These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12475#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 734 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACCAACTGCAAAACTACATTTCTTT-ACTTGTTTACTGGGGTATATACATCTATTTACACACTAGATTTCATTAAGATTTACCAAAAAGGAGCACACATCATGAAGACAGTGCTTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTG-AAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAG-CCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC-ACATACTC-CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT-CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA-ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGTGCTTCAGTTTATGGATGGTTTGAAGTGGCATGTACTAGTTTCATGAACTTATATAGCATACAATGGAAAATTGTAGCCATAAGCTACTGATGTGTG] [+] EMBL CF313446 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACCAACTGCAAAACTACATTTCTTT ACTTGTTTACTGGGGGATATACATCTATTTACACACTAAATTTCATTAAAATTTACCAAAAAGGAGCCCACATTATGAAAACAGGGCTTCTCAATAGCTAAAATATAGCTAGTGACTGGCTAAAATTGACTG AAACCATGCTAGTGCTACTCTTGGAATTACATGGCATTACGACAAAACTCACAACAG CCTGTTCCACCTTTTCCGAGGGCTTTCTCCTAAACAAGCACATC ACATACTC CATCACTGGTGCCTCACAAGGAAATGTGAACTTTT CCTCACCTGTGAATCCAAATTCATCCTC ] [+] EMBL CF300373 [ TTTTTTTGAACCAACTGCAAAACTACATTTCTTT ACTTGTTTACTGGGGTATATACATCTATTTACACACTAGATTTCATTAAGATTTACCAAAAAGGAGCACACATCATGAAGACAGTGCTTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTG AAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAG CCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCG ] [+] EMBL CF319834 [ TTTTTTGAACCAACTGCAAAACTACATTTCTTT ACTTGTTTACTGGGGTATATACATCTATTTACACACTAGATTTCATTAAGATTTACCAAAAAGGAGCACACATCGTGAAGACAGTGCTTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTG AAACCATGCTAGTGCTACTCTTGTAATTACTTGGCATTACGACAGAGCTCACAACAG CCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTC CATCACTGCTGCCT ACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGGTGGCTGATGAGCAGCGTAAGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTG ] [+] EMBL CB667155 [ AACCAACTGCAAAACTACA TTCTTTAAAATGTTTACTGGGGTATATACATCTATTTACACACTAAATTTCATTAAGATTTACCAAAAAGGAGCCCCCATCATGAAGACAGTGCTTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAAATTGACTG AAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAG CCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAACAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGGGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGT ] [-] EMBL CB667154 [ CAAAACTACATTTCTTT ACTTGTTTACTGGGGTATATACATCTATTTACACACTAGATTTCATTAAGATTTACCAAAAAGGAGCACACATCATGAAGACAGTGCTTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTG AAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAG CCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGT ] [-] EMBL CF298825 [ TGCTTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTGAAAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAGNCCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTCNCATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGTGCTTCAGTTTATG ] [-] EMBL CF319833 [ TTCTCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTGAAAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAGNCCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGGTGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGTGCTTCAGTTTAT ] [-] EMBL CF318268 [ TCAGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTGAAAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAGNCCTGTTCCACCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATCAACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGTGCTTCAGTTTATG ] [-] EMBL CF313445 [ AGTAGCTAAAATATAGCTAGTGACTGGCTAAGATTGACTG AAACCATGCTAGTGCTACTCTTGTAATTACATGGCATTACGACAGAGCTCACAACAG CCTG TCC CCTCTTCCGAGGGCTTTCTCCTAAGCAAGCACATC ACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTTCCCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACCCAGATATGTCAATGGAACCCCAANATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGTGCTTCAGTTTATGGATGGTTTGAAGTGGCATGTACTAGTTTCATGAACTTATATAGCATACAATGGAAAATTGTAGCCATAAGCTACTGATGTGTG] [-] EMBL CF300374 [ C ACATACTC CATCACTGCTGCCTCACAAGGAAGTGTGATCTTTT CCTCACCTGTGAATCCAAATTCATCCTCAGACAACCTTAGGAGTTCGCCAAACACAGTTGTACTCAGATATGTCAATGGAACCCCAA ATCGCTCTCCATCAGCTGTATAGATGATGCAGTGGCCCTTATCTGCGATGGCTGATGAGCAGCGTAGGTTGCCTTCTTTAGTTGCTCCCGTTATCGTCAGCCTCCGCCTCCCAAGAGCTGCCATATGTTGCCACTTCTTTGCCAGGTGAACTAGCCTCTTAGGATTGATCATGGTGTGTTTCTTCTGATGAGATGAGCTTTTGTTGTGAGTGTATTGGTGCTTCAGTTTATG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||