTGAAGCTGCGGGACTGGGTGGGGATGGG GGGCCGCGACGAGATGAGGGACGAGGAGGCGCTGCAGGAGTTCTGGCAGAGGTACAGCTG CGCGGGCGCGGAGAGGGTGGCGTACGTGGAGAAGACGGTGGAGGACGGGGAGGGGACGGC GTCGGTGGTGCGCGCCATGAGCGACAAGTTCGACCTGCTGGTGGTTGGTAGGAGAGAGGG CGGCGGCGACGGCGCGGAGGGGTCGTCGGCGGCGGCGCTGACGAGCGGGCTGTCGGAGTG GAGCGAGTTCCCGGAGCTGGGAGTGCTGGGCGACATGCTTGCCTCCGCCGACTTCGCGGC CAAGGTCTCTATCCTCGTCGTCCAGCAGCAGGCCGCCACCAGGAACGACGCCGATTACTG ACTTAATTGGCTAGTCATGCTGATATACTACCACATTCCCTCTGCTCTTCTCTTCTCTGC TCTGCTGCAATATTAGTGTTCTTCTCCAAGTAATCTTGTGTTTTAGGATTTTTGGCGAGC TTCTGTATTTTACTGTACCTAGGATTGCATAATCTTGCTTTGATTCTGGACACAGTCTAG ATTTCTATCGCTAGGAATATGTACAAGTATGCATATGATATTGACATATATC



consensusID : consensus_12431#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1674
fasta sequence
                              [GTCATCGAATTACAAAATCGTTCCCCTACCGTAAAACCGGATACAACGCGTCCCCCAACTTATAAAACCGGTGTAAACTAGATCCTACGGCGATTTTGACTCCGATTTTATCCGACGTGGCAGCTGACTCAGCGTGGGTCCCACATGTCAGCCCCTTCTTTCCCTCCCCTCTCTTCCTCTCTCTCCTCTTCTTTTCTCTCCCTTTCCTCCTCAGTTCGGCAGTGGGCAGGGCAGCCGCCCGGTAGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGCCGACGTCCTCGCCGAGCTCGACCTCCTCAATTCCGAGCTTGGCCGCATCGCCCTCAACGCCTCACTCATCACCGAGGCGCTGGAGTTGTTCGTGGTGTTGTGCGTCGCCGGCAAGATGGTGGGGTCGCCGCGGGGCTCTTCGAGGAACCCGTCCCGGATCCCGCCCCCACCTCCCGCCACGGTAGGCACCACAGCTCGAGCTTGAACCCGCCACTCCCGAAGCCCTCAAATCCGATCACGCCTCCATCGCCGCGACACGCGGCGGCTGCGGCTGCAGCGACGACCGTGGCAAATGGCAGCGAAGCGGTGGACGACACCGGCGAGTGGACCGACCAAGAGATGGACATCACCCGCCGCCGCCGCGCACGCCTGAGAGCGTCATCCGCGCGGCGAAGTTCGGCAGCAGGGGCGCTGCTATTGCGGGCCGCACGCCGCACCGCCGGTCGGCCGTCGGACCTCCTCGTCCCGGCAGCCTCCTCCCCGCCGCCGGCCAGCCTGCCCAGGGAGATGAGTGAGAGAGAGAGGAGGAAGGGAGAGGAGGGGAAAGAGAGAGCATGATGACGTGGCGTCCTGACATGTGGGGCCACGTAGGTCTCATGATGACTCACCCGCTACGTAGGATAAAAC-CGGGGTTAAAACCATTAAAGGATGTAAAGCGAACGGTTTTGTAAGTTAAGTGATGTTATATATCTGGTTTTA-CGGTTGGGGGATG-ATTTTGTAATTTGTCGTCCAAAAAAAAGGATACAATCTCGAGG]

