These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12445#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2258 fasta sequence [CCGCTGCTGAGGCTACTACACGTCCTGCGGGGGTTGATACTTTCTGGACGTCCTGCAATCGCTGCCGGATGCAGTATGAGTACTTGAGAATTTATCTTAACCATAATCTTCTGTGTCCAAACTGCCATCATGCATTCTTGGCAGTAGAGACTGGATTTCCTTGCAACGGGAGCAGTTCTTCATTCTCATGGTCAACCAAACAGCAGCCGCAGAATAACAATTCCACCAAGCATTCATATGGCTCGACAAGCAGGACTTCTAGCATTCCGGGGACAGGGCATGGGGGTTACCAGCAAGATGGTACTTATGATTCCTACAACAACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAACACCTGCAGCTGGTACAAATGCATACGGTACCCAGGCCTTGGAGAAACCGAAAAGGAAACATGAAGAGAGCTACAGTTACAACTATTCTGCTACTGGCAATTCATATGGCCATGAGAGAACTAATTCAAGGCGTGGCCGGTTTTCAAAGAGGAGAAGGCATAGTAATGATGGTTACACTACTATGGATTTTGGTGGAGATAACAGAGAAACTGTAGCTGCCAGCACAGAAACAACTGCTTTCACTGACGTGGCAGTGGCACAAGTCAATGGCACTTCAGGGGAAAAGTTGAGATCTGCAGTGAGTGGAAGAAGAGCAAACGTTTTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGCCATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGGAAAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTCTGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACCCAAGCACCTACGGTTGATGAAAAGAACCCGGAACAGA-GGCGTGTTCCGGTGTCAATTGATGTCCCAGATCCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGTATGGGCTACATATGATAGTGA-GGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGTTCTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGAACTGGCACCAATAAGCTGGGTTGCCTCTGGTTTTCAGAAGACATGTGGTGATTTCAGGGTTGGGAGATACCAGATTTCTGAAACAGTCAACATATTTTCGCACAAAGTCAGCTGGACTAAAGGCCCCCGTGGGATTATCAGGATCGTTCCTCAGAAAGGTGATACATGGGCTTTATACCGAAACTGGTCTCCTGACTGGAATGAGTTAACACCTGATGATGTGATATACAAGTATGAGATAGTAGAAATTATTGATGATTTCACTGATGAGCAAGGGCTGACAGTCATCCCATTGCTG-AAGGTTGCTGGTTTCAAAGCTGTGTTCCATAGGCATATGGATCCGAAAGAGGCCAGGAGGATACCAAAGGAAGAGCTTTTCCGATTCTCACATCGGG-TTCCTTCTCGCCTGCTGACTGGGGAAGAAGGCAA-CAATGCCCCAAAAGGTTGCCACGAGCTGGACCCTGCAGCAACTCCAG-TGGACCTTCTTAAGGTCATTACAG-AAGTTACGGAAGATACAGCAACACAACCTGCTAAG-TAGAAGAGGGC-AACTATGAACA-CTGAAGATAGCTT-GGATGTCTCAACTGTCAAATGCACTTCACTGAACTCAACATTTGTTGGTCACTTAAGTTCTAGTATGTCATCTTATTTTTGGCTGATGACTTGGAC-AACTCTACCAGGGCAA-GCAGCTTATGTCGCAGAATTC-TGACATAATTCTTAGGC-ATT-TTCTAACA-TTTT-GGTTTTAC-TGC-A-ATACGGATATCTTCCTGAGAGTAAAAGACTA-TTTGGAGGCCA-G-TTTTGG--CAATTGACGAGGCGACCAAGTGGTGCTTGCTGAGGCTATTAGTC-AACGGAAGCTAAGAAGCCTCATGAATCGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAGGTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTACCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCC-TTTAATCTATAGTAATTCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAATTCTGAGGACCAAAAAAAAAATTTTAAAAAAAAA] [+] EMBL AK063403 [CCGCTGCTGAGGCTACTACACGTCCTGCGGGGGTTGATACTTTCTGGACGTCCTGCAATCGCTGCCGGATGCAGTATGAGTACTTGAGAATTTATCTTAACCATAATCTTCTGTGTCCAAACTGCCATCATGCATTCTTGGCAGTAGAGACTGGATTTCCTTGCAACGGGAGCAGTTCTTCATTCTCATGGTCAACCAAACAGCAGCCGCAGAATAACAATTCCACCAAGCATTCATATGGCTCGACAAGCAGGACTTCTAGCATTCCGGGGACAGGGCATGGGGGTTACCAGCAAGATGGTACTTATGATTCCTACAACAACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAACACCTGCAGCTGGTACAAATGCATACGGTACCCAGGCCTTGGAGAAACCGAAAAGGAAACATGAAGAGAGCTACAGTTACAACTATTCTGCTACTGGCAATTCATATGGCCATGAGAGAACTAATTCAAGGCGTGGCCGGTTTTCAAAGAGGAGAAGGCATAGTAATGATGGTTACACTACTATGGATTTTGGTGGAGATAACAGAGAAACTGTAGCTGCCAGCACAGAAACAACTGCTTTCACTGACGTGGCAGTGGCACAAGTCAATGGCACTTCAGGGGAAAAGTTGAGATCTGCAGTGAGTGGAAGAAGAGCAAACGTTTTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGCCATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGGAAAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTCTGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACCCAAGCACCTACGGTTGATGAAAAGAACCCGGAACAGA GGCGTGTTCCGGTGTCAATTGATGTCCCAGATCCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGTATGGGCTACATATGATAGTGA GGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGTTCTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGAACTGGCACCAATAAGCTGGGTTGCCTCTGGTTTTCAGAAGACATGTGGTGATTTCAGGGTTGGGAGATACCAGATTTCTGAAACAGTCAACATATTTTCGCACAAAGTCAGCTGGACTAAAGGCCCCCGTGGGATTATCAGGATCGTTCCTCAGAAAGGTGATACATGGGCTTTATACCGAAACTGGTCTCCTGACTGGAATGAGTTAACACCTGATGATGTGATATACAAGTATGAGATAGTAGAAATTATTGATGATTTCACTGATGAGCAAGGGCTGACAGTCATCCCATTGCTG AAGGTTGCTGGTTTCAAAGCTGTGTTCCATAGGCATATGGATCCGAAAGAGGCCAGGAGGATACCAAAGGAAGAGCTTTTCCGATTCTCACATCGGG TTCCTTCTCGCCTGCTGACTGGGGAAGAAGGCAA CAATGCCCCAAAAGGTTGCCACGAGCTGGACCCTGCAGCAACTCCAG TGGACCTTCTTAAGGTCATTACAG AAGTTACGGAAGATACAGCAACACAACCTGCTAAG TAGAAGAGGGC AACTATGAACA CTGAAGATAGCTT GGATGTCTCAACTGTCAAATGCACTTCACTGAACTCAACATTTGTTGGTCACTTAAGTTCTAGTATGTCATCTTATTTTTGGCTGATGACTTGGAC AACTCTACCAGGGCAA GCAGCTTATGTCGCAGAATTC TGACATAATTCTTAGGC ATT TTCTAACA TTTT GGTTTTAC TGC A ATACGGATATCTTCCTGAGAGTAAAAGACTA TTTGGAGGCCA G TTTTGG CAATTGACGAGGCGACCAAGTGGTGCTTGCTGAGGCTATTAGTC AACGGAAGCTAAGAAGCCTCATGAATGGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAGGTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTACCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCC TTTAATCTATAGTAATTCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAAT ] [+] EMBL CB664912 [ tcGGCACGAG GACTGGATTTCCTTGC CCGTGAGCAGTTCTTCATTCTCATGGTCAACCAAACAGCAGCCGCAGAATAACAATTCCACCAAGCATTCATATGGCTCGACAAGCAGGACTTCTAGCATTCCGGGGACAGGGCATGGGGGTTACCAGCAAGATGGTACTTATGATTCCTACAACAACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAACACCTGCAGCTGGTACAAATGCATACGGTACCCAGGCCTTGGAGAAACCGAAAAGGAAACATGAAGAGAGCTACAGTTACAACTATTCTGCTACTGGCAATTCATATGGCCATGAGAGAACTAATTCAAGGCGTGGCCGGTTTTCAAAGAGGAGAAGGCATAGTAATGATGGTTACACTACTATGGATTTTGGTGGAGATAACAGAGAAACTGTAGCTGCCAGCACAGAAACAACTGCTTTCACTGACGTGGCAGTGGCACAAGTCAATGGCACTTCAGGGGAAAAGTTGAGATCTGCAGTGAGTGGAAGAAGAGCAAACGTTTTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGCCATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGGAAAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTCTGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACC ] [+] EMBL CB663384 [ CCTTGCAACGGGAGCAGTTCTTCATTCTCATGGTCAACCAAACAGCAGCCGCAGAATAACAATTCCACCAAGCATTCATATGGCTCGACAAGCAGGACTTCTAGCATTCCGGGGACAGGGCATGGGGGTTACCAGCAAGATGGTACTTATGATTCCTACAACAACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAACACCTGCAGCTGGTACAAATGCATACGGTACCCAGGCCTTGGAGAAACCGAAAAGGAAACATGAAGAGAGCTACAGTTACAACTATTCTGCTACTGGCAATTCATATGGCCATGAGAGAACTAATTCAAGGCGTGGCCGGTTTTCAAAGAGGAGAAGGCATAGTAATGATGGTTACACTACTATGGATTTTGGTGGAGATAACAGAGAAACTGTAGCTGCCAGCACAGAAACAACTGCTTTCACTGACGTGGCAGTGGCACAAGTCAATGGCACTTCAGGGGAAAAGTTGAGATCTGCAGTGAGTGGAAGAAGAGCAAACGTTTTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGCCATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGGAAAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTCTGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATA ] [+] EMBL CF324570 [ ACGTTTTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGCCATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGGAAAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTCTGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACCCAAGCACCTACGGTTGATGAAAAGAACCCGGAACAGAGGGCGTGTTCCGGTGTCAATTGATGTCCCAGATCCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGTATGGGCTACATATGATAGTGANGGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGTTCTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGAACTGGCACCA ] [+] EMBL CA766025 [ CTCTGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACCCAAGCACCTACGGTTGATGAAAAGAACCCGGAACAGA GGCGTGTTCCGGTGTCAATTGATGTCCCAGATCCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGTATGGGCTACATATGATAGTGA GGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGTTCTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGAACTGGCACCAATAAGCTGGGTTGCCTCTGGTTTTCAGAAGACATGTGGTGATTTCAGGGTTGGGAGATACCAGATTTCTGAAACAGTCAACATATTTTCGCACAAAGTCAGCTGGACTAAAGGCCCCCGTGGGATTATTAGGATCGTTCCTCAGAAAGGTGATACATGGGCTTTATACCGAAACTGGTCTCCTGACTGGAATGAGTTAACACCTGATGATGTGATATACAAGTATGAGATAGTAGAAGTTATTGATGATTTCACTGATGAGCAAGGGCTGACAGTCATCCCATTGCTGAAAGGTTGCTGGTTTCAAAGCTGTGNTCCATAGGCATATGGATCCGAAAGAGGCCAGGAGGATACCAAAGGAAGAGCTTTTNCGATTCTCACATCGGGNTTCCTTCTCGCCTGCTGACTGGGGNANAAAGCAACCAATGCCCCNAAAGGNTGCCACGAGCTGGACCCTGCAGCAACTTCGGNGGGACCTTNTTAAGGGCATTACAGAAAGTTACGGAAGATCCAGGAACACAACCTGGTTAG TAGAANAG ] [+] EMBL OSC18352 [ GGAACAGA GGCGTGTTCCGGTGTCAATTGATGTCCCAGATCCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGTATGGGCTACATATGATAGTGA GGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGTTCTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGAACTGGCACCAATAAGCTGGGTTGCCTCTGGTTTTCAGAAGACATGTGGTGATTTCAGGGTTGGGAGATACCAGATTTCTGAAACAGTCAACATATTT ] [-] EMBL CB664913 [ TTATTGATGATTTCACTGATGAGCAAGGGCTGACAGTCATCCCATTGCTG AAGGTTGCTGGTTTCAAAGCTGTGTTCCATAGGCATATGGATCCGAAAGAGGCCAGGAGGATACCAAAGGAAGAGCTTTTCCGATTCTCACATCGGG