These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12480#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1387 fasta sequence [CGCCCTTCTCCTTCCAGGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCTAGTCCCACCGCCTCTCCTCTCGCTCTGCCTCCCCCATCAGGCCAGTAGCGCCCCCATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCA-ACACAGGTCCACGGCAACGCCGCGCATCTCGGCAGCGCACACATCGGCGGCGCATCTCGGCAGCGGCAAGCCGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAACACTGTGCTGATTTCAGTAATTGGATCCCTCAAATTGTGAAATGCTTGCCAAAGGGAGGAAAGTTGCTGGAAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGCGATTATTAAACATAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTTAAGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCAGACAACATAAGTGACTGTGAGAGGCTGTACAAGGCCTTTTTACAGGAAATTAATACTTTTGAGCTGCCTCTTCTTAAAAGCAAGGCTGTCGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACGAGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGATCTCAAGAAGCAACTGGAACAGAGC-AAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTCTTCATGTGGTCGAGGAACTGCAGATCTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTG-TTTCCACAAAGGCAGCTCTACATTATCTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTCTTGTCTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTACTGAACAATCGGCAATGATCTTCTTTGATGCAAGCTGAGGTAAAACCGTCTGCCCTGGAGAATTTGGGTACATAAAAAAAAAAAG] [+] EMBL AK059267 [CGCCCTTCTCCTTCCAGGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCTAGTCCCACCGCCTCTCCTCTCGCTCTGCCTCCCCCATCAGGCCAGTAGCGCCCCCATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCA ACACAGGTCCACGGCAACGCCGCGCATCTCGGCAGCGCACACATCGGCGGCGCATCTCGGCAGCGGCAAGCCGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAACACTGTGCTGATTTCAGTAATTGGATCCCTCAAATTGTGAAATGCTTGCCAAAGGGAGGAAAGTTGCTGGAAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGCGATTATTAAACATAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTTAAGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCAGACAACATAAGTGACTGTGAGAGGCTGTACAAGGCCTTTTTACAGGAAATTAATACTTTTGAGCTGCCTCTTCTTAAAAGCAAGGCTGTCGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACGAGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGATCTCAAGAAGCAACTGGAACAGAGC AAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTCTTCATGTGGTCGAGGAACTGCAGATCTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTG TTTCCACAAAGGCAGCTCTACATTATCTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTCTTGTCTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTACTGAACAATCGGCAATGATCTTCTTTGATGCAAGCTGAGGTAAAACCG ] [+] EMBL CB649234 [CGCCCCCCTCCTTCCAGGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCTAGTCCCACCGCCTCTCCTCTCGCTCTGGCTCCCCCATCAGGTCAGTAGCGCCCCCATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCAGACACAGGTCCACGGCAACGCCGCGCATCTCGGCAGCGCACACATCGGCGGCGCATCTCGGCAGCGGCAAGCCGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAACACTGTGCTGATTTCAGTAATTGGATCCCTCAAATTGTGAAATGCTTGCCAAAGGGAGGAAAGTTGCTGGAAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGCGATTATTAAACATAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTTAAGAAGCTTCATAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCAGACAACATAAATGACTGTGAGAGGCTGTACAAGGCCTTTTTACAGGAAATTAATACTTTTGAGCTGCCTCTTCTTAGAAGCAAGGCTGTCGTTGATGCAAACCTTACGGAGAAGGAGAGCTTCAACGAGCTGCACGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATA ] [-] EMBL CB651084 [ TTAGGGAGAAGGAGAGCTTCAACGAGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGATCTCAAGAAGCAACTGGAACAGAGC AAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTCTTCATGTGGTCGAGGAACTGCAGATCTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTG TTTCCACAAAGGCAGCTTTACATTATCTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTCTTGTTTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTAAAGGACAATCGGCAATGATCTTCTTT ] [-] EMBL CA762593 [ acaaggggGAGGATCTCAAGAAGCAACTGGAACAGAGC AAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAATCAGAAAAATGATTTCTNTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTNTGCTCTTCTTCTTCACGTGGTCGAGGAACTGCAGATCTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTG TTTCCACAAAGGCAGCTCTACATTATCTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTCTTGTCTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTACTGAACAATCGGCAATGATCTTCTTTGATGCAAGCTGAGGTAAAACCGTCTGCCCTGGAGAATTTGGGTACATAAAAAAAAAAAG] [+] EMBL OSS12419A [ TGGAACAGAGC AAAATTGAGAGGCAGCACAAAGAGGAGTGCGAA NAATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTCTTCATGTGGTCGAGGAACTGCAGATCTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGNAAAGCGAGTTGCATTCCTGTTTTCCACAAAGGCAGCTCTACATTATCTT GGGNCTATATAGCACTTAATCGCCTNGATGc ] [+] EMBL AU093416 [ ggaAACAGAGCAAAAATTGAGAGNCAGCACAAAGAGGNGTGCGAAGCAATCAGAAAAATGATTTCTTTGCAGCNTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGNGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTCTTCATGTGGTCGAGGAACTGCAGATCTCGATCGATGATGAGCAGAGGAGCATAGCNGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTG TTTCCACAAAGGCAGCTCTACATTATCTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTNGTAAGTTGTAATCGTGCCCTTTCTTGTCTGANGTAACAGAACATCATGGTNTTNACAaaantnaa ] [-] EMBL CF279069 [ TGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTCTTGTCTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATAAATGTTATTATTTACTGAACAAaaaa ] consensusID : consensus_12480#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1177 fasta sequence [CACTGCCCGACGGCACCCGGCCGCCGCCGCCGCCGCCTCCTCGACTCCTCCGCCCCGCCGCGTCGCACCCGACGACCGGACCGCCGTCTCCGCCTGCCGCCCGCACGGCCGCACCCGCACTGTGTTGATTTCGTTTATTGGATCCCTCGGATTGCAAAATGCTTGCCAAAGGGAGGAAAGTTGCTGGAAGGGGTGGAGACATGTCTGCACACTATGCATTTGGGCTGCAGGAAGATGATGCGATCATTAAACGTAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTAAAGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCTGACAACATAAGTGACTGTGAGAGGTTGTACAAGGCCTTTTTACAGGAAATTAATGCTTTTGTGTTGCCTCTTCTTAAGAGCAAGGCCGTGGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACGAGCTGCAAGACGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGAACTCAAAAAGAAACTGGAACAGAGCAGAATTGAGAGGCTGTACAAAGAGGAGTGCGAAGCGATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCGGAAACAGAGAAGCTCATCGCGGGTCTTGAGAAGGAGATTGCTAATTTGGAGGCCGAGAATACAGCATGTATAAGGACTCTGGAACTAAGGAAGAAGCAGCTTTCTCTTCTTCTTCATGTGGTCGAGGAATTGCAGATCTCAATCGAAGATGAGCAGAGGAGCATAGCGGATGAGCTGAGAGCTGGCGCTGAAGAGCAGCAGAACATGAGCACAGATGAAGGTAGCGGCGATGCTTCAGATGCCATGGCTTTAGACTGATCCTAGCAGAAAAGCGCGATGCCTGCCTAGTTCCACAAAGGCAGATACGTTTTCTTGTGGCTATATAGCACTTAATTGCCTTGGTTAGACTTGTAGGTTGCTTAATTACACCCTGACACATGATGACTCTCGTGTAGTTTTTTTTTTAGAGAGAAGGCCAGAGTCTCTCGTGTAGTTTCAGTTGTAATTTCAGTCCTAAGTTGTAATCGTGTGCCCTTTGTCTGAAGGAACAGAACATCATGGTGTGACATATACTCCTCCAGATTATTCCAACATGTATGGTTGTT] [+] EMBL