[-] EMBL AK068332             [GTCATCGAATTACAAAATCGTTCCCCTACCGTAAAACCGGATACAACGCGTCCCCCAACTTATAAAACCGGTGTAAACTAGATCCTACGGCGATTTTGACTCCGATTTTATCCGACGTGGCAGCTGACTCAGCGTGGGTCCCACATGTCAGCCCCTTCTTTCCCTCCCCTCTCTTCCTCTCTCTCCTCTTCTTTTCTCTCCCTTTCCTCCTCAGTTCGGCAGTGGGCAGGGCAGCCGCCCGGTAGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGCCGACGTCCTCGCCGAGCTCGACCTCCTCAATTCCGAGCTTGGCCGCATCGCCCTCAACGCCTCACTCATCACCGAGGCGCTGGAGTTGTTCGTGGTGTTGTGCGTCGCCGGCAAGATGGTGGGGTCGCCGCGGGGCTCTTCGAGGAACCCGTCCCGGATCCCGCCCCCACCTCCCGCCACGGTAGGCACCACAGCTCGAGCTTGAACCCGCCACTCCCGAAGCCCTCAAATCCGATCACGCCTCCATCGCCGCGACACGCGGCGGCTGCGGCTGCAGCGACGACCGTGGCAAATGGCAGCGAAGCGGTGGACGACACCGGCGAGTGGACCGACCAAGAGATGGACATCACCCGCCGCCGCCGCGCACGCCTGAGAGCGTCATCCGCGCGGCGAAGTTCGGCAGCAGGGGCGCTGCTATTGCGGGCCGCACGCCGCACCGCCGGTCGGCCGTCGGACCTCCTCGTCCCGGCAGCCTCCTCCCCGCCGCCGGCCAGCCTGCCCAGGGAGATGAGTGAGAGAG                                                                                                                                                                                                                                              ]
[+] EMBL AK108076             [                                                                                                                                                                                                    TCTCCCTTTCCTCCTCAGTTCGGCAGTGGGCAGGGCAGCCGCCCGGTAGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACCACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGCCGACGTCCTCGCCGAGCTCGACCTCCTCAATTCCGAGCTTGGCCGCATCGCCCTCAACGCCTCACTCATCACCGAGGCGCTGGAGTTGTTCGTGGTGTTGTGCGTCGCCGGCAAGATGGTGGGGTCGCCGCGGGGCTCTTCGAGGAACCCGTCCCGGATCCCGCCCCCACCTCCCGCCACGGTAGGCACCACAGCTCGAGCTTGAACCCGCCACTCCCGAAGCCCTCAAATCCGATCACGCCTCCATCGCCGCGACACGCGGCGGCTGCGGCTGCAGCGACGACCGTGGCAAATGGCAGCGAAGCGGTGGACGACACCGGCGAGTGGACCGACCAAGAGATGGACATCACCCGCCGCCGCCGCGCACGCCTGAGAGCGTCATCCGCGCGGCGAAGTTCGGCAGCAGGGGCGCTGCTATTGCGGGCCGCACGCCGCACCGCCGGTCGGCCGTCGGACCTCCTCGTCCCGGCAGCCTCCTCCCCGCCGCCGGCCAGCCTGCCCAGGGAGATGAGTGAGAGAGAGAGGAGGAAGGGAGAGGAGGGGAAAGAGAGAGCATGATGACGTGGCGTCCTGACATGTGGGGCCACGTAGGTCTCATGATGACTCACCCGCTACGTAGGATAAAAC CGGGGTTAAAACCATTAAAGGATGTAAAGCGAACGGTTTTGTAAGTTAAGTGATGTTATATATCTGGTTTTA CGGTTGGGGGATG ATTTTGTA                                   ]
[+] EMBL CB652429             [                                                                                                                                                                                                                                       CAGCCGCCCTGAAGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGCCGACGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB643211             [                                                                                                                                                                                                                                          CCGCCCCGTAGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGGCGGCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGCCGACGTCCTCGCCGAGCTCGACCTCCTCAATTCCGAGCTTGGCCGCATCGCCCTCAACGCCTCACTCATCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB667607             [                                                                                                                                                                                                                                                   AGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGCCGACGTCCTCGCCGAGCTCGACCTCCTCAATTCCGAGCTTGGCCGCATCGCCCTCAACGCCTCACTCATCACCGAGGCGCTGGAGTTGTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB667609             [                                                                                                                                                                                                                                                   AGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCGGGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCAGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTGATCCAGGAGTCGGGCTCATCTCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB643212             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGGTGTTGTGCGTCGCCGGCAAGATGGTGGGGTCGCCGCGGGGCTCTTTGAGGAACCCGTCCCGGATACCGCCCCCACCTCCCGCCACGGTAGGCACCACAGCTCGAGCTTGAACCCGCCACTCCCGAAGCCCTCAAATCCGATCACGCTTCCATCGCCGCGACACGCGGCGGCTGCGGCTGCAGCGTCGTCCGTGGCAAATGGCAGCGAAGCGGTGGACGACACCGGCGAGTGGACCGACCAAGAGATGGACATCACCCGCCGCCGCCGCGCACGCTTGAGAGCGTCATCCGCGCGGCGAAGTTCGGCAGCAGGGGCGTTGCTATTGCGGGCCGCACGCCGCTCCGCCGGTCGGCCGTGGGACCTCCTCGTCCCGGCAGCCTCCTCCCCGCCGCCGGCCAGCCTGCCCAGGGAGATGAGTGAGAGAGAGAGGAGGAAGGGAGAGGAGGGGAAAGAGAGAGCATGATGACGTGGCGTCCTGTCATGTGGGGCCACGTAGGTCTCATGATGATTCACCCGCTACGTAGGATAAAACGCGGGGTTAAAACCATTAAAGGATGTAAAGCGACCGGTTTTGTAAGTTAAGGGATGTTATATATCTGGTTTTAGCGGTTGGGGGACGCATTTTGTAATTTGTCGTCCAAAAAAAAGGATACAATCTCGAGG]


