cluster # 12433

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Oryza sativa
cluster # 12433 cluster # 12433 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12433#0 length = 1023 sequences # 7
consensus_12433#1 length = 416 sequences # 1

consensus_12433#2 length = 265 sequences # 1
consensus_12433#3 length = 257 sequences # 1

consensusID : consensus_12433#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1023
fasta sequence

                              [TGTTCAAGCTCACCTCAGTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGCGTGGTACATGCCGGCGGCGGCGCCGGCAC-CGATGGTGGAGAGCGCGGTGGC-GCGGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCGTGAAGCGCCTCTTCTGCGGCATGGGGGTGCACCCGACGGTGCACGAGCTGGACCTCGACCCGCGCGGCCGCGAGCTGGAGCGCGCCCTGGCGCGCCTCGTCGGGTACGGCGGCCCCGCCGCCGCGTCGCCGCCCGTCGTCCCCGTCGTCTTCATCGGCGGCAAGCTCGTCGGCGCCATGGACCGCGTCATGGCCGCGCACATCAACGGCTCCCTCGTCCCCCTCCTCAAGGAGGCCGGCGCGCTCTGGCTCTAGGCCTCGCCCGCCCGCCATTGGCGTGCTCTGGCTTAGCCCCCCTAGTATACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGCTGCTAATGAAGAAGATGAAGATGATGATGATGACTAGCAAGTAGTTGATTGATTTAGCTGCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCATGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCGCTGGATTTGCTTGC-TTTGATGCTGCATGCTATTGCTAGCTACTGAAATTACTACTACCAGTGTTTTATTTAAAAAAA]

[+] EMBL AK073461             [TGTTCAAGCTCACCTCAGTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGCGTGGTACATGCCGGCGGCGGCGCCGGCAC CGATGGTGGAGAGCGCGGTGGC GCGGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCGTGAAGCGCCTCTTCTGCGGCATGGGGGTGCACCCGACGGTGCACGAGCTGGACCTCGACCCGCGCGGCCGCGAGCTGGAGCGCGCCCTGGCGCGCCTCGTCGGGTACGGCGGCCCCGCCGCCGCGTCGCCGCCCGTCGTCCCCGTCGTCTTCATCGGCGGCAAGCTCGTCGGCGCCATGGACCGCGTCATGGCCGCGCACATCAACGGCTCCCTCGTCCCCCTCCTCAAGGAGGCCGGCGCGCTCTGGCTCTAGGCCTCGCCCGCCCGCCATTGGCGTGCTCTGGCTTAGCCCCCCTAGTATACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGCTGCTAATGAAGAAGATGAAGATGATGATGATGACTAGCAAGTAGTTGATTGATTTAGCTGCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCATGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCGCTGGATTTGCTTGC TTTGATGCTGCATGCTATTGCTAGCTACTGAAATTACTACTACCAG                 ]
[+] EMBL AU092797             [               CAGTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGCGTGGTACATGCCGGCGGCGGCGCCGGCAC CGATGGTGGAGAGCGCGGTGGC GCGGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCGTGAAGCGCCTCTTCTGCGGCATGGGGGTGCACCCGACGGTGCACGAGCTGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU069644             [                AGTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCANATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGCGTGGTACATGCCGGCGGCGGCG CNGCACACGATGGTGGAGAGCGCGGTGGCNGGNGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTNA CAGCTGCTGCATGTGCCACGCCGTNAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU092798             [                                                                      GTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATNCAGTACGGAGCGGCGNCCGAGCAGGCGTGGTACATGCCGGCGGCGGCGCCGGCAC CGATGGTGGAGAGCGCGGTGGC GCGGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCGTGAAGCGCCTCTTCTGCGGCATGGGGGTGCACCCGACGGTGCACGAGCTGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL C98105               [                                                                                                                                                                                                                                                                                                                                                                                                                                 TCGGGTACGGCGGCCCCGCC CGNAGTCGCCGCCCGTCGTCCCCGTCGTCTTCATCGGCGGCAAGCTCGTCGGCGCCATGGACCGCGTCATGGCCGCGCACATCAACGGCTCCCTCGTCCCCCTCCTCAAGGAGGCCGGCGCGCTCTGGCTCTAGGCCTCGCCCGCCCGCCATTGGCGTGCTCTGGCTTAGCCCCCCTAGTATACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGCTGCTAATGAAGAAGATGAAGATGATGATGATGACTAGCAAGTAGTTGATTGATTTAGCTGCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCATGCTTCGCGCGCGCGCGCNC ATTGTGGTTGTTTGTTNGCGCGTGCG TGGATTTGCTTNCTTTTGATGCTGGATG                                                 ]
[-] EMBL OS0710A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCTGCTGCTAATGAAGNAGNTGAAGATGATGATGATGACTAGCAAGTAGTTGANTGATTTAGCTGCTGCTAATAGGATANCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCATGCATNTCG NCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCGCTGGATTTGCTTGC TTTGATGCTGCATGCTATTGCTAGCTACTGAAATTACTACTAC                    ]
[-] EMBL CF328769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCAAGTGGTTGATTGATTTAGCTGCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCATGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCGCTGGATTTGCTTGC TTTGATGCTGCATGCTATTGCTAGCTACTGAAATTACTACTACCAGTGTTTTATTTAAAAAAA]