AK063413 [CACTGCCCGACGGCACCCGGCCGCCGCCGCCGCCGCCTCCTCGACTCCTCCGCCCCGCCGCGTCGCACCCGACGACCGGACCGCCGTCTCCGCCTGCCGCCCGCACGGCCGCACCCGCACTGTGTTGATTTCGTTTATTGGATCCCTCGGATTGCAAAATGCTTGCCAAAGGGAGGAAAGTTGCTGGAAGGGGTGGAGACATGTCTGCACACTATGCATTTGGGCTGCAGGAAGATGATGCGATCATTAAACGTAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTAAAGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCTGACAACATAAGTGACTGTGAGAGGTTGTACAAGGCCTTTTTACAGGAAATTAATGCTTTTGTGTTGCCTCTTCTTAAGAGCAAGGCCGTGGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACGAGCTGCAAGACGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGAACTCAAAAAGAAACTGGAACAGAGCAGAATTGAGAGGCTGTACAAAGAGGAGTGCGAAGCGATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCGGAAACAGAGAAGCTCATCGCGGGTCTTGAGAAGGAGATTGCTAATTTGGAGGCCGAGAATACAGCATGTATAAGGACTCTGGAACTAAGGAAGAAGCAGCTTTCTCTTCTTCTTCATGTGGTCGAGGAATTGCAGATCTCAATCGAAGATGAGCAGAGGAGCATAGCGGATGAGCTGAGAGCTGGCGCTGAAGAGCAGCAGAACATGAGCACAGATGAAGGTAGCGGCGATGCTTCAGATGCCATGGCTTTAGACTGATCCTAGCAGAAAAGCGCGATGCCTGCCTAGTTCCACAAAGGCAGATACGTTTTCTTGTGGCTATATAGCACTTAATTGCCTTGGTTAGACTTGTAGGTTGCTTAATTACACCCTGACACATGATGACTCTCGTGTAGTTTTTTTTTTAGAGAGAAGGCCAGAGTCTCTCGTGTAGTTTCAGTTGTAATTTCAGTCCTAAGTTGTAATCGTGTGCCCTTTGTCTGAAGGAACAGAACATCATGGTGTGACATATACTCCTCCAGATTATTCCAACATGTATGGTTGTT] consensusID : consensus_12480#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 742 fasta sequence [GCTGTCGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACGAGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGATCTCAAGAAGCAACTGGAACAGAGCAAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAATCAGAAAAATGATTTTTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTTTTCATGTGGTCGAGGAACTGCAGATTTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCCCTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTGTTTCCACAAAGGCAGCTTTACATTATTTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTTTTGTTTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTACTGAACAATCGGCAATGATTTTCTTTGAAAAAAAAAAAAAAAAAAGA] [-] EMBL CB649235 [GCTGTCGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACGAGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGATCTCAAGAAGCAACTGGAACAGAGCAAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAATCAGAAAAATGATTTTTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATCTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTCTTTTTCATGTGGTCGAGGAACTGCAGATTTCGATCGATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCCCTGAAGAGCAGAAGATGAGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTGCATTCCTGTTTCCACAAAGGCAGCTTTACATTATTTTGGGGACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTCTTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTTTTGTTTGAGGTAACAGAACATCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTACTGAACAATCGGCAATGATTTTCTTTGAAAAAAAAAAAAAAAAAAGA] consensusID : consensus_12480#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 539 fasta sequence [GACGCCGCCGCCCTTCTCCTTCCGGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCTAGTCCCACCGCCTCTCCTCTCGCTCTGCCTCCCCCATCAGGCCAGTAGCGCCCCCATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCAACACAGGTCCACGGCAACGCCGCGCATCTCGGCAGCGCACACATCGGCGGCGCATCTCGGCAGCGGCAAGTCGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAAGGAGGAAAGTTGCTGGAAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGCGATTATTAAACATAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTTAAGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCAGACAACATAAGTGACTGTGAGAGGCTGTACAAGGCCTTTTTACAGGAAATTAATACTTTTGAG] [+] EMBL CF279068 [GACGCCGCCGCCCTTCTCCTTCCGGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCTAGTCCCACCGCCTCTCCTCTCGCTCTGCCTCCCCCATCAGGCCAGTAGCGCCCCCATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCAACACAGGTCCACGGCAACGCCGCGCATCTCGGCAGCGCACACATCGGCGGCGCATCTCGGCAGCGGCAAGTCGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAAGGAGGAAAGTTGCTGGAAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGCGATTATTAAACATAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTTAAGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCAGACAACATAAGTGACTGTGAGAGGCTGTACAAGGCCTTTTTACAGGAAATTAATACTTTTGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12480#0 ------------------------------------------------------------ consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 CACTGCCCGACGGCACCCGGCCGCCGCCGCCGCCGCCTCCTCGACTCCTCCGCCCCGCCG 60 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ------------------------------------------------------------ consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 CGTCGCACCCGACGACCGGACCGCCGTCTCCGCCTGCCGCCCGCACGGCCGCACCCGCAC 120 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ------------------------------------------------------------ consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 TGTGTTGATTTCGTTTATTGGATCCCTCGGATTGCAAAATGCTTGCCAAAGGGAGGAAAG 180 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ------------------------------------------------------------ consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 TTGCTGGAAGGGGTGGAGACATGTCTGCACACTATGCATTTGGGCTGCAGGAAGATGATG 240 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ------------------------------------------------------------ consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 CGATCATTAAACGTAGGCTTCTGACCAGGACAACAACTACCAGGGGTGAACCACCACTAA 300 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ------------------------------------------------------------ consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 AGAAGCTTCAGAAGAAGTTCATGTCCTTTGCCACTGAGGTTGAGAAGGATGCTGACAACA 360 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 -------------------------------------------------------CGCCC 5 consensus_12480#3 -----------------------------------------------GACGCCGCCGCCC 13 consensus_12480#1 TAAGTGACTGTGAGAGGTTGTACAAGGCCTTTTTACAGGAAATTAATGCTTTTGTGTTGC 420 consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 TTCTCCTTCCAGGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCT 65 consensus_12480#3 TTCTCCTTCC-GGTCTCGCCGCCGCCGACGCCGACGCCCAGGAGCTCGCCGTCCTCCGCT 72 consensus_12480#1 