>consensus_12431#1 GTCATCGAATTACAAAATCGTTCCCCTACCGTAAAACCGGATACAACGCGTCCCCCAACT TATAAAACCGGTGTAAACTAGATCCTACGGCGATTTTGACTCCGATTTTATCCGACGTGG CAGCTGACTCAGCGTGGGTCCCACATGTCAGCCCCTTCTTTCCCTCCCCTCTCTTCCTCT CTCTCCTCTTCTTTTCTCTCCCTTTCCTCCTCAGTTCGGCAGTGGGCAGGGCAGCCGCCC GGTAGGGGAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTC TTGCGCCCGCCCTCCCACACCGCTGCCGCCGCCAGGGGAGGAGCTGGCGCGCGGCCGTCG GGGAGCGGAGTAGGGCTCGGCCGGCGGGGCGGAGCTGGGCGCGGGCGCTGTGCGCTGTGC ATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGCTCTTCTTCTCCATGCCGTTCAG GGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGGGCATCGTGAAGGTGGCCGCCAT CAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGCACTACTCGACGGCTCGACGCTG GCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCCGCTGATAAAGCTGTTGTACGAC CTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGATGGAGGGATGGCGGCCCAACGCG GAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCACGCGGCGCCGCTGTTGAACCTG ATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTCGCTGATCGTGCTCCACCTGACG GTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCATAGGAAGTCAAGGAGCAGCTGT GGCAACCCGACGCCGTTGCCGACGTCCTCGCCGAGCTCGACCTCCTCAATTCCGAGCTTG GCCGCATCGCCCTCAACGCCTCACTCATCACCGAGGCGCTGGAGTTGTTCGTGGTGTTGT GCGTCGCCGGCAAGATGGTGGGGTCGCCGCGGGGCTCTTCGAGGAACCCGTCCCGGATCC CGCCCCCACCTCCCGCCACGGTAGGCACCACAGCTCGAGCTTGAACCCGCCACTCCCGAA GCCCTCAAATCCGATCACGCCTCCATCGCCGCGACACGCGGCGGCTGCGGCTGCAGCGAC GACCGTGGCAAATGGCAGCGAAGCGGTGGACGACACCGGCGAGTGGACCGACCAAGAGAT GGACATCACCCGCCGCCGCCGCGCACGCCTGAGAGCGTCATCCGCGCGGCGAAGTTCGGC AGCAGGGGCGCTGCTATTGCGGGCCGCACGCCGCACCGCCGGTCGGCCGTCGGACCTCCT CGTCCCGGCAGCCTCCTCCCCGCCGCCGGCCAGCCTGCCCAGGGAGATGAGTGAGAGAGA GAGGAGGAAGGGAGAGGAGGGGAAAGAGAGAGCATGATGACGTGGCGTCCTGACATGTGG GGCCACGTAGGTCTCATGATGACTCACCCGCTACGTAGGATAAAACCGGGGTTAAAACCA TTAAAGGATGTAAAGCGAACGGTTTTGTAAGTTAAGTGATGTTATATATCTGGTTTTACG GTTGGGGGATGATTTTGTAATTTGTCGTCCAAAAAAAAGGATACAATCTCGAGG