TTCCTTCTCGCCTGCTGACTGGGGAAGAAGGCAA CAATGCCCCAAAAGGTTGCCACGAGCTGGACCCTGCAGCAACTCCAG TGGACCTTCTTAAGGTCATTACAG AAGTTACGGAAGATACAGCAACACAACCTGCTAAG TAGAAGAGGGC AACTATGAACA CTGAAGATAGCTT GGATGTCTCAACTGTCAAATGCACTTCACTGAACTCAACATTTGTTGGTCACTTAAGTTCTAGTATGTCATCTTATTTTTGGCTGATGACTTGGAC AACTCTACCAGGGCAA GCAGCTTATGTCGCAGAATTC TGACATAATTCTTAGGC ATT TTCTAACA TTTT GGTTTTAC TGC A ATACGGATATCTTCCTGAGAGTAAAAGACTA TTTGGAGGCCA G TTTTGG CAATTGACGAGGCGACCAAGTGGTGCTTGCTGAGGCTATTAGTC ATCGGAAGCTAAGAAGCCTCATGAATCGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAGGTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTACCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCC TTTAATCTATAGTAATTCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAATTCTGAGG ] [-] EMBL CB663385 [ GGATCCGAAAGAGGCCAGGAGGATACCAAAGGAAGAGCTTTTCCGATTCTCACATCGGG TTCCTTCTCGCCTGCTGACTGGGGAAGAAGGCAA CAATGCCCCAAAAGGTTGCCACGAGCTGGACCCTGCAGCAACTCCAG TGGACCTTCTTAAGGTCATTACAG AAGTTACGGAAGATACAGCAACACAACCTGCTAAG TAGAAGAGGGC AACTATGAACA CTGAAGATAGCTT GGATGTCTCAACTGTCAAATGCACTTCACTGAACTCAACATTTGTTGGTCACTTAAGTTCTAGTATGTCATCTTATTTTTGGCTGATGACTTGGAC AACTCTACCAGGGCAA GCAGCTTATGTCGCAGAATTC TGACATAATTCTTAGGC ATT TTCTAACA TTTT GGTTTTAC TGC A ATACGGATATCTTCCTGAGAGTAAAAGACTA TTTGGAGGCCA G TTTTGG CAATTGACGAGGCGACCAAGTGGTGCTTGCTGAGGCTATTAGTC AACGGAAGCTAAGAAGCCTCATGAATCGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAGGTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTACCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCC TTTAATCTATAGTAATTCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAATTCTGAGG ] [+] EMBL BI810192 [ tTGCTAAGTTAGAAGAGGCCAAACTATGAACACCTGAAGATAGCTTGGGATGTCTCAACT TCAAATCCACTTCACTGAACTCAACATTT TT GTCACTTAAGTTCTAGTATGTCATCTTATTTTTGGCTGATGACTTGGACAAACTCTACCAGGGCAA CAGCTTATGTCGCAGAATTC TGACATAATTCTTAGGC ATT TTCTAACACTTTT GGTTTTAC TGC ACATACGGATATCTTCCTGAGAGTAAAAGACTA TTTGGA GCCA G TTTTGG CAATTGACGAGGCGACCAAGTGGTGCTTGCTGAGGCTATTAGTC AACGGAAGCTAAGAAGCCTCATGAATCGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAGGTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTACCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCC TTTAATCTATAGTAATTCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAATTCTGAGGACCAAAAAAAAAA ] [+] EMBL BI810964 [ ctTACCAGGGCAATGCAGCTTATGTCGCAGAATTCGTGACATAATTCTTAGGCAATTGTTCTAACACTTTTGGGTTTTACGTGCAA ATACGGATATCTTCCTGAGAGTAAAAGACTATTTTGGAGCCCACGTTTTTGGCACAATTGACGAGGCGACCAAGTGGTGCTTTCTGAGGCTATTAGTCAAACGGAAGCTAAGAAGCCTCATGAATCGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAGGTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTACCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCCATTTAATCTATAGTAATTCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAATTCTGAGGACCAGTTCGAAATTTTTAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||