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Oryza sativa
cluster # 12512 cluster # 12512       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12512#0 length = 1699 sequences # 9  
consensus_12512#1 length = 205 sequences # 1  

consensusID : consensus_12512#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1699
fasta sequence
                              [GCACCTAATTATTAGTAGCATACACACATATACCATAATGGCACTGTCACTGACGCCCTCCCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTGGAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTACCCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGGCCATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGACCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGAGTTCGCCGAGATCTTCGACATCATGGCCGGCGCCTTCTTCACCATGGACGGCGATCTCTACCGCCGGCAGCGTGCCAAGACCCATAGCATCCTCAGCGACCCGAGGATGGTTGCCTCGATGGCGTCGAGCTGTGTCGACAAGGTTCGGGATGGTCTCCTCCCGTTATTGACATCCATGGCGAGCACCCGGACACCGTTCGAGTTGCAGGATCTGGCCACGAGGCTCATGTTCGACGTGACGGCCATGACGGTGTTCGGCGTGGACCCTGGCCGCCTGTCCCCGGACATGCCGTCGATGCATGTCTCGGCTGCGATGGACACGATCATGGAGGTGGGGCTGTTCCGGCACACCGTGCCGCCGTCCTGCTGGAAGGCGATGAGACGGCTCAAGATTGGACCCGAGAGGAAGCTCGCCGCGGCGCACGCGGCGCTGCACGTCTTCGTCTCCGAGATGATGGAGAAGGCGAGGAAGCAAGAGGCAGCGCCATCCTCCATGTCCATGGACGTTCTCTCCTCCTACATCAACGACCCGGACTACGTCGGCCTCCTGCACTCCATCCTCATCACCTACATGGTCGCCGGGCGCGACACGGTGGGCACCACCTTGCCGTGGTTCTTCTATAACCTCGCCATGAACCCGCGCGTCGTGTCCGGCATCCGCGAAGAACTGGCACACAATATTGCAACAAGCACCTGCAATGGCGATGGCGTGCCGGTGATGTTCTCACCGGAGGACACGAAATCCCTCGTCTACCTGCACGCCGCGCTGTTCGAGACGCTCAGGCTGTACCCGCCGGGGTGGATCGAGCGGAAGACGGTGGTCGCCGACGACGTGATGCCGAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAGGATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGTGGCTGTACGACTCCC-G-CGGCGGCC-GG-AAAATGCGACACGTGCC-GTCGCA-CAAGTTCCTGTCGTTCAACTCCGGGCCGAGGATGTGCCCCG-GCAAGAA-CATCGCCGTGATGCAGATGAAGATCATCGCCGCCGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCTGTCGTGCCTTCTGCAGATGAAG-AACGGGGTCATGGTG-AAGGTGAAGAAGCGTGCTGTGTAACCGAG-TTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGTGTTCAAATATAAAAAAAAAAA]