consensusID : consensus_12431#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 735
fasta sequence
                              [TCATAAATGTAGGAGTAGGAGAGTATCTGCTCCTCTCATCCCATCCCATCCCATCCTATCCTATCCTATCCATCTGCTGCTGCAAAAACAGGCGTAGAAGCGACGTAGCTATACGCCTATCCTGCGAAAATCTGTACAGATGACAGTACAGGAAAGATTGGAAAAAGTACACCCAAGGACTCTCAACTTGTCATCAAATTACAAAATCATCCCCCAACCGTAAAACCAGATATATAACATCACTTAACTTACAAAACCGTTCGCTTTACATCCTTTAATGGTTTTAACCCCGGTTTTATCCTACGTAGCGGGTGAGTCATCATGAGACCTACGTGGCCCCACATGTCAGGACGCCACGTCATCATGCTCTCTCTTTCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCACTCATCTCCCTGGGCAGGCTGGCCGGCGGCGGGGAGGAGGCTGCCGGGACGAGGAGGTCCGACGGCCGACCGGCGGTGCGGCGTGCGGCCCGCAATAGCAGCGCCCCTGCTGCCGAACTTCGCCGCGCGGATGACGCTCTCAGGCGTGCGCGGCGGCGGCGGGTGATGTCCATCTCTTGGTCGGTCCACTCGCCGGTGTCGTCCACCGCTTCGCTGCCATTTGCCACGGTCGTCGCTGCAGCCGCAGCCGCCGCGTGTCGCGGCGATGGAGGCGTGATCGGATTTGAGGGCTTCGGGAGTGGCGGGTTCAAGCTCGAGCTGTGGTGCC]

[+] EMBL CB667608             [TCATAAATGTAGGAGTAGGAGAGTATCTGCTCCTCTCATCCCATCCCATCCCATCCTATCCTATCCTATCCATCTGCTGCTGCAAAAACAGGCGTAGAAGCGACGTAGCTATACGCCTATCCTGCGAAAATCTGTACAGATGACAGTACAGGAAAGATTGGAAAAAGTACACCCAAGGACTCTCAACTTGTCATCAAATTACAAAATCATCCCCCAACCGTAAAACCAGATATATAACATCACTTAACTTACAAAACCGTTCGCTTTACATCCTTTAATGGTTTTAACCCCGGTTTTATCCTACGTAGCGGGTGAGTCATCATGAGACCTACGTGGCCCCACATGTCAGGACGCCACGTCATCATGCTCTCTCTTTCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCACTCATCTCCCTGGGCAGGCTGGCCGGCGGCGGGGAGGAGGCTGCCGGGACGAGGAGGTCCGACGGCCGACCGGCGGTGCGGCGTGCGGCCCGCAATAGCAGCGCCCCTGCTGCCGAACTTCGCCGCGCGGATGACGCTCTCAGGCGTGCGCGGCGGCGGCGGGTGATGTCCATCTCTTGGTCGGTCCACTCGCCGGTGTCGTCCACCGCTTCGCTGCCATTTGCCACGGTCGTCGCTGCAGCCGCAGCCGCCGCGTGTCGCGGCGATGGAGGCGTGATCGGATTTGAGGGCTTCGGGAGTGGCGGGTTCAAGCTCGAGCTGTGGTGCC]
[+] EMBL CB667610             [        GTAGGAGTAGGAGAGTATCTGCTCATCTCATCCCATCCCATCCCATCCTATCCTATCCTATCCATCTGCTGCTGCAAAAACAGGCGTAGAAGCGACGTAGCTATACGCCTATCCTGCGAAAATCTGTACAGATGACAGTACAGGAAAGATTGGAAAAAGTACACCCAAGGACTCTCAACTTGTCATCAAATTACAAAATCATCCCCCAACCGTAAAACCAGATATATAACATCACTTAACTTACAAAACCGTTCGCTTTACATCCTTTAATGGTTTTAACCCCGGTTTTATCCTACGTAGCGGGTGAGTCATCATGAGACCTACGTGGCCCCACATGTCAGGACGCCACGTCATCATGCTCTCTCTTTCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCACTCATCTCCCTGGGCAGGCTGGCCGGCGGCGGGGAGGAGGCTGCCGGGACGAGGAGGTCCGACGGCCGACCGGCGGTGCGGCGTGCGGCCCGCAATAGCAGCGCCCCTGCTGCCGAACTTCGCCGCGCGGATGACGCTCTCAGGCGTGCGCGGCGGCGGCGGGTGATGTCCATCTCTTGGTCGGTCCACTCGCCGGTGTCGTCCACCGCTTCGCTGCCATTTGCCACGGTCGTCGCTGCAGCCGCAGCCGCCGCGTGTCGCGGCGATGGAGGCGTGATCGGATTTGAGGGCTTCGGGAGTGGCGGGTTCA                  ]


