These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12455#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 747 fasta sequence [AGGGCTAGCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGCCCCCGGCCCTCCCGCCGCCGCCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGCCGACGTGCTGGGC-GCCATC-AGCGGCGAGGTCGGCCAGGTGCCCGCCCAGCCGTGCTGCAGCCTCAT-CAGCGGCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCT-GCACGGCCATCAAGGCCAACGTGCT-CGGCGTCGTCGTCAACAT-CCCGGT-G-AAGC-T-G-AGCCTCC-TTG-TCAACT-AC-TGTGGC-AAGTG-CGT--CCCCAG-TGGCTA-CACCTGCGCTTAAACAAAC-TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC-GCCGC-CGCCTGTGC-ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG-TTGTTCTGTTTA] [+] EMBL CF325876 [AGGGCTAGCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCTTTTGCGCGTGCGGCAAATGCCCGACGCCGCCGCCCCCGGCCCTCCCGCCGCCGCCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGCCGACGTGCTGGGC GCCATC AGCGGCGAGGTCGGCCAGGTGCCCGCCCAGCCGTGCTGCAGCCTCAT CAGCGGCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCT GCACGGCCATCAAGGCCAACGTGCT CGGCGTCGTCGTCAACAT CCCGGT G AAGC T G AGCCTCC TTG TCAACT AC TGTGGC AAGTG CGT CCCCAG TGGCTA CACCTGCGCTTAAACAAAC TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC GCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCT ] [+] EMBL AU198065 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGCCCCCGGCCCTCCCGCCGCCGCCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGCCGACGTGCTGGGC GCCATC AGCGGCGAGGTCGGCCAGGTGCCCGCCCAGCCGTGCTGCAGCCTCAT CAGCGGCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCT GCACGGCCATCAAGGCCAACGTGCT CGGCGTCGTCGTCAACAT CCCGGT G AAGC T G AGCCTCC TTG TCAACT AC TGTGGC A ] [+] EMBL AU065893 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGG TGCGCGTGCGGCAAATGCCCGACGNCGNCGNCCCCGGCCCTCCCGNCGTCGACGNCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGNCGAC ] [+] EMBL AU096759 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGNCCCCGGCCCTCCCGCCGNCGNCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGNTCAAGTTC ] [+] EMBL AU066190 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGNCGNCGGCCCCGGCCCTCCCGNCGTCGNCGGCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGNTCAAGTTC ] [+] EMBL AU162301 [ CTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGCNCCCGGCCCTCCCGCCGCCGCCGNCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAANACGCTCAAGTTCNGGGGCTGCGCCGACGTGCTGGGCGGCCATCAAGCGG ] [+] EMBL AU030532 [ cgcCCCAGCCGTGCTGCAG CTCATCCAGCGNCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCTGGCACGGCCATCAAGGCCAACGTGCTCCGGCGTCGTCGTCAACATCCCCGGT G AAGC TGG AGCCTCC TTG TCAACT AC TGTGGC AAGTG CGTC CCCCAG TGGCTA CACCTGCGCTTAAACAAAC TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC GCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCGTTTGTTCTGTTTA] [+] EMBL AU198066 [ TCGTCAACAT CCCGGT G AAGC T G AGCCTCC TTG TCAACT AC TGTGGC AAGTG CGT CCCCAG TGGCTA CACCTGCGCTTAAACAAAC TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC GCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG TTGTTCTGTTTA] [+] EMBL AU096760 [ anCAT CCCGGTNGAAAGCTT GAAGCCTCCTTTGTTCAACTAACTTGTGGCAAAGTGCCGTACCCCCAGTTGGCTACCACCTGCGCTTAAACAAACNTTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCCNGCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG TTGTTCTGTTTA] [+] EMBL AU096767 [ CCGCCGCC GCCGCNCGCCTGTGCNACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG TTGTTCTGTTTA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||