CTCTTCTTAAGAGCAAGGCCGTGGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACG 480 consensus_12480#2 -----------------GCTGTCGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTCAACG 43 ** * * ** ** ** **** * * ** * consensus_12480#0 AGTCCCACCGCCTCTCCTCTCGCTCTGCCTCCCCCA-TCAGGCCAGTAGCG----CCCCC 120 consensus_12480#3 AGTCCCACCGCCTCTCCTCTCGCTCTGCCTCCCCCA-TCAGGCCAGTAGCG----CCCCC 127 consensus_12480#1 AGCTGCAAGACGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGAACTCA 540 consensus_12480#2 AGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGATCTCA 103 ** ** ** ** * **** * ** * * * consensus_12480#0 ATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCAACACAGGTCCAC 180 consensus_12480#3 ATCCCTCTCTCGACCTGCTCCTCTCCTCTCGCCATCTCGCCAAATCCAACACAGGTCCAC 187 consensus_12480#1 AAAAGAAACTGGAACAGAGCAGAA--TTGAGAGGCTGTACAAAGAGGAGTGCGAAGCGAT 598 consensus_12480#2 AGAAGCAACTGGAACAGAGCAAAA--TTGAGAGGCAGCACAAAGAGGAGTGCGAAGCAAT 161 * ** ** * * * * * * ** * * * * consensus_12480#0 GGCAACGCCGCGCATCTCGGCAGCGCACAC-ATCGGCGGCGCATCTCGGCAGCGGCAAGC 239 consensus_12480#3 GGCAACGCCGCGCATCTCGGCAGCGCACAC-ATCGGCGGCGCATCTCGGCAGCGGCAAGT 246 consensus_12480#1 CAGAAAAATG-ATTTCTTTGCAGCCTCCACGATCGGAAACAGAGAAGCTCATCGCGGGTC 657 consensus_12480#2 CAGAAAAATG-ATTTTTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGATC 220 ** * * * ***** *** *** * * * ** * consensus_12480#0 CGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAACACTGTGCTGAT 299 consensus_12480#3 CGGCGACGAGCTGCAGCGCTTCAAAGCTTGATTACCCAAATACTACAA------------ 294 consensus_12480#1 TTGAGAAGGAGATTGCTAATTTGGAGGCCGAGAATACAGCATGTATAA------------ 705 consensus_12480#2 TTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAA------------ 268 * ** * ** ** ** * * ** ** consensus_12480#0 TTCAGTAATTGGATCCCTCAAATTGTGAAATGCTTGCCAAAGGGAGGAAAGTTGCTGG-- 357 consensus_12480#3 ------------------------------------------GGAGGAAAGTTGCTGG-- 310 consensus_12480#1 ------------------------GGACTCTGGAACTAAGGAAGAAGCAGCTTTCTCTTC 741 consensus_12480#2 ------------------------GGACCCTGGAACTAAGGAAGAAGCAGTTTGCTCTTC 304 ** * * ** ** consensus_12480#0 ------AAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGC 411 consensus_12480#3 ------AAGGGGCGGAGACATGTCTGCACACTATGCATTTGGGCCGCAGGAAGATGATGC 364 consensus_12480#1 TTCTTCATGTGGTCGAGGAATTGCAGATCTCAATCGAAGATGAGCAGAGGAGCATAGCG- 800 consensus_12480#2 TTTTTCATGTGGTCGAGGAACTGCAGATTTCGATCGATGATGAGCAGAGGAGCATAGCA- 363 * * ** *** * * * * ** * * * **** ** consensus_12480#0 GATTATTAAACATAGGCTTCTGACCAGGAC--AACAACTACCAGGGGTGAACCACCACTT 469 consensus_12480#3 GATTATTAAACATAGGCTTCTGACCAGGAC--AACAACTACCAGGGGTGAACCACCACTT 422 consensus_12480#1 GATGAGCTGAGAGCTGGCGCTGAAGAGCAGCAGAACATGAGCACAGATGAA--GGTAGCG 858 consensus_12480#2 GATGAGCTGAGAGCTGCCCCTGAAGAGCAG---AAGATGAGCATAGAGGAA--GTTAGCG 418 *** * * * * **** ** * * * * ** * *** * consensus_12480#0 AAGAAGCTTCAGAAGAAGTTCATGTCCTTTG-CCACTGAGGTTGAGAAGGATGCAGACAA 528 consensus_12480#3 AAGAAGCTTCAGAAGAAGTTCATGTCCTTTG-CCACTGAGGTTGAGAAGGATGCAGACAA 481 consensus_12480#1 GCGATGCTTCAGATGCCATGGCTTTAGACTGATC-------CTAGCAGAAAAGCGCGATG 911 consensus_12480#2 GCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATCCTAGCAGAAAAGCGAGTTG 