>consensus_12431#2 TCATAAATGTAGGAGTAGGAGAGTATCTGCTCCTCTCATCCCATCCCATCCCATCCTATC CTATCCTATCCATCTGCTGCTGCAAAAACAGGCGTAGAAGCGACGTAGCTATACGCCTAT CCTGCGAAAATCTGTACAGATGACAGTACAGGAAAGATTGGAAAAAGTACACCCAAGGAC TCTCAACTTGTCATCAAATTACAAAATCATCCCCCAACCGTAAAACCAGATATATAACAT CACTTAACTTACAAAACCGTTCGCTTTACATCCTTTAATGGTTTTAACCCCGGTTTTATC CTACGTAGCGGGTGAGTCATCATGAGACCTACGTGGCCCCACATGTCAGGACGCCACGTC ATCATGCTCTCTCTTTCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCACTCATCTCCCTGG GCAGGCTGGCCGGCGGCGGGGAGGAGGCTGCCGGGACGAGGAGGTCCGACGGCCGACCGG CGGTGCGGCGTGCGGCCCGCAATAGCAGCGCCCCTGCTGCCGAACTTCGCCGCGCGGATG ACGCTCTCAGGCGTGCGCGGCGGCGGCGGGTGATGTCCATCTCTTGGTCGGTCCACTCGC CGGTGTCGTCCACCGCTTCGCTGCCATTTGCCACGGTCGTCGCTGCAGCCGCAGCCGCCG CGTGTCGCGGCGATGGAGGCGTGATCGGATTTGAGGGCTTCGGGAGTGGCGGGTTCAAGC TCGAGCTGTGGTGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12431#0      TCCCTCCCTCATGCACGCTGACGCTGCAATGCTCCTCCTCTGCGGCGGCTAGATCATTCA 60
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      TTCCAACAATTAAATTAACAATAATTGAATTGAAGGACATTAATTAGTTTGATCGATGGC 120
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GGGTGCAAACGCGTCGACGGTGAAGCCGGTGGTGGCGGCGTGCTACGACAACAACCTGGT 180
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GAACTCGCAGGGGATGTTCCTGGGCGACGAGCCGCTGCGCTTCGCCCTCCCGCTCCTCCT 240
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GGTGCAGGTCTCCATCATCCTCATCCTCTCCGCCGCCGCCCACCACGTCCTCCGCCGCCT 300
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CGGCCAGTGCCGCTTCGTGACCCACATGCTCGTCGGCATCTTCCTCGGCCCCTCCGTCCT 360
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CGGCCGCAACCCTCACCTCCGCACCGCCCTCTTCTCCGAGCGCGGCACCTACATCCTCGA 420
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GAGCGTCTCCCTCGTCGCCCTCATCCTCTTCCTCTTCTCCATGGCCGTCAAGACCGACCT 480
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CACCCTCCTCCGCCGCCCCACCGCCCGAGCCCTCGCCGTCGGCCTCGCCGGCTCCCTCGT 540
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CCCCCTCGCCGTCACCCTCCCCGTCTTCCACGCCCTCAGCCCCTCCCTCCCCGCCGACCT 600
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CCGCGGCTCCTCCCTCATCACCGAGCTCGCCGTCCGCCTCTCCCTCTCCTCCTTCCCCGT 660
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CGTCGCCGACGCCCTCGCCGAGCTCGACCTCCTCAACTCCGAGCTCGGCCGCGTCGCCCT 720
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CAACGCCTCCCTCATCACCGACGTCACCTCCTGGTTCCTCCGCGCCTGCTTCGCCGCCGC 780
consensus_12431#1      -----------------------------------GTCATCG-AATTACAAAATCGTTCC 24
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CTTCCTCATCACCCAGGCTAAGTCCCCGCTCTTCACCGCCAAGGTCCTCGCCTCCTTCGC 840