[+] EMBL AK060990             [GCACCTAATTATTAGTAGCATACACACATATACCATAATGGCACTGTCACTGACGCCCTCCCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTGGAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTACCCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGGCCATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGACCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGAGTTCGCCGAGATCTTCGACATCATGGCCGGCGCCTTCTTCACCATGGACGGCGATCTCTACCGCCGGCAGCGTGCCAAGACCCATAGCATCCTCAGCGACCCGAGGATGGTTGCCTCGATGGCGTCGAGCTGTGTCGACAAGGTTCGGGATGGTCTCCTCCCGTTATTGACATCCATGGCGAGCACCCGGACACCGTTCGAGTTGCAGGATCTGGCCACGAGGCTCATGTTCGACGTGACGGCCATGACGGTGTTCGGCGTGGACCCTGGCCGCCTGTCCCCGGACATGCCGTCGATGCATGTCTCGGCTGCGATGGACACGATCATGGAGGTGGGGCTGTTCCGGCACACCGTGCCGCCGTCCTGCTGGAAGGCGATGAGACGGCTCAAGATTGGACCCGAGAGGAAGCTCGCCGCGGCGCACGCGGCGCTGCACGTCTTCGTCTCCGAGATGATGGAGAAGGCGAGGAAGCAAGAGGCAGCGCCATCCTCCATGTCCATGGACGTTCTCTCCTCCTACATCAACGACCCGGACTACGTCGGCCTCCTGCACTCCATCCTCATCACCTACATGGTCGCCGGGCGCGACACGGTGGGCACCACCTTGCCGTGGTTCTTCTATAACCTCGCCATGAACCCGCGCGTCGTGTCCGGCATCCGCGAAGAACTGGCACACAATATTGCAACAAGCACCTGCAATGGCGATGGCGTGCCGGTGATGTTCTCACCGGAGGACACGAAATCCCTCGTCTACCTGCACGCCGCGCTGTTCGAGACGCTCAGGCTGTACCCGCCGGGGTGGATCGAGCGGAAGACGGTGGTCGCCGACGACGTGATGCCGAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAGGATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGTGGCTGTACGACTCCC G CGGCGGCC GG AAAATGCGACACGTGCC GTCGCA CAAGTTCCTGTCGTTCAACTCCGGGCCGAGGATGTGCCCCG GCAAGAA CATCGCCGTGATGCAGATGAAGATCATCGCCGCCGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCTGTCGTGCCTTCTGCAGATGAAG AACGGGGTCATGGTG AAGGTGAAGAAGCGTGCTGTGTAACCGAG TTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGT                     ]
[+] EMBL AK104291             [   CCTAATTATTAGTAGCATACACACATATACCATAATGGCACTGTCACTGACGCCCTCCCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTGGAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTACCCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGGCCATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGACCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGAGTTCGCCGAGATCTTCGACATCATGGCCGGCGCCTTCTTCACCATGGACGGCGATCTCTACCGCCGGCAGCGTGCCAAGACCCATAGCATCCTCAGCGACCCGAGGATGGTTGCCTCGATGGCGTCGAGCTGTGTCGACAAGGTTCGGGATGGTCTCCTCCCGTTATTGACATCCATGGCGAGCACCCGGACACCGTTCGAGTTGCAGGATCTGGCCACGAGGCTCATGTTCGACGTGACGGCCATGACGGTGTTCGGCGTGGACCCTGGCCGCCTGTCCCCGGACATGCCGTCGATGCATGTCTCGGCTGCGATGGACACGATCATGGAGGTGGGGCTGTTCCGGCACACCGTGCCGCCGTCCTGCTGGAAGGCGATGAGACGGCTCAAGATTGGACCCGAGAGGAAGCTCGCCGCGGCGCACGCGGCGCTGCACGTCTTCGTCTCCGAGATGATGGAGAAGGCGAGGAAGCAAGAGGCAGCGCCATCCTCCATGTCCATGGACGTTCTCTCCTCCTACATCAACGACCCGGACTACGTCGGCCTCCTGCACTCCATCCTCATCACCTACATGGTCGCCGGGCGCGACACGGTGGGCACCACCTTGCCGTGGTTCTTCTATAACCTCGCCATGAACCCGCGCGTCGTGTCCGGCATCCGCGAAGAACTGGCACACAATATTGCAACAAGCACCTGCAATGGCGATGGCGTGCCGGTGATGTTCTCACCGGAGGACACGAAATCCCTCGTCTACCTGCACGCCGCGCTGTTCGAGACGCTCAGGCTGTACCCGCCGGGGTGGATCGAGCGGAAGACGGTGGTCGCCGACGACGTGATGCCGAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAGGATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGTGGCTGTACGACTCCC G CGGCGGCC GG AAAATGCGACACGTGCC GTCGCA CAAGTTCCTGTCGTTCAACTCCGGGCCGAGGATGTGCCCCG GCAAGAA CATCGCCGTGATGCAGATGAAGATCATCGCCGCCGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCTGTCGTGCCTTCTGCAGATGAAG AACGGGGTCATGGTG AAGGTGAAGAAGCGTGCTGTGTAACCGAG TTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGT                     ]
