These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12441#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1680 fasta sequence [TCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGG-CGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGG-GCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTGCTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCG-ACCTGGCCGTCTTCGAGCAGTTCGAGCGGCT-GGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCC-TACTTCCTTCTTTTGAATCT-GCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTC-AAAGGTCT-GCTATCACCTTGGAAAGGTAT-ATTGC-TTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGTACTGGGTNCCNCCAAAAAAAAAA] [+] EMBL AK069899 [TCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGG CGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGG GCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTGCTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCG ACCTGGCCGTCTTCGAGCAGTTCGAGCGGCT GGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCC TACTTCCTTCTTTTGAATCT GCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTC AAAGGTCT GCTATCACCTTGGAAAGGTAT ATTGC TTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGGATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGT ] [+] EMBL AU091713 [ TCGTCCGCTTGCCCCGCACCGCAACCGCGGACGC GAGGAGGAGAGCTCTCGCGCCGCGCGTGCGNCCGCGATNACGGNGCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACG GCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGG GGCGCCGAACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTTACTTCCTTCTTTTGAATCTGGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTNAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAAGGTCTGGCTATNACCTTGGAAAGGTATAATTGCTTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAANACAAC ] [+] EMBL AK062045 [ TAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGCCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGA ] [+] EMBL AU055909 [ GAGAAACGTATTC TGGTCCCTTCCCAGAGCAAGAAGCTA ACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGTACTGGGTNCCNCCAAAAAAAAAA] consensusID : consensus_12441#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1626 fasta sequence [GCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCACCCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGG-AGAAACGTATTCTTGTTCCC-TTACCAGAGCAAG-AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATAAAAGAAAAAAAAAAAAACTCGAG] [+] EMBL AK065017 [GCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCACCCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGG AGAAACGTATTCTTGTTCCC TTACCAGAGCAAG AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGA ] [+] EMBL C73417 [ GCAATGTTGCGCCGTTTGG AGAAACGTATTCTTGTTCCC TTACCAGAGCAAG AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTC ] [+] EMBL AU165692 [ TTGCNCCGTTTGGAAGAAACGTATTCNTGGTCCCNTTACCAGAGCAAGAAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAAAAAAA ] [-] EMBL CF196525 [ nGGCACAATGANTATCCCATATGATNNNNNNGTGGAGAAANNNGNAGGATATTCANNNNNNGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTNCNTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATAAAAAAAAAAAAAAAAAACTCGAG] [-] EMBL D43392 [ ACAACATAGATTGCTGAATTNCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTG ] consensusID : consensus_12441#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence [AGGACGAGACAAGGGGGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTCCAAAAAAAAAAAAA] [-] EMBL CA762989 [AGGACGAGACAAGGGGGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTCCAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12441#0 TCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCT 60 consensus_12441#1 -----------GCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCT 49 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 CTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCA 120 consensus_12441#1 CTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCA 109 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 TGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTGCT 180 consensus_12441#1 TGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACT 169 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 ACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACG 240 consensus_12441#1 ACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACG 229 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 GCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCT 300 consensus_12441#1 GCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCA 289 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 CCGCGGCGCACGCCAACGGCGGCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGG 360 consensus_12441#1 CC--------------------CGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGG 329 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 AGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTAC 420 consensus_12441#1 AGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTAC 389 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 TTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCA 480 consensus_12441#1 TTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCA 449 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 TTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTC 540 consensus_12441#1 TTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTC 509 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 TTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTAT 600 consensus_12441#1 TTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTAT 569 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 CACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAA 660 consensus_12441#1 CACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAA 629 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 AAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCA 720 consensus_12441#1 AAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCA 689 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 GTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATC 780 consensus_12441#1 GTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATC 749 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 ATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAG 840 consensus_12441#1 ATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAG 809 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 CTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATG 900 consensus_12441#1 CTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATG 869 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 GGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAAC 960 consensus_12441#1 GGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAAC 929 consensus_12441#2 ------------------------------------------------------------ consensus_12441#0 TGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAG 1020 consensus_12441#1 TGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAG 989 consensus_12441#2 AGGACGAGACAAGGG---------GGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAG 51 *** * *** * *********************************** consensus_12441#0 AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCC 1080 consensus_12441#1 AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCC 1049 consensus_12441#2 AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCC 111 ************************************************************ consensus_12441#0 CATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGT 1140 consensus_12441#1 CATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGT 1109 consensus_12441#2 CGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGT 171 * ********************************************************** consensus_12441#0 GCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAG 1200 consensus_12441#1 GCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAG 1169 consensus_12441#2 GCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAG 231 ************************************************************ consensus_12441#0 AAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGC 1260 consensus_12441#1 AAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGC 1229 consensus_12441#2 AAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGC 291 ************************************************************ consensus_12441#0 TTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCA 1320 consensus_12441#1 TTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCA 1289 consensus_12441#2 TTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCA 351 ************************************************************ consensus_12441#0 ATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTT 1380 consensus_12441#1 ATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTT 1349 consensus_12441#2 ATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTT 411 ************************************************************ consensus_12441#0 GCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGA 1440 consensus_12441#1 GCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGA 1409 consensus_12441#2 GCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGA 471 ************************************************************ consensus_12441#0 AATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAG 1500 consensus_12441#1 AATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAG 1469 consensus_12441#2 AATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAG 531 ************************************************************ consensus_12441#0 AATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTG 1560 consensus_12441#1 AATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTG 1529 consensus_12441#2 AATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTG 591 ************************************************************ consensus_12441#0 TTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTT 1620 consensus_12441#1 TTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTT 1589 consensus_12441#2 TTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTT 651 ************************************************************ consensus_12441#0 GCCCTTTCGGAATATGAGAGAAACATT----GTACATTTGTACTGGGTNCCNCCAAAAAA 1676 consensus_12441#1 GCCCTTTCGGAATAAAAGAAAAAAAA-----AAAAACTCGAG------------------ 1626 consensus_12441#2 GCCCTTTCGGAATATGAGAGAAACATTGTCCAAAAAAAAAAAAA---------------- 695 ************** *** *** * * * consensus_12441#0 AAAA 1680 consensus_12441#1 ---- consensus_12441#2 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||