consensus_12431#1      CCTAC-CGTAAAACCGGATACAACGCGTCCCCCAACTTATAAAACCGGTGTAAACTAGAT 83
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CGCCTTCGTCCTCTTCGTCTTCTTCGTCGCCCGCCCCGCCGGCCGCTACATCGCCCGCAA 900
consensus_12431#1      C--CTACGGCGATTTTGACTCCGATTTTATCCGACGTGGCAGCTGACTCAGCGT------ 135
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GCGCACCCCGCCCGGGGACCTCCTCTCCGAGGGCTCCTTCGTCCTCGTCGTCATCGCCGC 960
consensus_12431#1      --GGGTCCCACATGTCAGCCCCTTCTTTCCCTCCCCTCTCTTCCTCTCTCTCCTCTTCTT 193
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GCTGCTCTCCGCGCTCGTCACCGACGTCATCGGCTTCAAGTTTATGATCGGCCCCATGAT 1020
consensus_12431#1      TTCTCTCCCTTTCCTCCTCAGT-------TCGGCAGTGGGCAGGGCAGCCGCCCGGTAGG 246
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GCTGGGCCTCGCGCTCCCCGGCGGCATGCCCATCGGCGCCACCCTCACGGAGCGCCTCGA 1080
consensus_12431#1      G--GAGGCGGGAGTCCGGTGGCCGGCGACGAGGTGGCGACGGCGCCGCATGGCCTCTTGC 304
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CTCCTTCTTCATCGCGCTCTTCCTCCCGGTCTACATGGCGCTCGCCGGCTACCGCACCGA 1140
consensus_12431#1      GCCCGCCCTC-CCACACCGCTGCCGCCG--CCAGGGGAGG------AGCTGGCGCGCGGC 355
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CCTGGCGGAGCTGAGCCTGATAGGCGTCAGCGCGGAGCACGAGGAGAAGTTCTGCGCGCT 1200
consensus_12431#1      CGTCGGGGAGCGGAG-----TAGGGCTCGGC-CGG----CGGGGCGGAG--CTGGGCGCG 403
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GGAGCTGTTCGTGGCGCTGTGCGTGGCCGGCAAGATGGTGGGG-TGCGTCGCGGCGGGGC 1259
consensus_12431#1      GGCGCTGT-----GCGCTGTGCATTGTCGAAAAGATGGTGGGGGTGCATCGCCGTGGGGC 458
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      TCTTCTTCTCCATGCCGTTCCGGGAGGCCACCGTGCTGGCGCTGATGCTCAACATCCGGG 1319
consensus_12431#1      TCTTCTTCTCCATGCCGTTCAGGGAGGCCACCATGCTGGCGCTGATGCTCAACATCCGGG 518
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GCATCGTGGAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGC 1379
consensus_12431#1      GCATCGTGAAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCGGAGC 578
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      ACTACTCGACG--------CTGACGCTGTCGATGGTGGTCATCACGGCGGTGGCGACGCC 1431
consensus_12431#1      ACTACTCGACGGCTCGACGCTGGCGCTGTCGATGGTGGTGATCACGGCGGTGGCGACGCC 638
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GCTGATCAAGCTGCTGTACGACCCGTCGGGGAGGTTCGCGCGGGCGAAGCGGCGGACCAT 1491
consensus_12431#1      GCTGATAAAGCTGTTGTACGACCTGTCGGGGAGGTTCGGGCGGGCGAAGCGGCGGACGAT 698
consensus_12431#2      ----------------------------------------------------TCATAAAT 8
                                                                                 **