>consensus_12433#0
TGTTCAAGCTCACCTCAGTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGC
TCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACAT
CTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCG
GCCGAGCAGGCGTGGTACATGCCGGCGGCGGCGCCGGCACCGATGGTGGAGAGCGCGGTG
GCGCGGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTGAGCAGCTGC
TGCATGTGCCACGCCGTGAAGCGCCTCTTCTGCGGCATGGGGGTGCACCCGACGGTGCAC
GAGCTGGACCTCGACCCGCGCGGCCGCGAGCTGGAGCGCGCCCTGGCGCGCCTCGTCGGG
TACGGCGGCCCCGCCGCCGCGTCGCCGCCCGTCGTCCCCGTCGTCTTCATCGGCGGCAAG
CTCGTCGGCGCCATGGACCGCGTCATGGCCGCGCACATCAACGGCTCCCTCGTCCCCCTC
CTCAAGGAGGCCGGCGCGCTCTGGCTCTAGGCCTCGCCCGCCCGCCATTGGCGTGCTCTG
GCTTAGCCCCCCTAGTATACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGC
TGCTAATGAAGAAGATGAAGATGATGATGATGACTAGCAAGTAGTTGATTGATTTAGCTG
CTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAA
TCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAGAT
CGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCAT
GCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCGCTGGATTTGCTTGC
TTTGATGCTGCATGCTATTGCTAGCTACTGAAATTACTACTACCAGTGTTTTATTTAAAA
AAA

consensusID : consensus_12433#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 416
fasta sequence

                              [GGCTTAGCCCCCCTAGTANACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGCTGCTAATGAAGAAGATGAAGATGATGATGATGACTANCAAGTAGTTGATTGATTTANCTGCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTTANAGTGAGTNAGCTAGAGCTANAANAANANAGATCNAGGTTGGTGTGTGTGTGCTTTTTTTTTCACGACGACTGCCTCTGTCCGTNTCGTGCATGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCNCTGGATTTGCTTGCTTTGATGCTGCATGCTATTGCTAGCTACTGAAATTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU181744             [GGCTTAGCCCCCCTAGTANACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGCTGCTAATGAAGAAGATGAAGATGATGATGATGACTANCAAGTAGTTGATTGATTTANCTGCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAATCAGTGTGTGAGTGAGTGTGTGTTTTANAGTGAGTNAGCTAGAGCTANAANAANANAGATCNAGGTTGGTGTGTGTGTGCTTTTTTTTTCACGACGACTGCCTCTGTCCGTNTCGTGCATGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCNCTGGATTTGCTTGCTTTGATGCTGCATGCTATTGCTAGCTACTGAAATTTAAAAAAAAAAAAAAAAAAA]