478 * ******** * * * * ** * * * * ** consensus_12480#0 CATAAGTGACTGTG-AGAGGCTGTACAAGGCCTTTTTACAGGAAAT-TAATACTTTTGAG 586 consensus_12480#3 CATAAGTGACTGTG-AGAGGCTGTACAAGGCCTTTTTACAGGAAAT-TAATACTTTTGAG 539 consensus_12480#1 CCTGCCTAGTTCCACAAAGGCAGAT--ACGTTTTCTTGTGG-CTATATAGCACTTAATTG 968 consensus_12480#2 CATTCCTGTTTCCACAAAGGCAGCTTTACATTATTTTGGGGACTATATAGCACTGAATCG 538 * * * * * **** * * * ** * ** ** *** * consensus_12480#0 CTGCCTCTTCTTAAAAGCAAGGCTGTCGTTGATGCAAACCTTAGGGAGAAGGAGAGCTTC 646 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 CCTTGGTTAGACTTGTAGGTTGCTTAATTACACCCTGACACATGATGACTCTCGTGTAGT 1028 consensus_12480#2 CCTAGAT--GACTT--------------TGTACCCTGACTCATGATTATCATCA------ 576 consensus_12480#0 AACGAGCTGCAGGATGAGATTCAGCGACAAATCTTGCAAGCTCAGACTGATATTGAGGAT 706 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 TTTTTTTTTAGAGAGAAGGCCAGAGTCTCTCGTGTAGTTTCAGTTGTAATTTCAGTCCTA 1088 consensus_12480#2 ----------------------------CTCTTGTAATTTCA---------TCAGTAGTA 599 consensus_12480#0 CTCAAGAAGCAACTGGAACAGAGCAAAATTGAGAGGCAGCACAAAGAGGAGTGCGAAGCA 766 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 AGTTGTAATCGTGTGCCCTTT-GTCTGAAGGAACAGAACATCATGGTGT-GACATATACT 1146 consensus_12480#2 AGTTGTAATCGTGCCCTTTTTTGTTTGAGGTAACAGAACATCATGGTGTTGACATATGCG 659 consensus_12480#0 ATCAGAAAAATGATTTCTTTGCAGCCTCCACGATCAGAAACAGAAAAGCTCATTGCGGAT 826 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 CCTCCAGATTATTCCAACATGTATGGTTGTT----------------------------- 1177 consensus_12480#2 CCTCCAGAT---TCCAATATGTATGATTGTTATTATTTACTGAACAATCGGCAATGATTT 716 consensus_12480#0 CTTGAGAAGGAGATTGCTAATTTGGAGGCTGAGAATACTGCATGTATAAGGACCCTGGAA 886 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 TCTTTGAAAAAAAAAAAAAAAAAAGA---------------------------------- 742 consensus_12480#0 CTAAGGAAGAAGCAGTTTGCTCTTCTTCTTCATGTGGTCGAGGAACTGCAGATCTCGATC 946 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 GATGATGAGCAGAGGAGCATAGCAGATGAGCTGAGAGCTGCCACTGAAGAGCAGAAGATG 1006 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 AGCATAGAGGAAGTTAGCGGCGGTGCTTCAGATGCCATGGCTGTAGATTGATCGACGATC 1066 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 CTAGCAGAAAAGCGAGTTGCATTCCTGTTTCCACAAAGGCAGCTCTACATTATCTTGGGG 1126 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ACTATATAGCACTGAATCGCCTAGATGACTTTGTACCCTGACTCATGATTATCATCACTC 1186 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 TTGTAATTTCATCAGTAGTAAGTTGTAATCGTGCCCTTTCTTGTCTGAGGTAACAGAACA 1246 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 TCATGGTGTTGACATATGCGCCTCCAGATTCCAATATGTATGATTGTTATTATTTACTGA 1306 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 ACAATCGGCAATGATCTTCTTTGATGCAAGCTGAGGTAAAACCGTCTGCCCTGGAGAATT 1366 consensus_12480#3 ------------------------------------------------------------ consensus_12480#1 ------------------------------------------------------------ consensus_12480#2 ------------------------------------------------------------ consensus_12480#0 TGGGTACATAAAAAAAAAAAG 1387 consensus_12480#3 --------------------- consensus_12480#1 --------------------- consensus_12480#2 --------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||