consensus_12431#0      GGAGGAGTCGCGGCCCAACGCGGAGCTGCGGGTGATGGCCTGCCTCTTCAGCGAGGACCA 1551
consensus_12431#1      GGAGGGATGGCGGCCCAACGCGGAGCTGCGCGTGATGGCGTGCCTGTTCAGTGAGGACCA 758
consensus_12431#2      GTAGGAGTAGGAGAGTATCT----GCTCCTC-TCATCCCATCCCATCCCATCCTATCCTA 63
                       * ***  * *  *   * *     *** *   * **  * * **    **       * *

consensus_12431#0      CGCGGCGCCGCTGCTGGACCTGATCGAGGCGTCGGGGTCGTCGCGCGACGCCCCCGTGTC 1611
consensus_12431#1      CGCGGCGCCGCTGTTGAACCTGATCGAGGAGTCGGGCTCATCGCGCGACGCGCCGATGTC 818
consensus_12431#2      TCCTATCCATCTGCTGCTGCAAAAACAGGCGTAGAAGCGACGTAGCTATACGCCTATCCT 123
                         *    *  *** **   *  *   *** ** *          ** *  * **  *   

consensus_12431#0      GCTGATCGTGCTCCACCTGACGGAGCTGGTGGGGCACGCGGCGTCCGTGCTGAAGCCGCA 1671
consensus_12431#1      GCTGATCGTGCTCCACCTGACGGTGCTCGTGGGGCATGCGACGTCAGTGCTGAAGCCGCA 878
consensus_12431#2      GCGAAAATCTGTACAGATGACAGTACAGGAAAGATTGGAAAAAGTACACCCAAGGACTCT 183
                       **  *      * **  **** *  *  *   *    *           *  * * * * 

consensus_12431#0      CAGGAAGTCCCGGAGCAGCTGCGGCAACCCGACGCCGTCGGACCGCATCGTGAACGCGTT 1731
consensus_12431#1      TAGGAAGTCAAGGAGCAGCTGTGGCAACCCGACGCCGTTGC-CGACGTCCTCGCCGAGCT 937
consensus_12431#2      CAACTTGTCATCAAATTACAAAATCATCCCCCAACCGTAAAACCAGATATATAACATCAC 243
                        *    ***    *    *     ** ***    ****    *    *      *     

consensus_12431#0      CCGCTACTTCGAGCAGCAGGCGCCGCTGGGGGCGGTGACGGTGAGCCCGTACGTGGTGG- 1790
consensus_12431#1      CGACCTCCTCAATTC-CGAGC----TTGGCCGCATCGCCCTCAACGCCTCACTCATCAC- 991
consensus_12431#2      TTAACTTACAAAACCGTTCGCTTTACATCCTTTAATGGTTTTAACCCCGGTTTTATCCTA 303
                                  *       **               *      *  **            

consensus_12431#0      CGTCGCCGTACAGCAGCATGCAGCACGACGTGT-GCCTCCTGGCGCACAGCCGCAAGGCC 1849
consensus_12431#1      CGAGGCGCTGGAGTTGTTCGTGGTGTTGTGCGTCGCCGGCAAGATGGTGGGGTCGCCGCG 1051
consensus_12431#2      CGTAGCGGGTGAGTCATCATGAGACCTACGTGGCCCCACATGTCAGGACGCCACGTCATC 363
                       **  **     **         *      * *   **            *   *      

consensus_12431#0      AACCTCATCCTGCTCCCCTTCCACAAGTCCTCGGACGGCGCCCGGAG--CACCGCCAACA 1907
consensus_12431#1      GGGCTCTTCGAGGAACCCGTCCCGGATCCCGCCCCCACCTCCCGC----CACGGTAGGCA 1107
consensus_12431#2      ATGCTCTCTCTTTCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCACTCATCTCCCTGGGCA 423
                          ***         **    *      ** *      * * *      * *      **

consensus_12431#0      ACGCCATCCGCGGCATCAACCGGTCGGTGATGCAGTACGCGCCGTGCTCGGTGGGCATCC 1967
consensus_12431#1      CCACAGCTCG-AGCTTGAACCCGCCACTCCCGAAGCCC---TCAAATCCGATCA-CGCCT 1162
consensus_12431#2      GGCTGGCCGGCGGCGGGGA--GGAGGCTGCCGGGACGA---GGAGGTCCGACGGCCGAC- 477
                                *  **    *   *    *   *                **     *  * 

consensus_12431#0      TGATCGAC----CACGGGGTGGCGGCGGGGTCGGCGTGCGCCACGGCGTCCAACAGCACG 2023
consensus_12431#1      CCATCGCCGCGACACGCGGCGGCTGCGGCTGCAGCGACGACCGTGGCAAATGGCAG--CG 1220
consensus_12431#2      -CGGCGGTGCGGCGTGCGGC--CCGCAATAGCAGCGCCCCTGCTGCCGAACTTC-----G 529
                           **      *  * **   * **     * ***        * *      *     *