[+] EMBL OSS11171A            [                         ACATATACCATAATGGCACTGTCACTGACGCCCTCCCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTGGAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTACCCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGG CATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGACCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGAGTTCGCCGAGATCTTCGACATCATGGCCGGCGGCTTCTTCACCATGGACGGCGNTCTNTAACGGCGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSS11166A            [                         ACATATACCATAATGGCACTGTCACTGACGCCCTCCCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTGGAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTACCCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCC GNCATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGACCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGAGTTCGCCGAGATCTTCGACATCATGGCCGGCGGCTTCTTCAac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB681234             [                               ACCATACTGGCACTGTCACTGACGCCCTCCCTGCAAGATCTCGGATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTGGAGATCAAAGTATCAATCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTACCCTCGTCGCCAACCTGGACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGGCCATAACTTCACGGGGAACGGCCCGGCGGAGAGCAACATGCGACTGTTCGTCACATGTGACCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGAGTTCTCCGAGATCTTCGACATCATGGCCGGCGCCTTCTTCACCATGGACGGCGATCTCTACCGCCGGCAGCGTGCCAAGACCCATAGCATCCTCAGCGACCCAAGGATGGTTGCCTCGATGGCGTCGAGCTGTGTCGACAAGGTTCGGGATGGTCTCCTCCCGTTATTGACATCCATGGCGAGCACCCGGACACCGTTCGAGTTGCAGGATCTGGCCACGAGGCTCATGTTCGACGTGACAGCCATGACGGTGTTCGGCGAGGACCCTGGCCGCCTGTCCCCGGACATGCCGTCTATGCATGTCTCGGCTGCCATGGACACGATCATGGAGGAGGGGCTGTTCCGGCACACCGTGCCGCCGTCCTGCTGGAAAGCGATGAGACTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB681235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGCGTCGTGTCCGGCATCCGCGAAGAACTGGCACACAATATTGCAACAAGCACCTGCAATGGCGATGGCGTGCCGGTGATGTTCTCACCGGAGGACACGAAATCCCTCGTCTACCTGCACGCCGCGCTGTTCGAGACGCTCAGGCTGTACCCGCCGGGGTGGATCGAGCGGAAGACGGTGGTCGCCGACGACGTGATGCCGAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAGGATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGTGGCTGTACGACTCCC G CGGCGGCC GG AAAATGCGACACGTGCC GTCGCA CAAGTTCCTGTCGTTCAACTCCGGGCCGAGGATGTGCCCCG GCAAGAA CATCGCCGTGATGCAGATGAAGATCATCGCCGCCGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCTGTCGTGCCTTCTGCAGATGAAG AACGGGGTCATGGTG AAGGTGAAGAAGCGTGCTGTGTAACCGAG TTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGCCAGTATATATATGTATGCAAAGATTTCCTCCAAGGATAAAGGATGT                     ]
[+] EMBL BM421002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTCA GCTGTACCCCCCGGGGTGGATCGAGCGGAAGACGGT GTCGCCGACGACGTGATGCCGAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAGGATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGT GCTGTACGACTCCC G CGGCGGCC GG AAAATGCGACACGTGCCAGTCGCA CAAGTTCCTGTCGTTCAACTCCGGGCCGAGGATGTGCCCCG GCAAGAA CATCGCCGTGATGCAGATGAAGATCATCGCCGCCGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCTGTCGTGCCTTCTGCAGATGAAGAAACGGGGTCATGGTGAAAGGTGAAGAAGCGTGCTGTGTAACCGAGTTTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGTGTTCAAATAAAAAA       ]
[+] EMBL BI810846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCTCGATCTACTCCATGGGCAGGATGGAGAGCCTGTGGGGGGATGACTGCCGGGTGTACCGGCCGGAGAGGTGTCTGTACGACTCCC GCCGGCGGCCAGG AAAATGCGACACGTGCC GTCGCA CAAGTTCCTGTCGTTCAACTCC GGCCGAGGATGTGCCCCG GCAAGAA CATC CCGTGAT CAGATGAAGATCATCGCCGCACCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGT CCGAAGCTGTCGTGCCTTCTGCAGATGAAG AACGGGGTCATGGTG AAGGTGAAGAAGCGTGCTGTGTAACCGAG TTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGTGTTCAAATATAAAAAAAAAA ]
[+] EMBL AU086015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGCTGTACGACTCCCNG CGGCGGCC GGNAAAATGCGACAC TGCC GTCGCATCAAGTTCCTGTCGTTCAACTCCGGGCCGAGGATGTGCCCCGNGCAAGAANCATCGCCGTGATGCAGATGAAGATCATCGCCGCCGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCTGTCGTGCCTTCTGCAGATGAAG AACGGGGTCATGGTG AAGGTGAAGAAGCGTGCTGTGTAACCGAG TTATTANTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGTGTTCAAATATATATTAAAAAA]


>consensus_12512#0 GCACCTAATTATTAGTAGCATACACACATATACCATAATGGCACTGTCACTGACGCCCTC CCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTG GAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTAC CCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGG CCATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGA CCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGA GTTCGCCGAGATCTTCGACATCATGGCCGGCGCCTTCTTCACCATGGACGGCGATCTCTA CCGCCGGCAGCGTGCCAAGACCCATAGCATCCTCAGCGACCCGAGGATGGTTGCCTCGAT GGCGTCGAGCTGTGTCGACAAGGTTCGGGATGGTCTCCTCCCGTTATTGACATCCATGGC GAGCACCCGGACACCGTTCGAGTTGCAGGATCTGGCCACGAGGCTCATGTTCGACGTGAC GGCCATGACGGTGTTCGGCGTGGACCCTGGCCGCCTGTCCCCGGACATGCCGTCGATGCA TGTCTCGGCTGCGATGGACACGATCATGGAGGTGGGGCTGTTCCGGCACACCGTGCCGCC GTCCTGCTGGAAGGCGATGAGACGGCTCAAGATTGGACCCGAGAGGAAGCTCGCCGCGGC GCACGCGGCGCTGCACGTCTTCGTCTCCGAGATGATGGAGAAGGCGAGGAAGCAAGAGGC AGCGCCATCCTCCATGTCCATGGACGTTCTCTCCTCCTACATCAACGACCCGGACTACGT CGGCCTCCTGCACTCCATCCTCATCACCTACATGGTCGCCGGGCGCGACACGGTGGGCAC CACCTTGCCGTGGTTCTTCTATAACCTCGCCATGAACCCGCGCGTCGTGTCCGGCATCCG CGAAGAACTGGCACACAATATTGCAACAAGCACCTGCAATGGCGATGGCGTGCCGGTGAT GTTCTCACCGGAGGACACGAAATCCCTCGTCTACCTGCACGCCGCGCTGTTCGAGACGCT CAGGCTGTACCCGCCGGGGTGGATCGAGCGGAAGACGGTGGTCGCCGACGACGTGATGCC GAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAG GATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGTGGCTGTACGA CTCCCGCGGCGGCCGGAAAATGCGACACGTGCCGTCGCACAAGTTCCTGTCGTTCAACTC CGGGCCGAGGATGTGCCCCGGCAAGAACATCGCCGTGATGCAGATGAAGATCATCGCCGC CGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCT GTCGTGCCTTCTGCAGATGAAGAACGGGGTCATGGTGAAGGTGAAGAAGCGTGCTGTGTA ACCGAGTTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCT TTTATCATCCGACAGTATATATATGTATGCAAAGATTTCCTACTTGAATAAAGGATGTGT TCAAATATAAAAAAAAAAA



