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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12455#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 747 fasta sequence
[AGGGCTAGCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGCCCCCGGCCCTCCCGCCGCCGCCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGCCGACGTGCTGGGC-GCCATC-AGCGGCGAGGTCGGCCAGGTGCCCGCCCAGCCGTGCTGCAGCCTCAT-CAGCGGCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCT-GCACGGCCATCAAGGCCAACGTGCT-CGGCGTCGTCGTCAACAT-CCCGGT-G-AAGC-T-G-AGCCTCC-TTG-TCAACT-AC-TGTGGC-AAGTG-CGT--CCCCAG-TGGCTA-CACCTGCGCTTAAACAAAC-TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC-GCCGC-CGCCTGTGC-ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG-TTGTTCTGTTTA]
[+] EMBL CF325876 [AGGGCTAGCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCTTTTGCGCGTGCGGCAAATGCCCGACGCCGCCGCCCCCGGCCCTCCCGCCGCCGCCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGCCGACGTGCTGGGC GCCATC AGCGGCGAGGTCGGCCAGGTGCCCGCCCAGCCGTGCTGCAGCCTCAT CAGCGGCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCT GCACGGCCATCAAGGCCAACGTGCT CGGCGTCGTCGTCAACAT CCCGGT G AAGC T G AGCCTCC TTG TCAACT AC TGTGGC AAGTG CGT CCCCAG TGGCTA CACCTGCGCTTAAACAAAC TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC GCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCT ]
[+] EMBL AU198065 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGCCCCCGGCCCTCCCGCCGCCGCCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGCCGACGTGCTGGGC GCCATC AGCGGCGAGGTCGGCCAGGTGCCCGCCCAGCCGTGCTGCAGCCTCAT CAGCGGCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCT GCACGGCCATCAAGGCCAACGTGCT CGGCGTCGTCGTCAACAT CCCGGT G AAGC T G AGCCTCC TTG TCAACT AC TGTGGC A ]
[+] EMBL AU065893 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGG TGCGCGTGCGGCAAATGCCCGACGNCGNCGNCCCCGGCCCTCCCGNCGTCGACGNCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGCTCAAGTTCGGGGCCTGCGNCGAC ]
[+] EMBL AU096759 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGNCCCCGGCCCTCCCGCCGNCGNCGCCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGNTCAAGTTC ]
[+] EMBL AU066190 [ GCTAGCTCTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGNCGNCGGCCCCGGCCCTCCCGNCGTCGNCGGCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAACACGNTCAAGTTC ]
[+] EMBL AU162301 [ CTGATATCCTACACCGGCCTTAGCAAATAGCCATATATACCCTTAAGGATAAGCTCCATGGCATCCAAGATCCTCGTGTTTCTCTTGGCCATCAACCTCCTCTTCTTCACGACGGCCAATGCCTGCGGCTGCGCGTGCGGCAAATGCCCGACGCCGCCGCNCCCGGCCCTCCCGCCGCCGCCGNCTCCGACTCCAACTACTCCGTCCTACCATAACAAGTGCCCCGTGAANACGCTCAAGTTCNGGGGCTGCGCCGACGTGCTGGGCGGCCATCAAGCGG ]
[+] EMBL AU030532 [ cgcCCCAGCCGTGCTGCAG CTCATCCAGCGNCCTCGCCGACCTCGAGGCCGCCGTCTGCCTCTGGCACGGCCATCAAGGCCAACGTGCTCCGGCGTCGTCGTCAACATCCCCGGT G AAGC TGG AGCCTCC TTG TCAACT AC TGTGGC AAGTG CGTC CCCCAG TGGCTA CACCTGCGCTTAAACAAAC TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC GCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCGTTTGTTCTGTTTA]
[+] EMBL AU198066 [ TCGTCAACAT CCCGGT G AAGC T G AGCCTCC TTG TCAACT AC TGTGGC AAGTG CGT CCCCAG TGGCTA CACCTGCGCTTAAACAAAC TTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCC GCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG TTGTTCTGTTTA]
[+] EMBL AU096760 [ anCAT CCCGGTNGAAAGCTT GAAGCCTCCTTTGTTCAACTAACTTGTGGCAAAGTGCCGTACCCCCAGTTGGCTACCACCTGCGCTTAAACAAACNTTGATGCATATATATATGCGTGGCTATCTACACTCGTAGCCGCCGCCNGCCGC CGCCTGTGC ACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG TTGTTCTGTTTA]
[+] EMBL AU096767 [ CCGCCGCC GCCGCNCGCCTGTGCNACGCTTGCATAGTTGCATTTACGCTGCATTTATATGTGCATGCATGCATATATAGCTATACCACCGTTGATCTTCTGTCGCAAACGTTCCACCGCGGTTCTGCAGAACTAGAGCCGTTCCAGTCGATCGAGTGTACACTTATTGGTGTGTATTTGTTTCATAAATTTGCTACGGGTTTGATCG TTGTTCTGTTTA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||