>consensus_12433#1
GGCTTAGCCCCCCTAGTANACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTG
CTGCTAATGAAGAAGATGAAGATGATGATGATGACTANCAAGTAGTTGATTGATTTANCT
GCTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTA
ATCAGTGTGTGAGTGAGTGTGTGTTTTANAGTGAGTNAGCTAGAGCTANAANAANANAGA
TCNAGGTTGGTGTGTGTGTGCTTTTTTTTTCACGACGACTGCCTCTGTCCGTNTCGTGCA
TGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCNCTGGATTTGCTTG
CTTTGATGCTGCATGCTATTGCTAGCTACTGAAATTTAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12433#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 265
fasta sequence

                              [GTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGGTGGGTACATGCCGNCGNGCNCANACAGNATNGGGTGGAAGAGCGCGGTGGCAGNTNGGGAGCGGCTGGCNTCCGGAGAGCGCGGTGGTGGT]

[+] EMBL C27820               [GTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGGTGGGTACATGCCGNCGNGCNCANACAGNATNGGGTGGAAGAGCGCGGTGGCAGNTNGGGAGCGGCTGGCNTCCGGAGAGCGCGGTGGTGGT]




>consensus_12433#2
GTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGCTCAGCTCTCTGTGCTTC
TCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACATCTCCATTTGTGCATCAG
ATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCGGCCGAGCAGGGTGGGTA
CATGCCGNCGNGCNCANACAGNATNGGGTGGAAGAGCGCGGTGGCAGNTNGGGAGCGGCT
GGCNTCCGGAGAGCGCGGTGGTGGT

consensusID : consensus_12433#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 257
fasta sequence

                              [CGGTGCTAGCTAATTAANCAGTGTGTGANTGANTGTGTGTTTGAGANTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTNTCGTGCATGCTTGTNNNNCGNGCGNGCATGTGGTTGTTTGTTGGCCGTGCGCTGGATTTGCTTGCTTTGATGCTGCATGCTATTGCTAGCTACTGNNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU091776             [CGGTGCTAGCTAATTAANCAGTGTGTGANTGANTGTGTGTTTGAGANTGAGTGAGCTAGAGCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTNTCGTGCATGCTTGTNNNNCGNGCGNGCATGTGGTTGTTTGTTGGCCGTGCGCTGGATTTGCTTGCTTTGATGCTGCATGCTATTGCTAGCTACTGNNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12433#3
CGGTGCTAGCTAATTAANCAGTGTGTGANTGANTGTGTGTTTGAGANTGAGTGAGCTAGA
GCTAGAAGAAGAGAGATCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCT
CTGTCCGTNTCGTGCATGCTTGTNNNNCGNGCGNGCATGTGGTTGTTTGTTGGCCGTGCG
CTGGATTTGCTTGCTTTGATGCTGCATGCTATTGCTAGCTACTGNNNTTAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      TGTTCAAGCTCACCTCAGTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAGCTAGC 60
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      TCAGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCACACACAT 120
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      CTCCATTTGTGCATCAGATCACCGGCCAGGTCGTCGGCGAGAATGCAGTACGGAGCGGCG 180
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      GCCGAGCAGGCGTGGTACATGCCGGCGGCGGCGCCGGCACCGATGGTGGAGAGCGCGGTG 240
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      GCGCGGGTGGAGCGGCTGGCGTCGGAGAGCGCGGTGGTGGTGTTCAGCGTGAGCAGCTGC 300
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      TGCATGTGCCACGCCGTGAAGCGCCTCTTCTGCGGCATGGGGGTGCACCCGACGGTGCAC 360
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      GAGCTGGACCTCGACCCGCGCGGCCGCGAGCTGGAGCGCGCCCTGGCGCGCCTCGTCGGG 420
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      TACGGCGGCCCCGCCGCCGCGTCGCCGCCCGTCGTCCCCGTCGTCTTCATCGGCGGCAAG 480
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      ------------------------------------------------------------
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      CTCGTCGGCGCCATGGACCGCGTCATGGCCGCGCACATCAACGGCTCCCTCGTCCCCCTC 540
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      -----------------------------------------------------------G 1
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      CTCAAGGAGGCCGGCGCGCTCTGGCTCTAGGCCTCGCCCGCCCGCCATTGGCGTGCTCTG 600
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      GCTTAGCCCCCCTAGTANACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGC 61
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      GCTTAGCCCCCCTAGTATACCTAGCACGCAAAAAGCTTTACCTGCTGCTGCTGCTGCTGC 660
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      TGCTAATGAAGAAGATGAAGATGATGATGATGACTANCAAGTAGTTGATTGATTTANCTG 121
consensus_12433#3      ------------------------------------------------------------
consensus_12433#0      TGCTAATGAAGAAGATGAAGATGATGATGATGACTAGCAAGTAGTTGATTGATTTAGCTG 720
consensus_12433#2      ------------------------------------------------------------
                                                                                   