consensus_12431#0      CTGCAGCGGGTGGCGCTCTACTTCCTGGGCGGCGCCGACGACCGGGAGGCGCTGGCGTAC 2083
consensus_12431#1      AAGCGGTGGACGACACC--GGCGAGTGGACCG-ACCAAGAGATGGACATCACCCGCCGCC 1277
consensus_12431#2      CCGC-GCGGATGACGCTCTCAGGCGTGCGCGGCGGCGGCGGGTGATGTCCATCTCTTGGT 588
                         ** * **  * * *         **  * *   *       *     *          

consensus_12431#0      GTGGCGCGGATGGCGGAGTGCGGTTTGGTGGCGGTGACGGTGGTGCGGCTGAAGCTGCGG 2143
consensus_12431#1      GCCGCGC--ACGCCTGAGAGCGTCATCCGCGCGGCGAAGTTCG-GCAGCAGGGGCGCTGC 1334
consensus_12431#2      -CGGTCCACTCGCCGGTGTCGTCCACCGCTTCGCTGCCATTTG-CCACGGTCGTCGCTGC 646
                          *  *    * * * *             **  *    * *  *        *   * 

consensus_12431#0      GACTGGGT--GGGG-ATGGGGGGCCGC-GACGA-GATGAGGGACGAGGAGGCGCTGCAGG 2198
consensus_12431#1      TATTGCGG--GCCGCACGCCGCACCGCCGGTCG-GCCGTCGGACCTCCTCGTCCCGGCAG 1391
consensus_12431#2      AGCCGCAGCCGCCGCGTGTCGCGGCGATGGAGGCGTGATCGGATTTGAGGGCTTCGGGAG 706
                           *     *  *   *  *   **  *     *     ***       *    *   *

consensus_12431#0      AGTTCTGGCAGAGGTACAGCTGCGCGGGCGCGGAGAGGGTGGCGTACGTGGAGAAGACGG 2258
consensus_12431#1      CCTCCTCCCCGCCGCCGGCCAGCCTGCCCAGGGAGATGAGTGAGAGAGAGAGGAGGAAGG 1451
consensus_12431#2      TGGCGGGTTCAAGCTCGAGCTGTGGTGCC------------------------------- 735
                                          * *      *                               

consensus_12431#0      TGGAGGACGGGGAGGGGACGGCGTCG----GTGGTGCGC-GCCATGAGCGACAAGTTCGA 2313
consensus_12431#1      GAGAGGAGGGGAAAGAGAGAGCATGATGACGTGGCGTCCTGACATGTGGGGCCACGTAGG 1511
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CCTGCTGGTGGTTGGTAGGAGAGAGGGCGGCGGCGACGGCGCGGAGGGGTCGTCGGCGGC 2373
consensus_12431#1      TCTCATGATGACTCACCCGCTACGTAG-GATAAAACCGGGGTTAAAA--CCATTAAAGGA 1568
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      GGCGCTGACGAGCGGGCTGTCGGAGTGGAGCGAGTTCCCGGAGCTGGGAGTGCTGG-GCG 2432
consensus_12431#1      TGTAAAG-CGAACGGTTT-TGTAAGTTAAGTGATGTTATATATCTGGTTTTACGGTTGGG 1626
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      ACATGCTTGCCTCCGCCGACTTCGCGGCCAAGGTCTCTATCCTCGTCGTCCAGCAGCAGG 2492
consensus_12431#1      GGATGATTTTGTAATTTGTCGTCCAAAAAAAAGGATACAATCTCGAGG------------ 1674
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      CCGCCACCAGGAACGACGCCGATTACTGACTTAATTGGCTAGTCATGCTGATATACTACC 2552
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      ACATTCCCTCTGCTCTTCTCTTCTCTGCTCTGCTGCAATATTAGTGTTCTTCTCCAAGTA 2612
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      ATCTTGTGTTTTAGGATTTTTGGCGAGCTTCTGTATTTTACTGTACCTAGGATTGCATAA 2672
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      TCTTGCTTTGATTCTGGACACAGTCTAGATTTCTATCGCTAGGAATATGTACAAGTATGC 2732
consensus_12431#1      ------------------------------------------------------------
consensus_12431#2      ------------------------------------------------------------
                                                                                   

consensus_12431#0      ATATGATATTGACATATATC 2752
consensus_12431#1      --------------------
consensus_12431#2      --------------------
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)