consensusID : consensus_12512#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 205
fasta sequence
                              [GCAGATGAAGAACGGGGTCATGGTGAAGGTGAAGAAGCGTGCTGTGTAACCGAGTTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCANANAGGATTTCCTNACTTGAATAANAGGATGTGTTCAGAGATNATNATGATTNAAAAAAAAAAANA]

[+] EMBL AU095825             [GCAGATGAAGAACGGGGTCATGGTGAAGGTGAAGAAGCGTGCTGTGTAACCGAGTTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGACAGTATATATATGTATGCANANAGGATTTCCTNACTTGAATAANAGGATGTGTTCAGAGATNATNATGATTNAAAAAAAAAAANA]


>consensus_12512#1 GCAGATGAAGAACGGGGTCATGGTGAAGGTGAAGAAGCGTGCTGTGTAACCGAGTTATTA CTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCTTTTATCATCCGA CAGTATATATATGTATGCANANAGGATTTCCTNACTTGAATAANAGGATGTGTTCAGAGA TNATNATGATTNAAAAAAAAAAANA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12512#0      GCACCTAATTATTAGTAGCATACACACATATACCATAATGGCACTGTCACTGACGCCCTC 60
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CCTGCAAGATCTCGTATCATCACTGATGATACTCCTTGTTCTCTTGTACATATCGTACTG 120
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GAGATCAAAGTATCAGTCCTTGTTCCCAGTGGACTGGCCGATAGTAGGATTGCTCCCTAC 180
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CCTCGTCGCCAACCTGCACCGCTTGCATGACAAAATCACCGAATACCTCGCCGCCTCCGG 240
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CCATAGCTTCACGGGGAACGGCCCGGCGGCGAGCAACATGCGACTGTTCGTCACATGTGA 300
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CCCTGACAATGTCCGGCACATCTTCACCACCAACCATGACAACTACCCCAAGGGCCACGA 360
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GTTCGCCGAGATCTTCGACATCATGGCCGGCGCCTTCTTCACCATGGACGGCGATCTCTA 420
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CCGCCGGCAGCGTGCCAAGACCCATAGCATCCTCAGCGACCCGAGGATGGTTGCCTCGAT 480
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GGCGTCGAGCTGTGTCGACAAGGTTCGGGATGGTCTCCTCCCGTTATTGACATCCATGGC 540
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GAGCACCCGGACACCGTTCGAGTTGCAGGATCTGGCCACGAGGCTCATGTTCGACGTGAC 600
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GGCCATGACGGTGTTCGGCGTGGACCCTGGCCGCCTGTCCCCGGACATGCCGTCGATGCA 660
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      TGTCTCGGCTGCGATGGACACGATCATGGAGGTGGGGCTGTTCCGGCACACCGTGCCGCC 720
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GTCCTGCTGGAAGGCGATGAGACGGCTCAAGATTGGACCCGAGAGGAAGCTCGCCGCGGC 780
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GCACGCGGCGCTGCACGTCTTCGTCTCCGAGATGATGGAGAAGGCGAGGAAGCAAGAGGC 840
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      AGCGCCATCCTCCATGTCCATGGACGTTCTCTCCTCCTACATCAACGACCCGGACTACGT 900
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CGGCCTCCTGCACTCCATCCTCATCACCTACATGGTCGCCGGGCGCGACACGGTGGGCAC 960
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CACCTTGCCGTGGTTCTTCTATAACCTCGCCATGAACCCGCGCGTCGTGTCCGGCATCCG 1020
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CGAAGAACTGGCACACAATATTGCAACAAGCACCTGCAATGGCGATGGCGTGCCGGTGAT 1080
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GTTCTCACCGGAGGACACGAAATCCCTCGTCTACCTGCACGCCGCGCTGTTCGAGACGCT 1140
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CAGGCTGTACCCGCCGGGGTGGATCGAGCGGAAGACGGTGGTCGCCGACGACGTGATGCC 1200
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GAGCGGGCACGAGGTACGTGCCGGCGACGCCGTGCTCATCTCGATCTACTCCATGGGCAG 1260
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GATGGAGAGCCTGTGGGGGGAGGACTGCCGGGTGTACCGGCCGGAGAGGTGGCTGTACGA 1320
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CTCCCGCGGCGGCCGGAAAATGCGACACGTGCCGTCGCACAAGTTCCTGTCGTTCAACTC 1380
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CGGGCCGAGGATGTGCCCCGGCAAGAACATCGCCGTGATGCAGATGAAGATCATCGCCGC 1440
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      CGCCGTGGTGTGGAACTTCGACTTGGAGGTGGTGGAAGGGCAGGCCGTGGTGCCGAAGCT 1500
consensus_12512#1      ------------------------------------------------------------
                                                                                   

consensus_12512#0      GTCGTGCCTTCTGCAGATGAAGAACGGGGTCATGGTGAAGGTGAAGAAGCGTGCTGTGTA 1560
consensus_12512#1      ------------GCAGATGAAGAACGGGGTCATGGTGAAGGTGAAGAAGCGTGCTGTGTA 48
                                   ************************************************

consensus_12512#0      ACCGAGTTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCT 1620
consensus_12512#1      ACCGAGTTATTACTACGTTCTCAGGAAGGCATGCGTGCGAGTGCGACAGGCTCAGTGTCT 108
                       ************************************************************

consensus_12512#0      TTTATCATCCGACAGTATATATATGTATGCAAAGA----TTTCCTACTTGAATAAA-GGA 1675
consensus_12512#1      TTTATCATCCGACAGTATATATATGTATGCANANAGGATTTCCTNACTTGAATAANAGGA 168
                       ******************************* * *    ** *  **********  ***

consensus_12512#0      TGTGTTCAAATATAAAAA-----AAAAAA-------- 1699
consensus_12512#1      TGTGTTCAGAGATNATNATGATTNAAAAAAAAAAANA 205
                       ******** * ** *  *      *****        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)