consensus_12433#1      CTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAA 181
consensus_12433#3      -------------------------------------------CGGTGCTAGCTAATTAA 17
consensus_12433#0      CTGCTAATAGGATATCCATCGATCGAGATACAGCCCATTTACACGGTGCTAGCTAATTAA 780
consensus_12433#2      ----------------------GTTGATTCTAGCTTAGCAACACACAAGCACACAGCTAG 38
                                                                  *      *   *  ** 

consensus_12433#1      TCAGTGTGTGAGTGAGTGTGTGTTTTANAGTGAGTNAGCTAGAGCTANAANAANANAG-A 240
consensus_12433#3      NCAGTGTGTGANTGANTGTGTGTTTGAGANTGAGTGAGCTAGAGCTAGAAGAAGAGAG-A 76
consensus_12433#0      TCAGTGTGTGAGTGAGTGTGTGTTTGAGAGTGAGTGAGCTAGAGCTAGAAGAAGAGAG-A 839
consensus_12433#2      CTAGCTC--AGCTCTCTGTGCTTCTCTAGCTAAGCTAATCGTTTTCAGGCGAAGGAAGCA 96
                         **        *   ****  * *     * **  *         *    **   ** *

consensus_12433#1      TCNAGGTTGGTGTGTGTGTGCTTTTTTTTTCACGACGACTGCCTCTGTCCGTNTCGTGCA 300
consensus_12433#3      TCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTNTCGTGCA 136
consensus_12433#0      TCGAGGTTGGTGTGTGTGTGCTTTTTTCTTCACGACGACTGCCTCTGTCCGTCTCGTGCA 899
consensus_12433#2      CACACATCTCCATTTGTGCATCAGATCACCGGCCA-GGTCGTCGGCGAGAATGCAGTACG 155
                          *  *     * ****       *      * * *   * *   *    *   ** * 

consensus_12433#1      TGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCNC-TGGATTTGCTT 359
consensus_12433#3      TGCTTGTNNNNCGNGCGNGC--ATGTGGTTGTTTGTTGGC-CGTGCGC-TGGATTTGCTT 192
consensus_12433#0      TGCTTCGCGCGCGCGCGCGCGCATGTGGTTGTTTGTTGGCGCGTGCGC-TGGATTTGCTT 958
consensus_12433#2      -GAGCGGCGGCCGAGCAGG-----GTGGGTACATGCCGNCGNGCNCANACAGNATNGGGT 209
                        *         ** **  *     **** *   **  * *  *  *     *  * *  *

consensus_12433#1      GCTTTGATGCTGCATGCTATTGCTAGCTACTGAAATTTAAAAAAAAAAAAAAAAAAA--- 416
consensus_12433#3      GCTTTGATGCTGCATGCTATTGCTAGCTACTGNNNTTAAAAAAAAAAAAAAAAAAAAAAA 252
consensus_12433#0      GCTTTGATGCTGCATGCTATTGCTAGCTACTGAAATTACTACTACCAGTGTTTTATTTAA 1018
consensus_12433#2      GGAAGAGCGCGGTGGCAGNTNGGGAGCGGCTGGCNTCCGGAGAGCGCGGTGGTGGT---- 265
                       *       ** *       * *  ***  ***   *    *                   

consensus_12433#1      -----
consensus_12433#3      AAAAA 257
consensus_12433#0      AAAAA 1023
consensus_12433#2      -----